RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 SSH1Q8WYL5 1049 aa21.9■■□□□ 1.1
ATPAF1-214ENST00000576409 VPS37CA5D8V6 355 aaPredicted RBP21.9■■□□□ 1.1
ATPAF1-214ENST00000576409 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.1
ATPAF1-214ENST00000576409 GNAI1P63096 354 aa21.89■■□□□ 1.1
ATPAF1-214ENST00000576409 PANK2Q9BZ23 570 aa21.89■■□□□ 1.1
ATPAF1-214ENST00000576409 ROCK1Q13464 1354 aa21.89■■□□□ 1.09
ATPAF1-214ENST00000576409 ZNF592Q92610 1267 aa21.89■■□□□ 1.09
ATPAF1-214ENST00000576409 C8orf34Q49A92 452 aa21.88■■□□□ 1.09
ATPAF1-214ENST00000576409 PCDHB15Q9Y5E8 787 aa21.88■■□□□ 1.09
ATPAF1-214ENST00000576409 PHF14O94880 888 aa21.87■■□□□ 1.09
ATPAF1-214ENST00000576409 CCDC27Q2M243 656 aa21.87■■□□□ 1.09
ATPAF1-214ENST00000576409 CHD1LQ86WJ1 897 aa21.87■■□□□ 1.09
ATPAF1-214ENST00000576409 TULP1O00294 542 aaPredicted RBP21.87■■□□□ 1.09
ATPAF1-214ENST00000576409 TWISTNBQ3B726 338 aaPredicted RBP21.87■■□□□ 1.09
ATPAF1-214ENST00000576409 FBXW7Q969H0 707 aa21.85■■□□□ 1.09
ATPAF1-214ENST00000576409 AAMPQ13685 434 aa21.85■■□□□ 1.09
ATPAF1-214ENST00000576409 HDGFP51858 240 aaKnown RBP21.85■■□□□ 1.09
ATPAF1-214ENST00000576409 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
ATPAF1-214ENST00000576409 WDR63Q8IWG1 891 aa21.84■■□□□ 1.09
ATPAF1-214ENST00000576409 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
ATPAF1-214ENST00000576409 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.84■■□□□ 1.09
ATPAF1-214ENST00000576409 FOSBP53539 338 aa21.83■■□□□ 1.09
ATPAF1-214ENST00000576409 NUTM2GQ5VZR2 741 aa21.83■■□□□ 1.09
ATPAF1-214ENST00000576409 PRAM1Q96QH2 718 aa21.83■■□□□ 1.09
ATPAF1-214ENST00000576409 DIAPH3Q9NSV4 1193 aa21.83■■□□□ 1.09
ATPAF1-214ENST00000576409 CABP1Q9NZU7 370 aa21.83■■□□□ 1.09
ATPAF1-214ENST00000576409 GNL2Q13823 731 aaKnown RBP21.83■■□□□ 1.09
ATPAF1-214ENST00000576409 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.08
ATPAF1-214ENST00000576409 K7ELQ4 463 aaPredicted RBP21.83■■□□□ 1.08
ATPAF1-214ENST00000576409 TSPYL4Q9UJ04 414 aa21.82■■□□□ 1.08
ATPAF1-214ENST00000576409 ARHGAP5Q13017 1502 aa21.82■■□□□ 1.08
ATPAF1-214ENST00000576409 TMPOP42166 694 aaKnown RBP21.82■■□□□ 1.08
ATPAF1-214ENST00000576409 ARHGEF11O15085 1522 aa21.82■■□□□ 1.08
ATPAF1-214ENST00000576409 FBLN1P23142 703 aa21.81■■□□□ 1.08
ATPAF1-214ENST00000576409 LRPPRCP42704 1394 aaKnown RBP21.8■■□□□ 1.08
ATPAF1-214ENST00000576409 DHX29Q7Z478 1369 aaKnown RBP21.8■■□□□ 1.08
ATPAF1-214ENST00000576409 DCTN1Q14203 1278 aa21.8■■□□□ 1.08
ATPAF1-214ENST00000576409 TRIM27P14373 513 aa21.79■■□□□ 1.08
ATPAF1-214ENST00000576409 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
ATPAF1-214ENST00000576409 SSFA2P28290 1259 aa21.78■■□□□ 1.08
ATPAF1-214ENST00000576409 FIBPO43427 364 aa21.78■■□□□ 1.08
ATPAF1-214ENST00000576409 STAC3Q96MF2 364 aa21.78■■□□□ 1.08
ATPAF1-214ENST00000576409 SMC3Q9UQE7 1217 aa21.77■■□□□ 1.08
ATPAF1-214ENST00000576409 NSD3Q9BZ95 1437 aa21.77■■□□□ 1.08
ATPAF1-214ENST00000576409 RLBP1P12271 317 aa21.77■■□□□ 1.08
ATPAF1-214ENST00000576409 TNPO1Q92973 898 aaKnown RBP21.77■■□□□ 1.08
ATPAF1-214ENST00000576409 GPATCH3Q96I76 525 aa21.77■■□□□ 1.08
ATPAF1-214ENST00000576409 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.07
ATPAF1-214ENST00000576409 XRCC6P12956 609 aaKnown RBP eCLIP21.77■■□□□ 1.07
ATPAF1-214ENST00000576409 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 MAP4K4O95819 1239 aaPredicted RBP21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 H3BQV1 296 aa21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 SMARCA5O60264 1052 aaPredicted RBP21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 SLC4A2P04920 1241 aa21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 IFFO2Q5TF58 517 aa21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 C9orf78Q9NZ63 289 aaPredicted RBP21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 NKTRP30414 1462 aaKnown RBP21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 RABEP1Q15276 862 aa21.76■■□□□ 1.07
ATPAF1-214ENST00000576409 CAMSAP2Q08AD1 1489 aa21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 SCAPERQ9BY12 1400 aa21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 RRS1Q15050 365 aaKnown RBP21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 SF3A1Q15459 793 aaKnown RBP21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 TBC1D32Q96NH3 1257 aa21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 BECN2A8MW95 431 aa21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 GCC1Q96CN9 775 aa21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 MIS18AQ9NYP9 233 aa21.75■■□□□ 1.07
ATPAF1-214ENST00000576409 HECW1Q76N89 1606 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 GORABQ5T7V8 394 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 PKNOX2Q96KN3 472 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 SULT6B1Q6IMI4 303 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 BICD2Q8TD16 824 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 ATP6V1DQ9Y5K8 247 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 PER1O15534 1290 aaPredicted RBP21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 SURF6O75683 361 aaKnown RBP21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 CSPP1Q1MSJ5 1256 aa21.74■■□□□ 1.07
ATPAF1-214ENST00000576409 CREBRFQ8IUR6 639 aa21.73■■□□□ 1.07
ATPAF1-214ENST00000576409 SPC24Q8NBT2 197 aa21.73■■□□□ 1.07
ATPAF1-214ENST00000576409 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
ATPAF1-214ENST00000576409 CCDC173Q0VFZ6 552 aa21.73■■□□□ 1.07
ATPAF1-214ENST00000576409 FAM184AQ8NB25 1140 aa21.73■■□□□ 1.07
ATPAF1-214ENST00000576409 GOLGA6L19H0YKK7 550 aa21.72■■□□□ 1.07
ATPAF1-214ENST00000576409 TEFQ10587 303 aa21.72■■□□□ 1.07
ATPAF1-214ENST00000576409 RBM42Q9BTD8 480 aaKnown RBP21.72■■□□□ 1.07
ATPAF1-214ENST00000576409 SYCE3A1L190 88 aa21.71■■□□□ 1.07
ATPAF1-214ENST00000576409 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
ATPAF1-214ENST00000576409 HTATSF1O43719 755 aaKnown RBP21.71■■□□□ 1.07
ATPAF1-214ENST00000576409 ZKSCAN1P17029 563 aaPredicted RBP21.71■■□□□ 1.07
ATPAF1-214ENST00000576409 TESK2Q96S53 571 aa21.71■■□□□ 1.07
ATPAF1-214ENST00000576409 EXOC6BQ9Y2D4 811 aa21.71■■□□□ 1.07
ATPAF1-214ENST00000576409 IL1RAPL2Q9NP60 686 aa21.7■■□□□ 1.06
ATPAF1-214ENST00000576409 IFT57Q9NWB7 429 aa21.7■■□□□ 1.06
ATPAF1-214ENST00000576409 IFIT2P09913 472 aaKnown RBP21.69■■□□□ 1.06
ATPAF1-214ENST00000576409 XPCQ01831 940 aaPredicted RBP21.69■■□□□ 1.06
ATPAF1-214ENST00000576409 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
ATPAF1-214ENST00000576409 CDK19Q9BWU1 502 aa21.69■■□□□ 1.06
ATPAF1-214ENST00000576409 AIMP1Q12904 312 aaKnown RBP21.68■■□□□ 1.06
ATPAF1-214ENST00000576409 TXNDC2Q86VQ3 553 aa21.68■■□□□ 1.06
ATPAF1-214ENST00000576409 SYNJ2O15056 1496 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms