RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
RNF43-202ENST00000577625 NLRP13Q86W25 1043 aa18.54■□□□□ 0.56
RNF43-202ENST00000577625 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
RNF43-202ENST00000577625 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
RNF43-202ENST00000577625 LRPPRCP42704 1394 aaKnown RBP18.54■□□□□ 0.56
RNF43-202ENST00000577625 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
RNF43-202ENST00000577625 ADAMTSL3P82987 1691 aa18.53■□□□□ 0.56
RNF43-202ENST00000577625 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
RNF43-202ENST00000577625 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
RNF43-202ENST00000577625 PRAM1Q96QH2 718 aa18.52■□□□□ 0.56
RNF43-202ENST00000577625 HDGFP51858 240 aaKnown RBP18.52■□□□□ 0.56
RNF43-202ENST00000577625 SLIT1O75093 1534 aa18.52■□□□□ 0.55
RNF43-202ENST00000577625 CARD14Q9BXL6 1004 aa18.51■□□□□ 0.55
RNF43-202ENST00000577625 ARHGAP23Q9P227 1491 aa18.51■□□□□ 0.55
RNF43-202ENST00000577625 METP08581 1390 aa18.5■□□□□ 0.55
RNF43-202ENST00000577625 ZBED9Q6R2W3 1325 aa18.5■□□□□ 0.55
RNF43-202ENST00000577625 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
RNF43-202ENST00000577625 ABCC11Q96J66 1382 aa18.5■□□□□ 0.55
RNF43-202ENST00000577625 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
RNF43-202ENST00000577625 POGKQ9P215 609 aa18.49■□□□□ 0.55
RNF43-202ENST00000577625 ADAMTS13Q76LX8 1427 aa18.48■□□□□ 0.55
RNF43-202ENST00000577625 PLEKHG1Q9ULL1 1385 aa18.48■□□□□ 0.55
RNF43-202ENST00000577625 SLC12A5Q9H2X9 1139 aa18.48■□□□□ 0.55
RNF43-202ENST00000577625 CPS1P31327 1500 aa18.48■□□□□ 0.55
RNF43-202ENST00000577625 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
RNF43-202ENST00000577625 LTKP29376 864 aa18.47■□□□□ 0.55
RNF43-202ENST00000577625 TECPR2O15040 1411 aa18.47■□□□□ 0.55
RNF43-202ENST00000577625 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
RNF43-202ENST00000577625 CEP170BQ9Y4F5 1589 aaPredicted RBP18.46■□□□□ 0.55
RNF43-202ENST00000577625 NSD3Q9BZ95 1437 aa18.46■□□□□ 0.55
RNF43-202ENST00000577625 PLEKHH1Q9ULM0 1364 aa18.45■□□□□ 0.54
RNF43-202ENST00000577625 MED14O60244 1454 aa18.45■□□□□ 0.54
RNF43-202ENST00000577625 ZNF142P52746 1687 aaPredicted RBP18.44■□□□□ 0.54
RNF43-202ENST00000577625 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
RNF43-202ENST00000577625 NINLQ9Y2I6 1382 aa18.44■□□□□ 0.54
RNF43-202ENST00000577625 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
RNF43-202ENST00000577625 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
RNF43-202ENST00000577625 WAPLQ7Z5K2 1190 aa18.43■□□□□ 0.54
RNF43-202ENST00000577625 ATAD2Q6PL18 1390 aa18.43■□□□□ 0.54
RNF43-202ENST00000577625 FAM135BQ49AJ0 1406 aa18.43■□□□□ 0.54
RNF43-202ENST00000577625 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
RNF43-202ENST00000577625 TXNDC2Q86VQ3 553 aa18.42■□□□□ 0.54
RNF43-202ENST00000577625 UBE2Q2Q8WVN8 375 aa18.42■□□□□ 0.54
RNF43-202ENST00000577625 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
RNF43-202ENST00000577625 EID1Q9Y6B2 187 aa18.41■□□□□ 0.54
RNF43-202ENST00000577625 THEMISQ8N1K5 641 aaPredicted RBP18.4■□□□□ 0.54
RNF43-202ENST00000577625 INSRP06213 1382 aa18.39■□□□□ 0.54
RNF43-202ENST00000577625 DIP2AQ14689 1571 aa18.39■□□□□ 0.54
RNF43-202ENST00000577625 SIRT1Q96EB6 747 aa18.39■□□□□ 0.53
RNF43-202ENST00000577625 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
RNF43-202ENST00000577625 CD163L1Q9NR16 1453 aa18.39■□□□□ 0.53
RNF43-202ENST00000577625 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
RNF43-202ENST00000577625 ANKRD26Q9UPS8 1709 aa18.36■□□□□ 0.53
RNF43-202ENST00000577625 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
RNF43-202ENST00000577625 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
RNF43-202ENST00000577625 PTPRUQ92729 1446 aa18.36■□□□□ 0.53
RNF43-202ENST00000577625 ADGRB2O60241 1585 aa18.36■□□□□ 0.53
RNF43-202ENST00000577625 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
RNF43-202ENST00000577625 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
RNF43-202ENST00000577625 SLC26A8Q96RN1 970 aa18.34■□□□□ 0.53
RNF43-202ENST00000577625 NSD2O96028 1365 aa18.33■□□□□ 0.53
RNF43-202ENST00000577625 KIF20BQ96Q89 1820 aa18.33■□□□□ 0.53
RNF43-202ENST00000577625 XRN1Q8IZH2 1706 aaKnown RBP18.33■□□□□ 0.52
RNF43-202ENST00000577625 ATP7BP35670 1465 aa18.32■□□□□ 0.52
RNF43-202ENST00000577625 WASLO00401 505 aaPredicted RBP18.32■□□□□ 0.52
RNF43-202ENST00000577625 TBX22Q9Y458 520 aa18.32■□□□□ 0.52
RNF43-202ENST00000577625 TERF2IPQ9NYB0 399 aa18.31■□□□□ 0.52
RNF43-202ENST00000577625 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
RNF43-202ENST00000577625 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
RNF43-202ENST00000577625 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
RNF43-202ENST00000577625 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
RNF43-202ENST00000577625 CABP1Q9NZU7 370 aa18.3■□□□□ 0.52
RNF43-202ENST00000577625 PTCH1Q13635 1447 aa18.29■□□□□ 0.52
RNF43-202ENST00000577625 SHPRHQ149N8 1683 aa18.29■□□□□ 0.52
RNF43-202ENST00000577625 AKAP12Q02952 1782 aa18.28■□□□□ 0.52
RNF43-202ENST00000577625 TOPAZ1Q8N9V7 1692 aa18.28■□□□□ 0.52
RNF43-202ENST00000577625 ITSN1Q15811 1721 aa18.28■□□□□ 0.52
RNF43-202ENST00000577625 MON2Q7Z3U7 1717 aa18.28■□□□□ 0.52
RNF43-202ENST00000577625 CDC42BPGQ6DT37 1551 aa18.27■□□□□ 0.52
RNF43-202ENST00000577625 ADAMTS8Q9UP79 889 aa18.27■□□□□ 0.52
RNF43-202ENST00000577625 POLR3AO14802 1390 aaPredicted RBP18.27■□□□□ 0.52
RNF43-202ENST00000577625 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
RNF43-202ENST00000577625 HDGFL2Q7Z4V5 671 aaPredicted RBP18.27■□□□□ 0.51
RNF43-202ENST00000577625 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
RNF43-202ENST00000577625 AMOTL2Q9Y2J4 779 aa18.26■□□□□ 0.51
RNF43-202ENST00000577625 NUDCQ9Y266 331 aa18.25■□□□□ 0.51
RNF43-202ENST00000577625 CHD2O14647 1828 aaKnown RBP18.25■□□□□ 0.51
RNF43-202ENST00000577625 CPSF1Q10570 1443 aaKnown RBP18.25■□□□□ 0.51
RNF43-202ENST00000577625 NBR1Q14596 966 aa18.25■□□□□ 0.51
RNF43-202ENST00000577625 CCDC136Q96JN2 1154 aa18.25■□□□□ 0.51
RNF43-202ENST00000577625 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
RNF43-202ENST00000577625 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
RNF43-202ENST00000577625 PIK3R4Q99570 1358 aa18.24■□□□□ 0.51
RNF43-202ENST00000577625 PRR36Q9H6K5 1346 aa18.23■□□□□ 0.51
RNF43-202ENST00000577625 FYB1O15117 783 aa18.23■□□□□ 0.51
RNF43-202ENST00000577625 ANKLE2Q86XL3 938 aa18.23■□□□□ 0.51
RNF43-202ENST00000577625 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
RNF43-202ENST00000577625 PDE3BQ13370 1112 aa18.21■□□□□ 0.51
RNF43-202ENST00000577625 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
RNF43-202ENST00000577625 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms