RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 DAPK1P53355 1430 aa12.79□□□□□ -0.36
SLC46A1-201ENST00000578217 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
SLC46A1-201ENST00000578217 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
SLC46A1-201ENST00000578217 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
SLC46A1-201ENST00000578217 XRN1Q8IZH2 1706 aaKnown RBP12.79□□□□□ -0.36
SLC46A1-201ENST00000578217 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
SLC46A1-201ENST00000578217 ZNF692Q9BU19 519 aaPredicted RBP12.78□□□□□ -0.36
SLC46A1-201ENST00000578217 PIK3R4Q99570 1358 aa12.78□□□□□ -0.36
SLC46A1-201ENST00000578217 UNC13BO14795 1591 aa12.77□□□□□ -0.36
SLC46A1-201ENST00000578217 NRXN3Q9Y4C0 1643 aa12.77□□□□□ -0.36
SLC46A1-201ENST00000578217 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.37
SLC46A1-201ENST00000578217 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
SLC46A1-201ENST00000578217 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
SLC46A1-201ENST00000578217 LRP5O75197 1615 aa12.77□□□□□ -0.37
SLC46A1-201ENST00000578217 BCL9LQ86UU0 1499 aa12.76□□□□□ -0.37
SLC46A1-201ENST00000578217 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
SLC46A1-201ENST00000578217 METP08581 1390 aa12.75□□□□□ -0.37
SLC46A1-201ENST00000578217 RPRD2Q5VT52 1461 aaKnown RBP12.75□□□□□ -0.37
SLC46A1-201ENST00000578217 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
SLC46A1-201ENST00000578217 FKBP8Q14318 412 aa12.74□□□□□ -0.37
SLC46A1-201ENST00000578217 LAMC1P11047 1609 aa12.73□□□□□ -0.37
SLC46A1-201ENST00000578217 C1orf167Q5SNV9 1468 aa12.73□□□□□ -0.37
SLC46A1-201ENST00000578217 ADGRL3Q9HAR2 1447 aa12.73□□□□□ -0.37
SLC46A1-201ENST00000578217 CCDC125Q86Z20 511 aa12.73□□□□□ -0.37
SLC46A1-201ENST00000578217 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
SLC46A1-201ENST00000578217 ORAI2Q96SN7 254 aa12.73□□□□□ -0.37
SLC46A1-201ENST00000578217 ANKRD30AQ9BXX3 1397 aa12.72□□□□□ -0.37
SLC46A1-201ENST00000578217 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
SLC46A1-201ENST00000578217 SOS2Q07890 1332 aaPredicted RBP12.72□□□□□ -0.37
SLC46A1-201ENST00000578217 PSDA5PKW4 1024 aaPredicted RBP12.72□□□□□ -0.37
SLC46A1-201ENST00000578217 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
SLC46A1-201ENST00000578217 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.37
SLC46A1-201ENST00000578217 GLI3P10071 1580 aa12.71□□□□□ -0.37
SLC46A1-201ENST00000578217 MYOM2P54296 1465 aa12.71□□□□□ -0.38
SLC46A1-201ENST00000578217 PTCH1Q13635 1447 aa12.71□□□□□ -0.38
SLC46A1-201ENST00000578217 VPS8Q8N3P4 1428 aa12.71□□□□□ -0.38
SLC46A1-201ENST00000578217 E9PCH4 1651 aa12.7□□□□□ -0.38
SLC46A1-201ENST00000578217 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
SLC46A1-201ENST00000578217 HRCP23327 699 aa12.69□□□□□ -0.38
SLC46A1-201ENST00000578217 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
SLC46A1-201ENST00000578217 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
SLC46A1-201ENST00000578217 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
SLC46A1-201ENST00000578217 RALGAPBQ86X10 1494 aa12.67□□□□□ -0.38
SLC46A1-201ENST00000578217 ADGRL2O95490 1459 aa12.66□□□□□ -0.38
SLC46A1-201ENST00000578217 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
SLC46A1-201ENST00000578217 ANKRD50Q9ULJ7 1429 aa12.66□□□□□ -0.38
SLC46A1-201ENST00000578217 PROM2Q8N271 834 aa12.66□□□□□ -0.38
SLC46A1-201ENST00000578217 XPCQ01831 940 aaPredicted RBP12.65□□□□□ -0.38
SLC46A1-201ENST00000578217 ROBO2Q9HCK4 1378 aa12.63□□□□□ -0.39
SLC46A1-201ENST00000578217 PXDNQ92626 1479 aa12.63□□□□□ -0.39
SLC46A1-201ENST00000578217 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
SLC46A1-201ENST00000578217 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
SLC46A1-201ENST00000578217 SLIT2O94813 1529 aa12.62□□□□□ -0.39
SLC46A1-201ENST00000578217 UNC5CLQ8IV45 518 aa12.6□□□□□ -0.39
SLC46A1-201ENST00000578217 IQGAP3Q86VI3 1631 aa12.59□□□□□ -0.39
SLC46A1-201ENST00000578217 SPHKAPQ2M3C7 1700 aa12.59□□□□□ -0.39
SLC46A1-201ENST00000578217 FOXO3O43524 673 aa12.58□□□□□ -0.4
SLC46A1-201ENST00000578217 R3HDM1Q15032 1099 aaKnown RBP12.58□□□□□ -0.4
SLC46A1-201ENST00000578217 NEXMIFQ5QGS0 1516 aa12.57□□□□□ -0.4
SLC46A1-201ENST00000578217 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
SLC46A1-201ENST00000578217 YY1P25490 414 aa12.57□□□□□ -0.4
SLC46A1-201ENST00000578217 SF3B2Q13435 895 aaKnown RBP12.57□□□□□ -0.4
SLC46A1-201ENST00000578217 EN1Q05925 392 aaPredicted RBP12.56□□□□□ -0.4
SLC46A1-201ENST00000578217 HAX1O00165 279 aa12.55□□□□□ -0.4
SLC46A1-201ENST00000578217 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
SLC46A1-201ENST00000578217 ZNF326Q5BKZ1 582 aaKnown RBP12.55□□□□□ -0.4
SLC46A1-201ENST00000578217 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
SLC46A1-201ENST00000578217 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
SLC46A1-201ENST00000578217 ONECUT3O60422 494 aaPredicted RBP12.54□□□□□ -0.4
SLC46A1-201ENST00000578217 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
SLC46A1-201ENST00000578217 FAM50AQ14320 339 aaKnown RBP12.54□□□□□ -0.4
SLC46A1-201ENST00000578217 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
SLC46A1-201ENST00000578217 NPHP3Q7Z494 1330 aa12.54□□□□□ -0.4
SLC46A1-201ENST00000578217 USP32Q8NFA0 1604 aa12.54□□□□□ -0.4
SLC46A1-201ENST00000578217 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
SLC46A1-201ENST00000578217 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
SLC46A1-201ENST00000578217 PLEKHG5O94827 1062 aa12.52□□□□□ -0.41
SLC46A1-201ENST00000578217 BAG6P46379 1132 aa12.52□□□□□ -0.41
SLC46A1-201ENST00000578217 VPS72Q15906 364 aa12.52□□□□□ -0.41
SLC46A1-201ENST00000578217 NUP155O75694 1391 aa12.52□□□□□ -0.41
SLC46A1-201ENST00000578217 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
SLC46A1-201ENST00000578217 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
SLC46A1-201ENST00000578217 SPATA31A3Q5VYP0 1347 aa12.51□□□□□ -0.41
SLC46A1-201ENST00000578217 PRAG1Q86YV5 1406 aa12.51□□□□□ -0.41
SLC46A1-201ENST00000578217 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
SLC46A1-201ENST00000578217 TNS1Q9HBL0 1735 aaKnown RBP12.49□□□□□ -0.41
SLC46A1-201ENST00000578217 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
SLC46A1-201ENST00000578217 EVX2Q03828 476 aa12.48□□□□□ -0.41
SLC46A1-201ENST00000578217 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
SLC46A1-201ENST00000578217 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
SLC46A1-201ENST00000578217 NAIPQ13075 1403 aa12.47□□□□□ -0.41
SLC46A1-201ENST00000578217 FAM83GA6ND36 823 aa12.47□□□□□ -0.41
SLC46A1-201ENST00000578217 ABCA3Q99758 1704 aa12.47□□□□□ -0.41
SLC46A1-201ENST00000578217 NWD2Q9ULI1 1742 aa12.47□□□□□ -0.41
SLC46A1-201ENST00000578217 HFM1A2PYH4 1435 aa12.46□□□□□ -0.41
SLC46A1-201ENST00000578217 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
SLC46A1-201ENST00000578217 WAPLQ7Z5K2 1190 aa12.46□□□□□ -0.41
SLC46A1-201ENST00000578217 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
SLC46A1-201ENST00000578217 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
SLC46A1-201ENST00000578217 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms