RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 VPS72Q15906 364 aa9.83□□□□□ -0.84
SNX11-204ENST00000577310 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.83□□□□□ -0.84
SNX11-204ENST00000577310 NOS1P29475 1434 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 XRN1Q8IZH2 1706 aaKnown RBP9.82□□□□□ -0.84
SNX11-204ENST00000577310 NWD2Q9ULI1 1742 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 CAMKK2Q96RR4 588 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 C1orf167Q5SNV9 1468 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 GCC2Q8IWJ2 1684 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 RREB1Q92766 1687 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 NALCNQ8IZF0 1738 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 DUOX2Q9NRD8 1548 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 PTPRUQ92729 1446 aa9.82□□□□□ -0.84
SNX11-204ENST00000577310 ADGRB2O60241 1585 aa9.81□□□□□ -0.84
SNX11-204ENST00000577310 NBPF8Q3BBV2 869 aa9.81□□□□□ -0.84
SNX11-204ENST00000577310 NBPF14Q5TI25 921 aa9.81□□□□□ -0.84
SNX11-204ENST00000577310 NUP188Q5SRE5 1749 aa9.81□□□□□ -0.84
SNX11-204ENST00000577310 TMEM131LA2VDJ0 1609 aa9.81□□□□□ -0.84
SNX11-204ENST00000577310 ADGRL3Q9HAR2 1447 aa9.81□□□□□ -0.84
SNX11-204ENST00000577310 LMTK2Q8IWU2 1503 aa9.8□□□□□ -0.84
SNX11-204ENST00000577310 PCNTO95613 3336 aa9.79□□□□□ -0.84
SNX11-204ENST00000577310 KANK1Q14678 1352 aa9.79□□□□□ -0.84
SNX11-204ENST00000577310 ORAI2Q96SN7 254 aa9.78□□□□□ -0.84
SNX11-204ENST00000577310 CEP162Q5TB80 1403 aa9.78□□□□□ -0.84
SNX11-204ENST00000577310 PRELPP51888 382 aa9.77□□□□□ -0.85
SNX11-204ENST00000577310 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.85
SNX11-204ENST00000577310 USP32Q8NFA0 1604 aa9.76□□□□□ -0.85
SNX11-204ENST00000577310 CCDC9Q9Y3X0 531 aaKnown RBP9.76□□□□□ -0.85
SNX11-204ENST00000577310 ERBINQ96RT1 1412 aa9.75□□□□□ -0.85
SNX11-204ENST00000577310 A0A0G2JS52 829 aa9.75□□□□□ -0.85
SNX11-204ENST00000577310 HSPA6P17066 643 aa9.75□□□□□ -0.85
SNX11-204ENST00000577310 MYT1Q01538 1121 aa9.75□□□□□ -0.85
SNX11-204ENST00000577310 NPHP3Q7Z494 1330 aa9.75□□□□□ -0.85
SNX11-204ENST00000577310 NRKQ7Z2Y5 1582 aa9.75□□□□□ -0.85
SNX11-204ENST00000577310 PXDNQ92626 1479 aa9.74□□□□□ -0.85
SNX11-204ENST00000577310 FAM83GA6ND36 823 aa9.74□□□□□ -0.85
SNX11-204ENST00000577310 CAPN15O75808 1086 aa9.74□□□□□ -0.85
SNX11-204ENST00000577310 MYOM1P52179 1685 aa9.74□□□□□ -0.85
SNX11-204ENST00000577310 APBA3O96018 575 aa9.73□□□□□ -0.85
SNX11-204ENST00000577310 SYT17Q9BSW7 474 aa9.73□□□□□ -0.85
SNX11-204ENST00000577310 SHANK3Q9BYB0 1731 aa9.73□□□□□ -0.85
SNX11-204ENST00000577310 CASZ1Q86V15 1759 aa9.73□□□□□ -0.85
SNX11-204ENST00000577310 FAM98CQ17RN3 349 aaKnown RBP9.72□□□□□ -0.85
SNX11-204ENST00000577310 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
SNX11-204ENST00000577310 ADGRL2O95490 1459 aa9.72□□□□□ -0.85
SNX11-204ENST00000577310 NRXN3Q9Y4C0 1643 aa9.71□□□□□ -0.85
SNX11-204ENST00000577310 TRIM37O94972 964 aa9.71□□□□□ -0.86
SNX11-204ENST00000577310 FAM196AQ6ZSG2 479 aa9.71□□□□□ -0.86
SNX11-204ENST00000577310 DLC1Q96QB1 1528 aa9.7□□□□□ -0.86
SNX11-204ENST00000577310 LRPPRCP42704 1394 aaKnown RBP9.69□□□□□ -0.86
SNX11-204ENST00000577310 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
SNX11-204ENST00000577310 NRAPQ86VF7 1730 aa9.69□□□□□ -0.86
SNX11-204ENST00000577310 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
SNX11-204ENST00000577310 KIF15Q9NS87 1388 aa9.69□□□□□ -0.86
SNX11-204ENST00000577310 THSD7AQ9UPZ6 1657 aa9.69□□□□□ -0.86
SNX11-204ENST00000577310 CROCC2H7BZ55 1655 aa9.68□□□□□ -0.86
SNX11-204ENST00000577310 NEXMIFQ5QGS0 1516 aa9.68□□□□□ -0.86
SNX11-204ENST00000577310 PTGER2P43116 358 aa9.68□□□□□ -0.86
SNX11-204ENST00000577310 FOXO3O43524 673 aa9.67□□□□□ -0.86
SNX11-204ENST00000577310 TNS4Q8IZW8 715 aa9.67□□□□□ -0.86
SNX11-204ENST00000577310 METP08581 1390 aa9.66□□□□□ -0.86
SNX11-204ENST00000577310 SPATA31A3Q5VYP0 1347 aa9.66□□□□□ -0.86
SNX11-204ENST00000577310 CHGAP10645 457 aaKnown RBP9.66□□□□□ -0.86
SNX11-204ENST00000577310 ESCO1Q5FWF5 840 aa9.66□□□□□ -0.86
SNX11-204ENST00000577310 RGPD3A6NKT7 1758 aaPredicted RBP9.65□□□□□ -0.86
SNX11-204ENST00000577310 RGPD4Q7Z3J3 1758 aa9.65□□□□□ -0.86
SNX11-204ENST00000577310 HAP1P54257 671 aaPredicted RBP9.65□□□□□ -0.86
SNX11-204ENST00000577310 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
SNX11-204ENST00000577310 ABCA3Q99758 1704 aa9.65□□□□□ -0.87
SNX11-204ENST00000577310 MAP3K5Q99683 1374 aa9.64□□□□□ -0.87
SNX11-204ENST00000577310 IQGAP3Q86VI3 1631 aa9.64□□□□□ -0.87
SNX11-204ENST00000577310 GPR162Q16538 588 aa9.64□□□□□ -0.87
SNX11-204ENST00000577310 RRP7BPQ9NSQ0 103 aa9.64□□□□□ -0.87
SNX11-204ENST00000577310 ZBTB7AO95365 584 aa9.63□□□□□ -0.87
SNX11-204ENST00000577310 DNAJC5GQ8N7S2 189 aa9.63□□□□□ -0.87
SNX11-204ENST00000577310 SPATA31A5Q5VU36 1347 aa9.62□□□□□ -0.87
SNX11-204ENST00000577310 SPATA31A7Q8IWB4 1347 aa9.62□□□□□ -0.87
SNX11-204ENST00000577310 APLP1P51693 650 aa9.62□□□□□ -0.87
SNX11-204ENST00000577310 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
SNX11-204ENST00000577310 ATF5Q9Y2D1 282 aaPredicted RBP9.61□□□□□ -0.87
SNX11-204ENST00000577310 ABCC5O15440 1437 aa9.61□□□□□ -0.87
SNX11-204ENST00000577310 COL14A1Q05707 1796 aaKnown RBP9.6□□□□□ -0.87
SNX11-204ENST00000577310 CDC42BPGQ6DT37 1551 aa9.6□□□□□ -0.87
SNX11-204ENST00000577310 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
SNX11-204ENST00000577310 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
SNX11-204ENST00000577310 PDGFDQ9GZP0 370 aaPredicted RBP9.6□□□□□ -0.87
SNX11-204ENST00000577310 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
SNX11-204ENST00000577310 BTG4Q9NY30 223 aa9.6□□□□□ -0.87
SNX11-204ENST00000577310 KIF1AQ12756 1690 aa9.59□□□□□ -0.87
SNX11-204ENST00000577310 CABLES1Q8TDN4 633 aa9.59□□□□□ -0.87
SNX11-204ENST00000577310 PRAG1Q86YV5 1406 aa9.58□□□□□ -0.88
SNX11-204ENST00000577310 ATP10DQ9P241 1426 aa9.58□□□□□ -0.88
SNX11-204ENST00000577310 ARXQ96QS3 562 aa9.58□□□□□ -0.88
SNX11-204ENST00000577310 MTFR1LQ9H019 292 aa9.58□□□□□ -0.88
SNX11-204ENST00000577310 AATKQ6ZMQ8 1374 aa9.58□□□□□ -0.88
SNX11-204ENST00000577310 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
SNX11-204ENST00000577310 HFM1A2PYH4 1435 aa9.57□□□□□ -0.88
SNX11-204ENST00000577310 RRBP1Q9P2E9 1410 aaKnown RBP9.57□□□□□ -0.88
SNX11-204ENST00000577310 SBF2Q86WG5 1849 aa9.57□□□□□ -0.88
SNX11-204ENST00000577310 PLSCR1O15162 318 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms