RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 PRKD2Q9BZL6 878 aa13.84□□□□□ -0.19
SNRPD1-202ENST00000577906 RSPH6AQ9H0K4 717 aa13.84□□□□□ -0.19
SNRPD1-202ENST00000577906 PCDHGC3Q9UN70 934 aa13.84□□□□□ -0.19
SNRPD1-202ENST00000577906 RSBN1LQ6PCB5 846 aaPredicted RBP13.83□□□□□ -0.2
SNRPD1-202ENST00000577906 V9GY48 417 aaPredicted RBP13.83□□□□□ -0.2
SNRPD1-202ENST00000577906 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
SNRPD1-202ENST00000577906 SPTLC1O15269 473 aa13.82□□□□□ -0.2
SNRPD1-202ENST00000577906 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
SNRPD1-202ENST00000577906 RIC3Q7Z5B4 369 aa13.81□□□□□ -0.2
SNRPD1-202ENST00000577906 RETREG3Q86VR2 466 aa13.81□□□□□ -0.2
SNRPD1-202ENST00000577906 SYMPKQ92797 1274 aaKnown RBP13.81□□□□□ -0.2
SNRPD1-202ENST00000577906 NEUROD2Q15784 382 aa13.8□□□□□ -0.2
SNRPD1-202ENST00000577906 PRDM9Q9NQV7 894 aa13.8□□□□□ -0.2
SNRPD1-202ENST00000577906 SPDYE5A6NIY4 337 aa13.79□□□□□ -0.2
SNRPD1-202ENST00000577906 MMP16P51512 607 aa13.79□□□□□ -0.2
SNRPD1-202ENST00000577906 MYSM1Q5VVJ2 828 aa13.79□□□□□ -0.2
SNRPD1-202ENST00000577906 FAM117AQ9C073 453 aa13.78□□□□□ -0.2
SNRPD1-202ENST00000577906 SLC19A1P41440 591 aa13.77□□□□□ -0.21
SNRPD1-202ENST00000577906 MTMR2Q13614 643 aa13.77□□□□□ -0.21
SNRPD1-202ENST00000577906 FCF1Q9Y324 198 aaKnown RBP13.77□□□□□ -0.21
SNRPD1-202ENST00000577906 DXOO77932 396 aaKnown RBP13.76□□□□□ -0.21
SNRPD1-202ENST00000577906 TUSC1Q2TAM9 212 aa13.75□□□□□ -0.21
SNRPD1-202ENST00000577906 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
SNRPD1-202ENST00000577906 JUNDP17535 347 aa13.74□□□□□ -0.21
SNRPD1-202ENST00000577906 PRPF38BQ5VTL8 546 aaKnown RBP13.74□□□□□ -0.21
SNRPD1-202ENST00000577906 ZBTB3Q9H5J0 574 aa13.74□□□□□ -0.21
SNRPD1-202ENST00000577906 LIMD1Q9UGP4 676 aa13.73□□□□□ -0.21
SNRPD1-202ENST00000577906 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
SNRPD1-202ENST00000577906 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
SNRPD1-202ENST00000577906 PLA2G2CQ5R387 149 aa13.71□□□□□ -0.21
SNRPD1-202ENST00000577906 LIAT1Q6ZQX7 453 aa13.71□□□□□ -0.21
SNRPD1-202ENST00000577906 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
SNRPD1-202ENST00000577906 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
SNRPD1-202ENST00000577906 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
SNRPD1-202ENST00000577906 HRCP23327 699 aa13.7□□□□□ -0.22
SNRPD1-202ENST00000577906 RPIAP49247 311 aa13.7□□□□□ -0.22
SNRPD1-202ENST00000577906 CSPP1Q1MSJ5 1256 aa13.7□□□□□ -0.22
SNRPD1-202ENST00000577906 EMID1Q96A84 441 aaPredicted RBP13.7□□□□□ -0.22
SNRPD1-202ENST00000577906 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
SNRPD1-202ENST00000577906 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
SNRPD1-202ENST00000577906 SKIV2LQ15477 1246 aaKnown RBP13.69□□□□□ -0.22
SNRPD1-202ENST00000577906 SH3D19Q5HYK7 790 aa13.69□□□□□ -0.22
SNRPD1-202ENST00000577906 SPRYD7Q5W111 196 aa13.69□□□□□ -0.22
SNRPD1-202ENST00000577906 IRX2Q9BZI1 471 aaPredicted RBP13.69□□□□□ -0.22
SNRPD1-202ENST00000577906 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
SNRPD1-202ENST00000577906 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
SNRPD1-202ENST00000577906 NUTM2DQ5VT03 806 aaPredicted RBP13.68□□□□□ -0.22
SNRPD1-202ENST00000577906 DESI1Q6ICB0 168 aa13.68□□□□□ -0.22
SNRPD1-202ENST00000577906 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
SNRPD1-202ENST00000577906 CCDC24Q8N4L8 307 aa13.67□□□□□ -0.22
SNRPD1-202ENST00000577906 LILRB3O75022 631 aa13.66□□□□□ -0.22
SNRPD1-202ENST00000577906 CD2BP2O95400 341 aaKnown RBP13.66□□□□□ -0.22
SNRPD1-202ENST00000577906 ZNF598Q86UK7 904 aaKnown RBP13.66□□□□□ -0.22
SNRPD1-202ENST00000577906 CABLES1Q8TDN4 633 aa13.66□□□□□ -0.22
SNRPD1-202ENST00000577906 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
SNRPD1-202ENST00000577906 NUDT12Q9BQG2 462 aa13.64□□□□□ -0.23
SNRPD1-202ENST00000577906 QPCTQ16769 361 aa13.63□□□□□ -0.23
SNRPD1-202ENST00000577906 PTPRNQ16849 979 aa13.63□□□□□ -0.23
SNRPD1-202ENST00000577906 CFAP99D6REC4 459 aa13.62□□□□□ -0.23
SNRPD1-202ENST00000577906 ZNF697Q5TEC3 545 aa13.62□□□□□ -0.23
SNRPD1-202ENST00000577906 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
SNRPD1-202ENST00000577906 CCNYL3P0C7X3 344 aa13.61□□□□□ -0.23
SNRPD1-202ENST00000577906 LAPTM4AQ15012 233 aa13.6□□□□□ -0.23
SNRPD1-202ENST00000577906 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
SNRPD1-202ENST00000577906 GFRA3O60609 400 aa13.58□□□□□ -0.24
SNRPD1-202ENST00000577906 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
SNRPD1-202ENST00000577906 LYPD8Q6UX82 237 aa13.58□□□□□ -0.24
SNRPD1-202ENST00000577906 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.24
SNRPD1-202ENST00000577906 TRIM32Q13049 653 aa13.57□□□□□ -0.24
SNRPD1-202ENST00000577906 HELBQ8NG08 1087 aaPredicted RBP13.57□□□□□ -0.24
SNRPD1-202ENST00000577906 TSC1Q92574 1164 aa13.57□□□□□ -0.24
SNRPD1-202ENST00000577906 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.57□□□□□ -0.24
SNRPD1-202ENST00000577906 EVA1BQ9NVM1 165 aa13.57□□□□□ -0.24
SNRPD1-202ENST00000577906 PDZRN3Q9UPQ7 1066 aa13.57□□□□□ -0.24
SNRPD1-202ENST00000577906 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
SNRPD1-202ENST00000577906 KCNH2Q12809 1159 aa13.54□□□□□ -0.24
SNRPD1-202ENST00000577906 NRG2O14511 850 aaPredicted RBP13.53□□□□□ -0.24
SNRPD1-202ENST00000577906 PRR20EP86478 221 aa13.53□□□□□ -0.24
SNRPD1-202ENST00000577906 PRR20CP86479 221 aa13.53□□□□□ -0.24
SNRPD1-202ENST00000577906 PRR20DP86480 221 aa13.53□□□□□ -0.24
SNRPD1-202ENST00000577906 PRR20BP86481 221 aa13.53□□□□□ -0.24
SNRPD1-202ENST00000577906 PRR20AP86496 221 aa13.53□□□□□ -0.24
SNRPD1-202ENST00000577906 PPP2R2DQ66LE6 453 aa13.53□□□□□ -0.24
SNRPD1-202ENST00000577906 PTCRAQ6ISU1 281 aaPredicted RBP13.52□□□□□ -0.25
SNRPD1-202ENST00000577906 TRIM67Q6ZTA4 783 aa13.52□□□□□ -0.25
SNRPD1-202ENST00000577906 GDF9O60383 454 aa13.51□□□□□ -0.25
SNRPD1-202ENST00000577906 CTHP32929 405 aa13.51□□□□□ -0.25
SNRPD1-202ENST00000577906 FOXC1Q12948 553 aa13.5□□□□□ -0.25
SNRPD1-202ENST00000577906 WNT7BP56706 349 aa13.49□□□□□ -0.25
SNRPD1-202ENST00000577906 UNC93B1Q9H1C4 597 aa13.49□□□□□ -0.25
SNRPD1-202ENST00000577906 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
SNRPD1-202ENST00000577906 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
SNRPD1-202ENST00000577906 TNFRSF10AO00220 468 aa13.47□□□□□ -0.25
SNRPD1-202ENST00000577906 WNT7AO00755 349 aa13.47□□□□□ -0.25
SNRPD1-202ENST00000577906 F12P00748 615 aaPredicted RBP13.46□□□□□ -0.25
SNRPD1-202ENST00000577906 CTDSPL2Q05D32 466 aa13.44□□□□□ -0.26
SNRPD1-202ENST00000577906 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
SNRPD1-202ENST00000577906 Q6ZNB5 142 aa13.44□□□□□ -0.26
SNRPD1-202ENST00000577906 MAP10Q9P2G4 905 aa13.44□□□□□ -0.26
SNRPD1-202ENST00000577906 AP1G2O75843 785 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms