RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
ERBB2-205ENST00000578199 TRMT2AQ8IZ69 625 aaKnown RBP23.03■■□□□ 1.28
ERBB2-205ENST00000578199 SLC52A1Q9NWF4 448 aa23.03■■□□□ 1.28
ERBB2-205ENST00000578199 POLR3AO14802 1390 aaPredicted RBP23.02■■□□□ 1.28
ERBB2-205ENST00000578199 TULP4Q9NRJ4 1543 aa23.02■■□□□ 1.28
ERBB2-205ENST00000578199 ARHGEF28Q8N1W1 1705 aaKnown RBP23.02■■□□□ 1.28
ERBB2-205ENST00000578199 MTHFSP49914 203 aa23.01■■□□□ 1.27
ERBB2-205ENST00000578199 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
ERBB2-205ENST00000578199 BCAR3O75815 825 aa23■■□□□ 1.27
ERBB2-205ENST00000578199 CGNL1Q0VF96 1302 aa22.99■■□□□ 1.27
ERBB2-205ENST00000578199 TSPOAP1O95153 1857 aa22.98■■□□□ 1.27
ERBB2-205ENST00000578199 TCERG1O14776 1098 aaKnown RBP22.98■■□□□ 1.27
ERBB2-205ENST00000578199 PAK3O75914 559 aaPredicted RBP22.97■■□□□ 1.27
ERBB2-205ENST00000578199 SRPK2P78362 688 aaKnown RBP22.97■■□□□ 1.27
ERBB2-205ENST00000578199 PREX1Q8TCU6 1659 aa22.97■■□□□ 1.27
ERBB2-205ENST00000578199 WWC1Q8IX03 1113 aa22.97■■□□□ 1.27
ERBB2-205ENST00000578199 MINK1Q8N4C8 1332 aaPredicted RBP22.96■■□□□ 1.27
ERBB2-205ENST00000578199 E9PSI1 815 aa22.96■■□□□ 1.27
ERBB2-205ENST00000578199 SHPRHQ149N8 1683 aa22.95■■□□□ 1.27
ERBB2-205ENST00000578199 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
ERBB2-205ENST00000578199 PDE4AP27815 886 aa22.95■■□□□ 1.26
ERBB2-205ENST00000578199 PRAM1Q96QH2 718 aa22.95■■□□□ 1.26
ERBB2-205ENST00000578199 TMEM131LA2VDJ0 1609 aa22.94■■□□□ 1.26
ERBB2-205ENST00000578199 NPM2Q86SE8 214 aaKnown RBP22.94■■□□□ 1.26
ERBB2-205ENST00000578199 ANKRD36BQ8N2N9 1353 aa22.94■■□□□ 1.26
ERBB2-205ENST00000578199 STAG3Q9UJ98 1225 aa22.93■■□□□ 1.26
ERBB2-205ENST00000578199 ANP32AP39687 249 aaKnown RBP22.93■■□□□ 1.26
ERBB2-205ENST00000578199 MLECQ14165 292 aa22.93■■□□□ 1.26
ERBB2-205ENST00000578199 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.93■■□□□ 1.26
ERBB2-205ENST00000578199 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
ERBB2-205ENST00000578199 NOP58Q9Y2X3 529 aaKnown RBP22.92■■□□□ 1.26
ERBB2-205ENST00000578199 RUNDC1Q96C34 613 aa22.91■■□□□ 1.26
ERBB2-205ENST00000578199 ZFYVE9O95405 1425 aa22.91■■□□□ 1.26
ERBB2-205ENST00000578199 POGKQ9P215 609 aa22.91■■□□□ 1.26
ERBB2-205ENST00000578199 RIMBP3CA6NJZ7 1639 aa22.91■■□□□ 1.26
ERBB2-205ENST00000578199 RIMBP3BA6NNM3 1639 aa22.91■■□□□ 1.26
ERBB2-205ENST00000578199 RIMBP3Q9UFD9 1639 aa22.91■■□□□ 1.26
ERBB2-205ENST00000578199 GGNBP2Q9H3C7 697 aa22.9■■□□□ 1.26
ERBB2-205ENST00000578199 A0A1W2PP64 1363 aa22.9■■□□□ 1.26
ERBB2-205ENST00000578199 PUS7Q96PZ0 661 aaKnown RBP22.89■■□□□ 1.26
ERBB2-205ENST00000578199 KDM2BQ8NHM5 1336 aa22.89■■□□□ 1.25
ERBB2-205ENST00000578199 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.25
ERBB2-205ENST00000578199 BACH2Q9BYV9 841 aa22.89■■□□□ 1.25
ERBB2-205ENST00000578199 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
ERBB2-205ENST00000578199 DIP2BQ9P265 1576 aa22.87■■□□□ 1.25
ERBB2-205ENST00000578199 USP32Q8NFA0 1604 aa22.87■■□□□ 1.25
ERBB2-205ENST00000578199 PTPRMP28827 1452 aa22.87■■□□□ 1.25
ERBB2-205ENST00000578199 YTHDC2Q9H6S0 1430 aaKnown RBP22.87■■□□□ 1.25
ERBB2-205ENST00000578199 U2AF1L5P0DN76 240 aaPredicted RBP22.86■■□□□ 1.25
ERBB2-205ENST00000578199 U2AF1Q01081 240 aaKnown RBP eCLIP22.86■■□□□ 1.25
ERBB2-205ENST00000578199 MS4A1P11836 297 aa22.85■■□□□ 1.25
ERBB2-205ENST00000578199 NGEFQ8N5V2 710 aa22.85■■□□□ 1.25
ERBB2-205ENST00000578199 CENPQQ7L2Z9 268 aaPredicted RBP22.82■■□□□ 1.24
ERBB2-205ENST00000578199 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
ERBB2-205ENST00000578199 WAPLQ7Z5K2 1190 aa22.82■■□□□ 1.24
ERBB2-205ENST00000578199 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
ERBB2-205ENST00000578199 FYB1O15117 783 aa22.81■■□□□ 1.24
ERBB2-205ENST00000578199 FRAT1Q92837 279 aaPredicted RBP22.81■■□□□ 1.24
ERBB2-205ENST00000578199 ABCC11Q96J66 1382 aa22.81■■□□□ 1.24
ERBB2-205ENST00000578199 IQSEC2Q5JU85 1478 aa22.81■■□□□ 1.24
ERBB2-205ENST00000578199 PANK1Q8TE04 598 aa22.81■■□□□ 1.24
ERBB2-205ENST00000578199 CLTCQ00610 1675 aaKnown RBP22.8■■□□□ 1.24
ERBB2-205ENST00000578199 CABP1Q9NZU7 370 aa22.8■■□□□ 1.24
ERBB2-205ENST00000578199 ZBTB47Q9UFB7 747 aaPredicted RBP22.8■■□□□ 1.24
ERBB2-205ENST00000578199 NSD2O96028 1365 aa22.8■■□□□ 1.24
ERBB2-205ENST00000578199 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
ERBB2-205ENST00000578199 CANXP27824 592 aaKnown RBP22.79■■□□□ 1.24
ERBB2-205ENST00000578199 PHF23Q9BUL5 403 aaPredicted RBP22.79■■□□□ 1.24
ERBB2-205ENST00000578199 BCL2L13Q9BXK5 485 aa22.79■■□□□ 1.24
ERBB2-205ENST00000578199 TERF2IPQ9NYB0 399 aa22.78■■□□□ 1.24
ERBB2-205ENST00000578199 COG6Q9Y2V7 657 aa22.78■■□□□ 1.24
ERBB2-205ENST00000578199 CD163L1Q9NR16 1453 aa22.78■■□□□ 1.24
ERBB2-205ENST00000578199 NBR1Q14596 966 aa22.77■■□□□ 1.24
ERBB2-205ENST00000578199 ATAD2Q6PL18 1390 aa22.77■■□□□ 1.23
ERBB2-205ENST00000578199 FBLN1P23142 703 aa22.76■■□□□ 1.23
ERBB2-205ENST00000578199 TNNQ9UQP3 1299 aa22.76■■□□□ 1.23
ERBB2-205ENST00000578199 RGS3P49796 1198 aa22.76■■□□□ 1.23
ERBB2-205ENST00000578199 IGHDP01880 384 aa22.75■■□□□ 1.23
ERBB2-205ENST00000578199 RARSP54136 660 aaKnown RBP22.75■■□□□ 1.23
ERBB2-205ENST00000578199 WDR63Q8IWG1 891 aa22.75■■□□□ 1.23
ERBB2-205ENST00000578199 NINLQ9Y2I6 1382 aa22.74■■□□□ 1.23
ERBB2-205ENST00000578199 A2ML1A8K2U0 1454 aa22.74■■□□□ 1.23
ERBB2-205ENST00000578199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.74■■□□□ 1.23
ERBB2-205ENST00000578199 PDE3AQ14432 1141 aa22.72■■□□□ 1.23
ERBB2-205ENST00000578199 HDGFL2Q7Z4V5 671 aaPredicted RBP22.72■■□□□ 1.23
ERBB2-205ENST00000578199 CCDC27Q2M243 656 aa22.72■■□□□ 1.23
ERBB2-205ENST00000578199 RIMS2Q9UQ26 1411 aa22.72■■□□□ 1.23
ERBB2-205ENST00000578199 ARHGEF40Q8TER5 1519 aa22.71■■□□□ 1.23
ERBB2-205ENST00000578199 TSR2Q969E8 191 aaKnown RBP22.71■■□□□ 1.23
ERBB2-205ENST00000578199 PLEKHF1Q96S99 279 aa22.71■■□□□ 1.23
ERBB2-205ENST00000578199 AGLP35573 1532 aa22.7■■□□□ 1.22
ERBB2-205ENST00000578199 RLBP1P12271 317 aa22.7■■□□□ 1.22
ERBB2-205ENST00000578199 PPP6R1Q9UPN7 881 aa22.7■■□□□ 1.22
ERBB2-205ENST00000578199 NLRP1Q9C000 1473 aa22.7■■□□□ 1.22
ERBB2-205ENST00000578199 PPM1GO15355 546 aaPredicted RBP22.69■■□□□ 1.22
ERBB2-205ENST00000578199 CLUAP1Q96AJ1 413 aa22.69■■□□□ 1.22
ERBB2-205ENST00000578199 TMPOP42166 694 aaKnown RBP22.67■■□□□ 1.22
ERBB2-205ENST00000578199 REREQ9P2R6 1566 aa22.67■■□□□ 1.22
ERBB2-205ENST00000578199 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
ERBB2-205ENST00000578199 SPATA31D1Q6ZQQ2 1576 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms