RNA–Protein interactions for RNA: ENST00000576625.5

LCMT1-212, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-212ENST00000576625 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
LCMT1-212ENST00000576625 XRN1Q8IZH2 1706 aaKnown RBP13.37□□□□□ -0.27
LCMT1-212ENST00000576625 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
LCMT1-212ENST00000576625 GCC2Q8IWJ2 1684 aa13.37□□□□□ -0.27
LCMT1-212ENST00000576625 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
LCMT1-212ENST00000576625 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
LCMT1-212ENST00000576625 GJD4Q96KN9 370 aaPredicted RBP13.36□□□□□ -0.27
LCMT1-212ENST00000576625 SPHKAPQ2M3C7 1700 aa13.36□□□□□ -0.27
LCMT1-212ENST00000576625 MYOM2P54296 1465 aa13.36□□□□□ -0.27
LCMT1-212ENST00000576625 YY1P25490 414 aa13.35□□□□□ -0.27
LCMT1-212ENST00000576625 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
LCMT1-212ENST00000576625 MYOM3Q5VTT5 1437 aa13.35□□□□□ -0.27
LCMT1-212ENST00000576625 RPRD2Q5VT52 1461 aaKnown RBP13.35□□□□□ -0.27
LCMT1-212ENST00000576625 GLI3P10071 1580 aa13.34□□□□□ -0.27
LCMT1-212ENST00000576625 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
LCMT1-212ENST00000576625 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
LCMT1-212ENST00000576625 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
LCMT1-212ENST00000576625 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
LCMT1-212ENST00000576625 ADGRL3Q9HAR2 1447 aa13.33□□□□□ -0.28
LCMT1-212ENST00000576625 RRP7BPQ9NSQ0 103 aa13.33□□□□□ -0.28
LCMT1-212ENST00000576625 BRWD3Q6RI45 1802 aa13.33□□□□□ -0.28
LCMT1-212ENST00000576625 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
LCMT1-212ENST00000576625 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.28
LCMT1-212ENST00000576625 ABCC5O15440 1437 aa13.32□□□□□ -0.28
LCMT1-212ENST00000576625 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
LCMT1-212ENST00000576625 RALGAPBQ86X10 1494 aa13.31□□□□□ -0.28
LCMT1-212ENST00000576625 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
LCMT1-212ENST00000576625 NRXN3Q9Y4C0 1643 aa13.3□□□□□ -0.28
LCMT1-212ENST00000576625 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
LCMT1-212ENST00000576625 NALCNQ8IZF0 1738 aa13.29□□□□□ -0.28
LCMT1-212ENST00000576625 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
LCMT1-212ENST00000576625 SLIT2O94813 1529 aa13.28□□□□□ -0.28
LCMT1-212ENST00000576625 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
LCMT1-212ENST00000576625 METP08581 1390 aa13.25□□□□□ -0.29
LCMT1-212ENST00000576625 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
LCMT1-212ENST00000576625 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
LCMT1-212ENST00000576625 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
LCMT1-212ENST00000576625 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
LCMT1-212ENST00000576625 PTPN23Q9H3S7 1636 aa13.24□□□□□ -0.29
LCMT1-212ENST00000576625 BAG6P46379 1132 aa13.23□□□□□ -0.29
LCMT1-212ENST00000576625 R3HDM1Q15032 1099 aaKnown RBP13.23□□□□□ -0.29
LCMT1-212ENST00000576625 PXDNQ92626 1479 aa13.23□□□□□ -0.29
LCMT1-212ENST00000576625 DAPK1P53355 1430 aa13.22□□□□□ -0.29
LCMT1-212ENST00000576625 PROM2Q8N271 834 aa13.21□□□□□ -0.29
LCMT1-212ENST00000576625 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
LCMT1-212ENST00000576625 DISP2A7MBM2 1401 aa13.21□□□□□ -0.3
LCMT1-212ENST00000576625 CHGAP10645 457 aaKnown RBP13.2□□□□□ -0.3
LCMT1-212ENST00000576625 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
LCMT1-212ENST00000576625 ANKRD30AQ9BXX3 1397 aa13.2□□□□□ -0.3
LCMT1-212ENST00000576625 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
LCMT1-212ENST00000576625 VPS72Q15906 364 aa13.18□□□□□ -0.3
LCMT1-212ENST00000576625 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
LCMT1-212ENST00000576625 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
LCMT1-212ENST00000576625 NPHP3Q7Z494 1330 aa13.16□□□□□ -0.3
LCMT1-212ENST00000576625 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
LCMT1-212ENST00000576625 ADGRL2O95490 1459 aa13.16□□□□□ -0.3
LCMT1-212ENST00000576625 E9PCH4 1651 aa13.15□□□□□ -0.3
LCMT1-212ENST00000576625 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
LCMT1-212ENST00000576625 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
LCMT1-212ENST00000576625 TNS1Q9HBL0 1735 aaKnown RBP13.14□□□□□ -0.31
LCMT1-212ENST00000576625 SENP3-EIF4A1A0A087X0R7 540 aa13.14□□□□□ -0.31
LCMT1-212ENST00000576625 ZNF784Q8NCA9 323 aaPredicted RBP13.14□□□□□ -0.31
LCMT1-212ENST00000576625 ROBO2Q9HCK4 1378 aa13.13□□□□□ -0.31
LCMT1-212ENST00000576625 CHIC2Q9UKJ5 165 aa13.13□□□□□ -0.31
LCMT1-212ENST00000576625 NINLQ9Y2I6 1382 aa13.12□□□□□ -0.31
LCMT1-212ENST00000576625 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
LCMT1-212ENST00000576625 ANKRD50Q9ULJ7 1429 aa13.12□□□□□ -0.31
LCMT1-212ENST00000576625 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
LCMT1-212ENST00000576625 CEP350Q5VT06 3117 aa13.1□□□□□ -0.31
LCMT1-212ENST00000576625 PLCH1Q4KWH8 1693 aa13.1□□□□□ -0.31
LCMT1-212ENST00000576625 C1QTNF8P60827 252 aa13.1□□□□□ -0.31
LCMT1-212ENST00000576625 XPCQ01831 940 aaPredicted RBP13.1□□□□□ -0.31
LCMT1-212ENST00000576625 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
LCMT1-212ENST00000576625 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
LCMT1-212ENST00000576625 FBXO3Q9UK99 471 aa13.1□□□□□ -0.31
LCMT1-212ENST00000576625 SPATA31A3Q5VYP0 1347 aa13.1□□□□□ -0.31
LCMT1-212ENST00000576625 FOXO3O43524 673 aa13.09□□□□□ -0.31
LCMT1-212ENST00000576625 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.31
LCMT1-212ENST00000576625 CDC42BPGQ6DT37 1551 aa13.08□□□□□ -0.32
LCMT1-212ENST00000576625 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
LCMT1-212ENST00000576625 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
LCMT1-212ENST00000576625 PARD3Q8TEW0 1356 aa13.07□□□□□ -0.32
LCMT1-212ENST00000576625 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
LCMT1-212ENST00000576625 UTRNP46939 3433 aa13.06□□□□□ -0.32
LCMT1-212ENST00000576625 LRPPRCP42704 1394 aaKnown RBP13.06□□□□□ -0.32
LCMT1-212ENST00000576625 RREB1Q92766 1687 aa13.05□□□□□ -0.32
LCMT1-212ENST00000576625 VPS8Q8N3P4 1428 aa13.05□□□□□ -0.32
LCMT1-212ENST00000576625 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
LCMT1-212ENST00000576625 NRAPQ86VF7 1730 aa13.05□□□□□ -0.32
LCMT1-212ENST00000576625 ADGRB2O60241 1585 aa13.04□□□□□ -0.32
LCMT1-212ENST00000576625 FAM98CQ17RN3 349 aaKnown RBP13.04□□□□□ -0.32
LCMT1-212ENST00000576625 THSD7AQ9UPZ6 1657 aa13.04□□□□□ -0.32
LCMT1-212ENST00000576625 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
LCMT1-212ENST00000576625 SPON1Q9HCB6 807 aa13.03□□□□□ -0.32
LCMT1-212ENST00000576625 CCDC9Q9Y3X0 531 aaKnown RBP13.03□□□□□ -0.32
LCMT1-212ENST00000576625 ABCA3Q99758 1704 aa13.02□□□□□ -0.32
LCMT1-212ENST00000576625 KCNQ2O43526 872 aa13.02□□□□□ -0.33
LCMT1-212ENST00000576625 FAM83GA6ND36 823 aa13.01□□□□□ -0.33
LCMT1-212ENST00000576625 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
LCMT1-212ENST00000576625 CCDC144AA2RUR9 1427 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms