RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 NUDCQ9Y266 331 aa28.55■■■□□ 2.16
KRT18P55-201ENST00000577198 MINK1Q8N4C8 1332 aaPredicted RBP28.54■■■□□ 2.16
KRT18P55-201ENST00000577198 ANKRD36BQ8N2N9 1353 aa28.54■■■□□ 2.16
KRT18P55-201ENST00000577198 ADAMTS8Q9UP79 889 aa28.53■■■□□ 2.16
KRT18P55-201ENST00000577198 TMEM2Q9UHN6 1383 aa28.53■■■□□ 2.16
KRT18P55-201ENST00000577198 FER1L4A9Z1Z3 1794 aa28.53■■■□□ 2.16
KRT18P55-201ENST00000577198 POGKQ9P215 609 aa28.53■■■□□ 2.16
KRT18P55-201ENST00000577198 METP08581 1390 aa28.52■■■□□ 2.16
KRT18P55-201ENST00000577198 ABCC11Q96J66 1382 aa28.51■■■□□ 2.15
KRT18P55-201ENST00000577198 PLEKHH1Q9ULM0 1364 aa28.5■■■□□ 2.15
KRT18P55-201ENST00000577198 NLRP1Q9C000 1473 aa28.49■■■□□ 2.15
KRT18P55-201ENST00000577198 IRX6P78412 446 aaPredicted RBP28.49■■■□□ 2.15
KRT18P55-201ENST00000577198 SRPK2P78362 688 aaKnown RBP28.48■■■□□ 2.15
KRT18P55-201ENST00000577198 WAPLQ7Z5K2 1190 aa28.48■■■□□ 2.15
KRT18P55-201ENST00000577198 NINLQ9Y2I6 1382 aa28.46■■■□□ 2.15
KRT18P55-201ENST00000577198 SALL2Q9Y467 1007 aaPredicted RBP28.46■■■□□ 2.15
KRT18P55-201ENST00000577198 CD163L1Q9NR16 1453 aa28.46■■■□□ 2.15
KRT18P55-201ENST00000577198 A0A1W2PP64 1363 aa28.46■■■□□ 2.15
KRT18P55-201ENST00000577198 ATAD2Q6PL18 1390 aa28.45■■■□□ 2.14
KRT18P55-201ENST00000577198 KNDC1Q76NI1 1749 aa28.44■■■□□ 2.14
KRT18P55-201ENST00000577198 CDK19Q9BWU1 502 aa28.44■■■□□ 2.14
KRT18P55-201ENST00000577198 HDGFP51858 240 aaKnown RBP28.43■■■□□ 2.14
KRT18P55-201ENST00000577198 CGNL1Q0VF96 1302 aa28.43■■■□□ 2.14
KRT18P55-201ENST00000577198 ADAMTS13Q76LX8 1427 aa28.42■■■□□ 2.14
KRT18P55-201ENST00000577198 LTKP29376 864 aa28.42■■■□□ 2.14
KRT18P55-201ENST00000577198 MORC1Q86VD1 984 aa28.42■■■□□ 2.14
KRT18P55-201ENST00000577198 WDR43Q15061 677 aaKnown RBP eCLIP28.41■■■□□ 2.14
KRT18P55-201ENST00000577198 TECPR2O15040 1411 aa28.41■■■□□ 2.14
KRT18P55-201ENST00000577198 RNF123Q5XPI4 1314 aa28.4■■■□□ 2.14
KRT18P55-201ENST00000577198 POLR3AO14802 1390 aaPredicted RBP28.4■■■□□ 2.14
KRT18P55-201ENST00000577198 NSD2O96028 1365 aa28.37■■■□□ 2.13
KRT18P55-201ENST00000577198 CPS1P31327 1500 aa28.37■■■□□ 2.13
KRT18P55-201ENST00000577198 PDE3BQ13370 1112 aa28.37■■■□□ 2.13
KRT18P55-201ENST00000577198 SHPRHQ149N8 1683 aa28.37■■■□□ 2.13
KRT18P55-201ENST00000577198 PLEKHG1Q9ULL1 1385 aa28.36■■■□□ 2.13
KRT18P55-201ENST00000577198 TXNDC2Q86VQ3 553 aa28.36■■■□□ 2.13
KRT18P55-201ENST00000577198 CDCA7LQ96GN5 454 aa28.36■■■□□ 2.13
KRT18P55-201ENST00000577198 ARHGAP23Q9P227 1491 aa28.35■■■□□ 2.13
KRT18P55-201ENST00000577198 TNNT2P45379 298 aaPredicted RBP28.35■■■□□ 2.13
KRT18P55-201ENST00000577198 SLIT1O75093 1534 aa28.35■■■□□ 2.13
KRT18P55-201ENST00000577198 FAM135BQ49AJ0 1406 aa28.35■■■□□ 2.13
KRT18P55-201ENST00000577198 SIRT1Q96EB6 747 aa28.34■■■□□ 2.13
KRT18P55-201ENST00000577198 MED14O60244 1454 aa28.34■■■□□ 2.13
KRT18P55-201ENST00000577198 ERICH6BQ5W0A0 696 aa28.33■■■□□ 2.13
KRT18P55-201ENST00000577198 PLPPR3Q6T4P5 718 aa28.33■■■□□ 2.13
KRT18P55-201ENST00000577198 CABP1Q9NZU7 370 aa28.32■■■□□ 2.12
KRT18P55-201ENST00000577198 ANKRD26Q9UPS8 1709 aa28.31■■■□□ 2.12
KRT18P55-201ENST00000577198 TERF2IPQ9NYB0 399 aa28.31■■■□□ 2.12
KRT18P55-201ENST00000577198 ZNF521Q96K83 1311 aa28.29■■■□□ 2.12
KRT18P55-201ENST00000577198 ROBO2Q9HCK4 1378 aa28.28■■■□□ 2.12
KRT18P55-201ENST00000577198 WASLO00401 505 aaPredicted RBP28.28■■■□□ 2.12
KRT18P55-201ENST00000577198 CCDC146Q8IYE0 955 aa28.28■■■□□ 2.12
KRT18P55-201ENST00000577198 FYB1O15117 783 aa28.27■■■□□ 2.12
KRT18P55-201ENST00000577198 MTHFSP49914 203 aa28.27■■■□□ 2.12
KRT18P55-201ENST00000577198 ATP7BP35670 1465 aa28.26■■■□□ 2.11
KRT18P55-201ENST00000577198 GGNBP2Q9H3C7 697 aa28.26■■■□□ 2.11
KRT18P55-201ENST00000577198 PTPRUQ92729 1446 aa28.25■■■□□ 2.11
KRT18P55-201ENST00000577198 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
KRT18P55-201ENST00000577198 RIMS1Q86UR5 1692 aaKnown RBP28.25■■■□□ 2.11
KRT18P55-201ENST00000577198 KIF20BQ96Q89 1820 aa28.24■■■□□ 2.11
KRT18P55-201ENST00000577198 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.23■■■□□ 2.11
KRT18P55-201ENST00000577198 HDGFL2Q7Z4V5 671 aaPredicted RBP28.23■■■□□ 2.11
KRT18P55-201ENST00000577198 PELP1Q8IZL8 1130 aaKnown RBP28.23■■■□□ 2.11
KRT18P55-201ENST00000577198 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
KRT18P55-201ENST00000577198 EID1Q9Y6B2 187 aa28.22■■■□□ 2.11
KRT18P55-201ENST00000577198 APAF1O14727 1248 aa28.2■■■□□ 2.11
KRT18P55-201ENST00000577198 CPSF1Q10570 1443 aaKnown RBP28.2■■■□□ 2.11
KRT18P55-201ENST00000577198 PPP4R2Q9NY27 417 aa28.2■■■□□ 2.11
KRT18P55-201ENST00000577198 THEMISQ8N1K5 641 aaPredicted RBP28.2■■■□□ 2.1
KRT18P55-201ENST00000577198 PPIP5K1Q6PFW1 1433 aa28.19■■■□□ 2.1
KRT18P55-201ENST00000577198 RCAN3Q9UKA8 241 aa28.19■■■□□ 2.1
KRT18P55-201ENST00000577198 ADGRB2O60241 1585 aa28.19■■■□□ 2.1
KRT18P55-201ENST00000577198 CEP170BQ9Y4F5 1589 aaPredicted RBP28.18■■■□□ 2.1
KRT18P55-201ENST00000577198 NUDT16Q96DE0 195 aaKnown RBP28.17■■■□□ 2.1
KRT18P55-201ENST00000577198 ADAMTSL3P82987 1691 aa28.17■■■□□ 2.1
KRT18P55-201ENST00000577198 NCKAP5LQ9HCH0 1330 aa28.17■■■□□ 2.1
KRT18P55-201ENST00000577198 TBX22Q9Y458 520 aa28.15■■■□□ 2.1
KRT18P55-201ENST00000577198 PRR36Q9H6K5 1346 aa28.15■■■□□ 2.1
KRT18P55-201ENST00000577198 CDC42BPGQ6DT37 1551 aa28.15■■■□□ 2.1
KRT18P55-201ENST00000577198 COL3A1P02461 1466 aaPredicted RBP28.15■■■□□ 2.1
KRT18P55-201ENST00000577198 DUSP27Q5VZP5 1158 aa28.14■■■□□ 2.1
KRT18P55-201ENST00000577198 RRP1P56182 461 aaKnown RBP28.13■■■□□ 2.09
KRT18P55-201ENST00000577198 MON2Q7Z3U7 1717 aa28.13■■■□□ 2.09
KRT18P55-201ENST00000577198 CFAP53Q96M91 514 aa28.13■■■□□ 2.09
KRT18P55-201ENST00000577198 AKAP12Q02952 1782 aa28.12■■■□□ 2.09
KRT18P55-201ENST00000577198 DIP2AQ14689 1571 aa28.12■■■□□ 2.09
KRT18P55-201ENST00000577198 CCDC61Q9Y6R9 512 aa28.12■■■□□ 2.09
KRT18P55-201ENST00000577198 GOLGA2Q08379 1002 aa28.11■■■□□ 2.09
KRT18P55-201ENST00000577198 IQSEC2Q5JU85 1478 aa28.11■■■□□ 2.09
KRT18P55-201ENST00000577198 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.11■■■□□ 2.09
KRT18P55-201ENST00000577198 TRMT2AQ8IZ69 625 aaKnown RBP28.1■■■□□ 2.09
KRT18P55-201ENST00000577198 SPINK5Q9NQ38 1064 aaPredicted RBP28.1■■■□□ 2.09
KRT18P55-201ENST00000577198 AMOTL2Q9Y2J4 779 aa28.1■■■□□ 2.09
KRT18P55-201ENST00000577198 EDC4Q6P2E9 1401 aaKnown RBP28.1■■■□□ 2.09
KRT18P55-201ENST00000577198 SLFN5Q08AF3 891 aa28.1■■■□□ 2.09
KRT18P55-201ENST00000577198 TOPAZ1Q8N9V7 1692 aa28.09■■■□□ 2.09
KRT18P55-201ENST00000577198 PTCH1Q13635 1447 aa28.08■■■□□ 2.09
KRT18P55-201ENST00000577198 ITSN1Q15811 1721 aa28.08■■■□□ 2.09
KRT18P55-201ENST00000577198 DMRT2Q9Y5R5 561 aa28.08■■■□□ 2.09
KRT18P55-201ENST00000577198 XRN1Q8IZH2 1706 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms