RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 XIRP1Q702N8 1843 aaKnown RBP19.81■□□□□ 0.76
RPAIN-217ENST00000575711 ARHGEF28Q8N1W1 1705 aaKnown RBP19.8■□□□□ 0.76
RPAIN-217ENST00000575711 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
RPAIN-217ENST00000575711 DCCP43146 1447 aa19.77■□□□□ 0.76
RPAIN-217ENST00000575711 ATF3P18847 181 aa19.77■□□□□ 0.76
RPAIN-217ENST00000575711 NALCNQ8IZF0 1738 aa19.76■□□□□ 0.75
RPAIN-217ENST00000575711 TOM1O60784 492 aa19.76■□□□□ 0.75
RPAIN-217ENST00000575711 CADPS2Q86UW7 1296 aa19.76■□□□□ 0.75
RPAIN-217ENST00000575711 UBAP1LF5GYI3 381 aa19.75■□□□□ 0.75
RPAIN-217ENST00000575711 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.75■□□□□ 0.75
RPAIN-217ENST00000575711 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
RPAIN-217ENST00000575711 USP47Q96K76 1375 aa19.74■□□□□ 0.75
RPAIN-217ENST00000575711 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
RPAIN-217ENST00000575711 CDC42BPGQ6DT37 1551 aa19.73■□□□□ 0.75
RPAIN-217ENST00000575711 HIRIP3Q9BW71 556 aaPredicted RBP19.72■□□□□ 0.75
RPAIN-217ENST00000575711 ADGRB2O60241 1585 aa19.7■□□□□ 0.74
RPAIN-217ENST00000575711 QRICH2Q9H0J4 1663 aa19.7■□□□□ 0.74
RPAIN-217ENST00000575711 ST20-MTHFSA0A0A6YYL1 179 aa19.69■□□□□ 0.74
RPAIN-217ENST00000575711 WASLO00401 505 aaPredicted RBP19.68■□□□□ 0.74
RPAIN-217ENST00000575711 SLAIN2Q9P270 581 aa19.68■□□□□ 0.74
RPAIN-217ENST00000575711 SBNO2Q9Y2G9 1366 aa19.68■□□□□ 0.74
RPAIN-217ENST00000575711 MST1RQ04912 1400 aa19.68■□□□□ 0.74
RPAIN-217ENST00000575711 EIF4G2P78344 907 aaKnown RBP eCLIP19.67■□□□□ 0.74
RPAIN-217ENST00000575711 PIP4K2BP78356 416 aa19.66■□□□□ 0.74
RPAIN-217ENST00000575711 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
RPAIN-217ENST00000575711 NUTM2FA1L443 756 aa19.65■□□□□ 0.74
RPAIN-217ENST00000575711 EVC2Q86UK5 1308 aa19.65■□□□□ 0.74
RPAIN-217ENST00000575711 SLC24A1O60721 1099 aa19.64■□□□□ 0.73
RPAIN-217ENST00000575711 FBXO41Q8TF61 875 aa19.64■□□□□ 0.73
RPAIN-217ENST00000575711 CDK19Q9BWU1 502 aa19.64■□□□□ 0.73
RPAIN-217ENST00000575711 C1orf167Q5SNV9 1468 aa19.64■□□□□ 0.73
RPAIN-217ENST00000575711 FMN2Q9NZ56 1722 aa19.64■□□□□ 0.73
RPAIN-217ENST00000575711 TULP4Q9NRJ4 1543 aa19.62■□□□□ 0.73
RPAIN-217ENST00000575711 ANKARQ7Z5J8 1434 aa19.62■□□□□ 0.73
RPAIN-217ENST00000575711 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
RPAIN-217ENST00000575711 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
RPAIN-217ENST00000575711 TESK2Q96S53 571 aa19.62■□□□□ 0.73
RPAIN-217ENST00000575711 TMF1P82094 1093 aa19.59■□□□□ 0.73
RPAIN-217ENST00000575711 ESCO1Q5FWF5 840 aa19.59■□□□□ 0.73
RPAIN-217ENST00000575711 BRINP3Q76B58 766 aa19.59■□□□□ 0.73
RPAIN-217ENST00000575711 CABP2Q9NPB3 220 aa19.59■□□□□ 0.73
RPAIN-217ENST00000575711 NUDT16Q96DE0 195 aaKnown RBP19.58■□□□□ 0.72
RPAIN-217ENST00000575711 ORAI2Q96SN7 254 aa19.58■□□□□ 0.72
RPAIN-217ENST00000575711 PRR36Q9H6K5 1346 aa19.57■□□□□ 0.72
RPAIN-217ENST00000575711 ROBO1Q9Y6N7 1651 aa19.57■□□□□ 0.72
RPAIN-217ENST00000575711 ATP7BP35670 1465 aa19.57■□□□□ 0.72
RPAIN-217ENST00000575711 USP32Q8NFA0 1604 aa19.55■□□□□ 0.72
RPAIN-217ENST00000575711 PHF8Q9UPP1 1060 aa19.55■□□□□ 0.72
RPAIN-217ENST00000575711 CCDC61Q9Y6R9 512 aa19.55■□□□□ 0.72
RPAIN-217ENST00000575711 ATAD2Q6PL18 1390 aa19.55■□□□□ 0.72
RPAIN-217ENST00000575711 CDCA8Q53HL2 280 aa19.54■□□□□ 0.72
RPAIN-217ENST00000575711 DISP3Q9P2K9 1392 aa19.54■□□□□ 0.72
RPAIN-217ENST00000575711 PUS7Q96PZ0 661 aaKnown RBP19.53■□□□□ 0.72
RPAIN-217ENST00000575711 PPIP5K1Q6PFW1 1433 aa19.51■□□□□ 0.71
RPAIN-217ENST00000575711 PMFBP1Q8TBY8 1022 aa19.51■□□□□ 0.71
RPAIN-217ENST00000575711 KIF1AQ12756 1690 aa19.51■□□□□ 0.71
RPAIN-217ENST00000575711 ITSN1Q15811 1721 aa19.51■□□□□ 0.71
RPAIN-217ENST00000575711 RGPD8O14715 1765 aaPredicted RBP19.5■□□□□ 0.71
RPAIN-217ENST00000575711 FOXO3O43524 673 aa19.5■□□□□ 0.71
RPAIN-217ENST00000575711 NPHP3Q7Z494 1330 aa19.5■□□□□ 0.71
RPAIN-217ENST00000575711 TOPAZ1Q8N9V7 1692 aa19.49■□□□□ 0.71
RPAIN-217ENST00000575711 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
RPAIN-217ENST00000575711 AHDC1Q5TGY3 1603 aaPredicted RBP19.49■□□□□ 0.71
RPAIN-217ENST00000575711 PLEKHG3A1L390 1219 aa19.48■□□□□ 0.71
RPAIN-217ENST00000575711 DDX17Q92841 729 aaKnown RBP19.48■□□□□ 0.71
RPAIN-217ENST00000575711 CABP1Q9NZU7 370 aa19.48■□□□□ 0.71
RPAIN-217ENST00000575711 HSPA1LP34931 641 aa19.47■□□□□ 0.71
RPAIN-217ENST00000575711 TMC1Q8TDI8 760 aa19.47■□□□□ 0.71
RPAIN-217ENST00000575711 NHSL1Q5SYE7 1610 aa19.47■□□□□ 0.71
RPAIN-217ENST00000575711 PSME1Q06323 249 aa19.46■□□□□ 0.71
RPAIN-217ENST00000575711 POLR3AO14802 1390 aaPredicted RBP19.45■□□□□ 0.7
RPAIN-217ENST00000575711 NINLQ9Y2I6 1382 aa19.45■□□□□ 0.7
RPAIN-217ENST00000575711 POLR3GLQ9BT43 218 aa19.45■□□□□ 0.7
RPAIN-217ENST00000575711 ACEP12821 1306 aa19.45■□□□□ 0.7
RPAIN-217ENST00000575711 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
RPAIN-217ENST00000575711 PHLPP1O60346 1717 aa19.44■□□□□ 0.7
RPAIN-217ENST00000575711 SOS2Q07890 1332 aaPredicted RBP19.44■□□□□ 0.7
RPAIN-217ENST00000575711 XPCQ01831 940 aaPredicted RBP19.43■□□□□ 0.7
RPAIN-217ENST00000575711 KRT28Q7Z3Y7 464 aa19.43■□□□□ 0.7
RPAIN-217ENST00000575711 SLC12A5Q9H2X9 1139 aa19.42■□□□□ 0.7
RPAIN-217ENST00000575711 PXDNQ92626 1479 aa19.41■□□□□ 0.7
RPAIN-217ENST00000575711 COL16A1Q07092 1604 aaPredicted RBP19.41■□□□□ 0.7
RPAIN-217ENST00000575711 C11orf95C9JLR9 678 aaPredicted RBP19.41■□□□□ 0.7
RPAIN-217ENST00000575711 LRRC59Q96AG4 307 aaKnown RBP19.41■□□□□ 0.7
RPAIN-217ENST00000575711 HDGFL2Q7Z4V5 671 aaPredicted RBP19.4■□□□□ 0.7
RPAIN-217ENST00000575711 ZNF692Q9BU19 519 aaPredicted RBP19.4■□□□□ 0.7
RPAIN-217ENST00000575711 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
RPAIN-217ENST00000575711 MSH5O43196 834 aa19.39■□□□□ 0.69
RPAIN-217ENST00000575711 KIF7Q2M1P5 1343 aa19.39■□□□□ 0.69
RPAIN-217ENST00000575711 SBNO1A3KN83 1393 aa19.38■□□□□ 0.69
RPAIN-217ENST00000575711 CPSF1Q10570 1443 aaKnown RBP19.38■□□□□ 0.69
RPAIN-217ENST00000575711 USP6P35125 1406 aa19.37■□□□□ 0.69
RPAIN-217ENST00000575711 KTN1Q86UP2 1357 aaKnown RBP19.37■□□□□ 0.69
RPAIN-217ENST00000575711 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
RPAIN-217ENST00000575711 A0A1W2PP64 1363 aa19.36■□□□□ 0.69
RPAIN-217ENST00000575711 BRD4O60885 1362 aaPredicted RBP19.36■□□□□ 0.69
RPAIN-217ENST00000575711 ANKRD36BQ8N2N9 1353 aa19.36■□□□□ 0.69
RPAIN-217ENST00000575711 PAK3O75914 559 aaPredicted RBP19.36■□□□□ 0.69
RPAIN-217ENST00000575711 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
RPAIN-217ENST00000575711 CCDC7Q96M83 1385 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms