RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-205ENST00000577667 SLC24A1O60721 1099 aa8.63□□□□□ -1.03
PPP4R1-205ENST00000577667 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
PPP4R1-205ENST00000577667 TTLL12Q14166 644 aaPredicted RBP8.63□□□□□ -1.03
PPP4R1-205ENST00000577667 REPIN1Q9BWE0 567 aaKnown RBP8.63□□□□□ -1.03
PPP4R1-205ENST00000577667 PKD2L1Q9P0L9 805 aa8.63□□□□□ -1.03
PPP4R1-205ENST00000577667 WFS1O76024 890 aa8.61□□□□□ -1.03
PPP4R1-205ENST00000577667 USP46P62068 366 aa8.61□□□□□ -1.03
PPP4R1-205ENST00000577667 AMHR2Q16671 573 aa8.61□□□□□ -1.03
PPP4R1-205ENST00000577667 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
PPP4R1-205ENST00000577667 CRIPAKQ8N1N5 446 aa8.61□□□□□ -1.03
PPP4R1-205ENST00000577667 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
PPP4R1-205ENST00000577667 BRICD5Q6PL45 260 aa8.6□□□□□ -1.03
PPP4R1-205ENST00000577667 HOXA2O43364 376 aa8.59□□□□□ -1.03
PPP4R1-205ENST00000577667 Q3C1V9 767 aa8.59□□□□□ -1.03
PPP4R1-205ENST00000577667 FAM160A2Q8N612 972 aaPredicted RBP8.59□□□□□ -1.03
PPP4R1-205ENST00000577667 HLA-CQ95604 372 aa8.59□□□□□ -1.03
PPP4R1-205ENST00000577667 FOXC1Q12948 553 aa8.58□□□□□ -1.04
PPP4R1-205ENST00000577667 PRDM9Q9NQV7 894 aa8.58□□□□□ -1.04
PPP4R1-205ENST00000577667 AVPP01185 164 aa8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 SSTR3P32745 418 aaPredicted RBP8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 NFX1Q12986 1120 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 GIGYF2Q6Y7W6 1299 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 NUTM1Q86Y26 1132 aa8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 AK7Q96M32 723 aa8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 GMPR2Q9P2T1 348 aaKnown RBP8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
PPP4R1-205ENST00000577667 TRIM66O15016 1216 aa8.56□□□□□ -1.04
PPP4R1-205ENST00000577667 WIPF1O43516 503 aa8.56□□□□□ -1.04
PPP4R1-205ENST00000577667 TOR4AQ9NXH8 423 aa8.56□□□□□ -1.04
PPP4R1-205ENST00000577667 FCF1Q9Y324 198 aaKnown RBP8.56□□□□□ -1.04
PPP4R1-205ENST00000577667 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
PPP4R1-205ENST00000577667 GUCA2AQ02747 115 aa8.55□□□□□ -1.04
PPP4R1-205ENST00000577667 PARP9Q8IXQ6 854 aa8.55□□□□□ -1.04
PPP4R1-205ENST00000577667 BCANQ96GW7 911 aa8.54□□□□□ -1.04
PPP4R1-205ENST00000577667 AXIN1O15169 862 aa8.53□□□□□ -1.04
PPP4R1-205ENST00000577667 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
PPP4R1-205ENST00000577667 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
PPP4R1-205ENST00000577667 SLC24A3Q9HC58 644 aa8.52□□□□□ -1.05
PPP4R1-205ENST00000577667 RPIAP49247 311 aa8.51□□□□□ -1.05
PPP4R1-205ENST00000577667 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
PPP4R1-205ENST00000577667 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
PPP4R1-205ENST00000577667 BEGAINQ9BUH8 593 aa8.51□□□□□ -1.05
PPP4R1-205ENST00000577667 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
PPP4R1-205ENST00000577667 FDX1P10109 184 aa8.5□□□□□ -1.05
PPP4R1-205ENST00000577667 MMP16P51512 607 aa8.5□□□□□ -1.05
PPP4R1-205ENST00000577667 INSM1Q01101 510 aaPredicted RBP8.5□□□□□ -1.05
PPP4R1-205ENST00000577667 CTC1Q2NKJ3 1217 aa8.5□□□□□ -1.05
PPP4R1-205ENST00000577667 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
PPP4R1-205ENST00000577667 MS4A1P11836 297 aa8.49□□□□□ -1.05
PPP4R1-205ENST00000577667 PDE4DQ08499 809 aa8.49□□□□□ -1.05
PPP4R1-205ENST00000577667 PCDHGC3Q9UN70 934 aa8.49□□□□□ -1.05
PPP4R1-205ENST00000577667 MOXD2PA6NHM9 499 aa8.48□□□□□ -1.05
PPP4R1-205ENST00000577667 CD2BP2O95400 341 aaKnown RBP8.48□□□□□ -1.05
PPP4R1-205ENST00000577667 NDUFV2P19404 249 aa8.48□□□□□ -1.05
PPP4R1-205ENST00000577667 CYP4X1Q8N118 509 aa8.48□□□□□ -1.05
PPP4R1-205ENST00000577667 C6orf229H3BNL8 230 aa8.47□□□□□ -1.05
PPP4R1-205ENST00000577667 RETREG3Q86VR2 466 aa8.47□□□□□ -1.05
PPP4R1-205ENST00000577667 ZBTB24O43167 697 aaPredicted RBP8.46□□□□□ -1.06
PPP4R1-205ENST00000577667 TBC1D2Q9BYX2 928 aa8.46□□□□□ -1.06
PPP4R1-205ENST00000577667 JUNDP17535 347 aa8.45□□□□□ -1.06
PPP4R1-205ENST00000577667 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
PPP4R1-205ENST00000577667 CCDC24Q8N4L8 307 aa8.44□□□□□ -1.06
PPP4R1-205ENST00000577667 TERTO14746 1132 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-205ENST00000577667 SNRPBP14678 240 aaKnown RBP8.43□□□□□ -1.06
PPP4R1-205ENST00000577667 TRIM32Q13049 653 aa8.42□□□□□ -1.06
PPP4R1-205ENST00000577667 RSBN1LQ6PCB5 846 aaPredicted RBP8.42□□□□□ -1.06
PPP4R1-205ENST00000577667 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
PPP4R1-205ENST00000577667 GJA5P36382 358 aa8.41□□□□□ -1.06
PPP4R1-205ENST00000577667 MTMR2Q13614 643 aa8.41□□□□□ -1.06
PPP4R1-205ENST00000577667 KRTAP4-6Q9BYQ5 205 aa8.41□□□□□ -1.06
PPP4R1-205ENST00000577667 ATP13A2Q9NQ11 1180 aa8.41□□□□□ -1.06
PPP4R1-205ENST00000577667 TTC24A2A3L6 582 aaPredicted RBP8.4□□□□□ -1.06
PPP4R1-205ENST00000577667 SPTLC1O15269 473 aa8.4□□□□□ -1.06
PPP4R1-205ENST00000577667 SMPD1P17405 629 aa8.4□□□□□ -1.06
PPP4R1-205ENST00000577667 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
PPP4R1-205ENST00000577667 NUDT12Q9BQG2 462 aa8.4□□□□□ -1.06
PPP4R1-205ENST00000577667 SPDYE5A6NIY4 337 aa8.39□□□□□ -1.07
PPP4R1-205ENST00000577667 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
PPP4R1-205ENST00000577667 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
PPP4R1-205ENST00000577667 PCDHB15Q9Y5E8 787 aa8.38□□□□□ -1.07
PPP4R1-205ENST00000577667 CCNYL3P0C7X3 344 aa8.37□□□□□ -1.07
PPP4R1-205ENST00000577667 PTPRNQ16849 979 aa8.37□□□□□ -1.07
PPP4R1-205ENST00000577667 MYSM1Q5VVJ2 828 aa8.37□□□□□ -1.07
PPP4R1-205ENST00000577667 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
PPP4R1-205ENST00000577667 WNT7AO00755 349 aa8.36□□□□□ -1.07
PPP4R1-205ENST00000577667 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
PPP4R1-205ENST00000577667 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-205ENST00000577667 J3QL48 77 aa8.35□□□□□ -1.07
PPP4R1-205ENST00000577667 HRCP23327 699 aa8.35□□□□□ -1.07
PPP4R1-205ENST00000577667 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
PPP4R1-205ENST00000577667 PTCRAQ6ISU1 281 aaPredicted RBP8.35□□□□□ -1.07
PPP4R1-205ENST00000577667 SENP2Q9HC62 589 aa8.35□□□□□ -1.07
PPP4R1-205ENST00000577667 LIMD1Q9UGP4 676 aa8.35□□□□□ -1.07
PPP4R1-205ENST00000577667 CFAP99D6REC4 459 aa8.34□□□□□ -1.07
PPP4R1-205ENST00000577667 LORP23490 312 aaPredicted RBP8.34□□□□□ -1.07
PPP4R1-205ENST00000577667 WNT7BP56706 349 aa8.34□□□□□ -1.07
PPP4R1-205ENST00000577667 SKOR1P84550 965 aa8.34□□□□□ -1.07
PPP4R1-205ENST00000577667 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
PPP4R1-205ENST00000577667 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms