RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 PDE4AP27815 886 aa9.2□□□□□ -0.94
KRT39-203ENST00000578078 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
KRT39-203ENST00000578078 INO80Q9ULG1 1556 aaPredicted RBP9.19□□□□□ -0.94
KRT39-203ENST00000578078 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
KRT39-203ENST00000578078 HSPA5P11021 654 aaKnown RBP9.18□□□□□ -0.94
KRT39-203ENST00000578078 AMHR2Q16671 573 aa9.18□□□□□ -0.94
KRT39-203ENST00000578078 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
KRT39-203ENST00000578078 FNBP4Q8N3X1 1017 aaPredicted RBP9.18□□□□□ -0.94
KRT39-203ENST00000578078 SPAG9O60271 1321 aaKnown RBP9.18□□□□□ -0.94
KRT39-203ENST00000578078 ATP7AQ04656 1500 aa9.18□□□□□ -0.94
KRT39-203ENST00000578078 GPR37O15354 613 aa9.17□□□□□ -0.94
KRT39-203ENST00000578078 ADGRL1O94910 1474 aa9.17□□□□□ -0.94
KRT39-203ENST00000578078 MINK1Q8N4C8 1332 aaPredicted RBP9.17□□□□□ -0.94
KRT39-203ENST00000578078 DEPDC5O75140 1603 aa9.17□□□□□ -0.94
KRT39-203ENST00000578078 EIF2AK4Q9P2K8 1649 aaKnown RBP9.17□□□□□ -0.94
KRT39-203ENST00000578078 HSP90B1P14625 803 aaKnown RBP9.16□□□□□ -0.94
KRT39-203ENST00000578078 IRF5Q13568 498 aa9.16□□□□□ -0.94
KRT39-203ENST00000578078 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
KRT39-203ENST00000578078 CCDC144AA2RUR9 1427 aa9.16□□□□□ -0.94
KRT39-203ENST00000578078 E9PSI1 815 aa9.16□□□□□ -0.94
KRT39-203ENST00000578078 RRP9O43818 475 aaKnown RBP9.16□□□□□ -0.94
KRT39-203ENST00000578078 PAK3O75914 559 aaPredicted RBP9.16□□□□□ -0.94
KRT39-203ENST00000578078 NLRP6P59044 892 aa9.16□□□□□ -0.94
KRT39-203ENST00000578078 NBPF8Q3BBV2 869 aa9.16□□□□□ -0.94
KRT39-203ENST00000578078 CRISPLD2Q9H0B8 497 aa9.16□□□□□ -0.94
KRT39-203ENST00000578078 UHRF1BP1Q6BDS2 1440 aa9.15□□□□□ -0.94
KRT39-203ENST00000578078 DSG3P32926 999 aa9.15□□□□□ -0.94
KRT39-203ENST00000578078 C1QBPQ07021 282 aaKnown RBP9.15□□□□□ -0.94
KRT39-203ENST00000578078 RALGAPBQ86X10 1494 aa9.15□□□□□ -0.95
KRT39-203ENST00000578078 PCMTD1Q96MG8 357 aaPredicted RBP9.14□□□□□ -0.95
KRT39-203ENST00000578078 KDM5CP41229 1560 aa9.14□□□□□ -0.95
KRT39-203ENST00000578078 TET3O43151 1660 aa9.14□□□□□ -0.95
KRT39-203ENST00000578078 CDK11BP21127 795 aaKnown RBP9.13□□□□□ -0.95
KRT39-203ENST00000578078 CCDC102AQ96A19 550 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 SCAPERQ9BY12 1400 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 E9PCH4 1651 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 SPHKAPQ2M3C7 1700 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 SPATA31E1Q6ZUB1 1445 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 ATP10AO60312 1499 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 KIDINS220Q9ULH0 1771 aa9.13□□□□□ -0.95
KRT39-203ENST00000578078 CEP152O94986 1710 aa9.12□□□□□ -0.95
KRT39-203ENST00000578078 CNTLNQ9NXG0 1405 aa9.12□□□□□ -0.95
KRT39-203ENST00000578078 NEFMP07197 916 aa9.12□□□□□ -0.95
KRT39-203ENST00000578078 MAP2K5Q13163 448 aa9.12□□□□□ -0.95
KRT39-203ENST00000578078 ZNF326Q5BKZ1 582 aaKnown RBP9.12□□□□□ -0.95
KRT39-203ENST00000578078 AFAP1Q8N556 730 aa9.12□□□□□ -0.95
KRT39-203ENST00000578078 TRPM1Q7Z4N2 1603 aa9.11□□□□□ -0.95
KRT39-203ENST00000578078 CD109Q6YHK3 1445 aa9.11□□□□□ -0.95
KRT39-203ENST00000578078 KANK1Q14678 1352 aa9.11□□□□□ -0.95
KRT39-203ENST00000578078 CCDC7Q96M83 1385 aa9.11□□□□□ -0.95
KRT39-203ENST00000578078 PUS7Q96PZ0 661 aaKnown RBP9.11□□□□□ -0.95
KRT39-203ENST00000578078 PRDM15P57071 1507 aaPredicted RBP9.11□□□□□ -0.95
KRT39-203ENST00000578078 USP47Q96K76 1375 aa9.11□□□□□ -0.95
KRT39-203ENST00000578078 PSEN1P49768 467 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 PLSCR2Q9NRY7 297 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 HECW2Q9P2P5 1572 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 TRPM2O94759 1503 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 PLA2R1Q13018 1463 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 IRF6O14896 467 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 LAMC1P11047 1609 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 VWDEQ8N2E2 1590 aa9.1□□□□□ -0.95
KRT39-203ENST00000578078 CENPJQ9HC77 1338 aaPredicted RBP9.09□□□□□ -0.95
KRT39-203ENST00000578078 SOX12O15370 315 aa9.09□□□□□ -0.95
KRT39-203ENST00000578078 DCAF11Q8TEB1 546 aa9.09□□□□□ -0.95
KRT39-203ENST00000578078 PCDHB8Q9UN66 801 aa9.09□□□□□ -0.95
KRT39-203ENST00000578078 PHF8Q9UPP1 1060 aa9.09□□□□□ -0.95
KRT39-203ENST00000578078 PCDHB13Q9Y5F0 798 aa9.09□□□□□ -0.95
KRT39-203ENST00000578078 BCORL1Q5H9F3 1711 aa9.09□□□□□ -0.95
KRT39-203ENST00000578078 POGZQ7Z3K3 1410 aa9.09□□□□□ -0.96
KRT39-203ENST00000578078 RNF17Q9BXT8 1623 aaKnown RBP9.08□□□□□ -0.96
KRT39-203ENST00000578078 NEO1Q92859 1461 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 PRAG1Q86YV5 1406 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 RIMBP3CA6NJZ7 1639 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 RIMBP3BA6NNM3 1639 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 MROH1Q8NDA8 1641 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 RIMBP3Q9UFD9 1639 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 MAP3K4Q9Y6R4 1608 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 DHX29Q7Z478 1369 aaKnown RBP9.08□□□□□ -0.96
KRT39-203ENST00000578078 ARID4BQ4LE39 1312 aaPredicted RBP9.08□□□□□ -0.96
KRT39-203ENST00000578078 RNF123Q5XPI4 1314 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 ZBED9Q6R2W3 1325 aa9.08□□□□□ -0.96
KRT39-203ENST00000578078 A2MP01023 1474 aa9.07□□□□□ -0.96
KRT39-203ENST00000578078 PATL2C9JE40 543 aaKnown RBP9.07□□□□□ -0.96
KRT39-203ENST00000578078 KIF7Q2M1P5 1343 aa9.07□□□□□ -0.96
KRT39-203ENST00000578078 MS4A1P11836 297 aa9.07□□□□□ -0.96
KRT39-203ENST00000578078 EFCAB3Q8N7B9 438 aa9.07□□□□□ -0.96
KRT39-203ENST00000578078 SPDYE1Q8NFV5 336 aaPredicted RBP9.07□□□□□ -0.96
KRT39-203ENST00000578078 CARD11Q9BXL7 1154 aa9.07□□□□□ -0.96
KRT39-203ENST00000578078 ROCK2O75116 1388 aaKnown RBP9.06□□□□□ -0.96
KRT39-203ENST00000578078 KIF1BO60333 1816 aa9.06□□□□□ -0.96
KRT39-203ENST00000578078 MLH3Q9UHC1 1453 aa9.06□□□□□ -0.96
KRT39-203ENST00000578078 CLTCL1P53675 1640 aa9.06□□□□□ -0.96
KRT39-203ENST00000578078 GLI2P10070 1586 aa9.06□□□□□ -0.96
KRT39-203ENST00000578078 EFCAB6Q5THR3 1501 aa9.06□□□□□ -0.96
KRT39-203ENST00000578078 KIF3BO15066 747 aa9.05□□□□□ -0.96
KRT39-203ENST00000578078 PDE4CQ08493 712 aa9.05□□□□□ -0.96
KRT39-203ENST00000578078 ABCA6Q8N139 1617 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms