RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 SRPK2P78362 688 aaKnown RBP13.93□□□□□ -0.18
CALCOCO2-226ENST00000575461 VAC14Q08AM6 782 aa13.93□□□□□ -0.18
CALCOCO2-226ENST00000575461 ALG2Q9H553 416 aa13.93□□□□□ -0.18
CALCOCO2-226ENST00000575461 HDGFP51858 240 aaKnown RBP13.92□□□□□ -0.18
CALCOCO2-226ENST00000575461 GUCA2AQ02747 115 aa13.92□□□□□ -0.18
CALCOCO2-226ENST00000575461 SWT1Q5T5J6 900 aaKnown RBP13.92□□□□□ -0.18
CALCOCO2-226ENST00000575461 KCNK17Q96T54 332 aa13.92□□□□□ -0.18
CALCOCO2-226ENST00000575461 TSC1Q92574 1164 aa13.91□□□□□ -0.18
CALCOCO2-226ENST00000575461 LRRN4Q8WUT4 740 aa13.9□□□□□ -0.18
CALCOCO2-226ENST00000575461 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
CALCOCO2-226ENST00000575461 PALM3A6NDB9 673 aaPredicted RBP13.89□□□□□ -0.19
CALCOCO2-226ENST00000575461 HLA-CQ95604 372 aa13.89□□□□□ -0.19
CALCOCO2-226ENST00000575461 CFAP99D6REC4 459 aa13.88□□□□□ -0.19
CALCOCO2-226ENST00000575461 C6orf229H3BNL8 230 aa13.88□□□□□ -0.19
CALCOCO2-226ENST00000575461 SNPHO15079 494 aa13.88□□□□□ -0.19
CALCOCO2-226ENST00000575461 HOXB1P14653 301 aaPredicted RBP13.88□□□□□ -0.19
CALCOCO2-226ENST00000575461 MAMSTRQ6ZN01 415 aa13.88□□□□□ -0.19
CALCOCO2-226ENST00000575461 ZBED2Q9BTP6 218 aa13.88□□□□□ -0.19
CALCOCO2-226ENST00000575461 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
CALCOCO2-226ENST00000575461 PNMA1Q8ND90 353 aa13.87□□□□□ -0.19
CALCOCO2-226ENST00000575461 MTMR7Q9Y216 660 aa13.87□□□□□ -0.19
CALCOCO2-226ENST00000575461 RABGEF1Q9UJ41 708 aa13.86□□□□□ -0.19
CALCOCO2-226ENST00000575461 LMOD1P29536 600 aaPredicted RBP13.85□□□□□ -0.19
CALCOCO2-226ENST00000575461 SLF2Q8IX21 1173 aa13.85□□□□□ -0.19
CALCOCO2-226ENST00000575461 SEMA3FQ13275 785 aa13.84□□□□□ -0.19
CALCOCO2-226ENST00000575461 TFIP11Q9UBB9 837 aaKnown RBP13.83□□□□□ -0.2
CALCOCO2-226ENST00000575461 ATG7O95352 703 aa13.82□□□□□ -0.2
CALCOCO2-226ENST00000575461 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
CALCOCO2-226ENST00000575461 FUT2Q10981 343 aa13.82□□□□□ -0.2
CALCOCO2-226ENST00000575461 PRR7Q8TB68 274 aa13.81□□□□□ -0.2
CALCOCO2-226ENST00000575461 UCN2Q96RP3 112 aa13.81□□□□□ -0.2
CALCOCO2-226ENST00000575461 SLC4A5Q9BY07 1137 aa13.81□□□□□ -0.2
CALCOCO2-226ENST00000575461 FAM98CQ17RN3 349 aaKnown RBP13.8□□□□□ -0.2
CALCOCO2-226ENST00000575461 EPS8L1Q8TE68 723 aa13.8□□□□□ -0.2
CALCOCO2-226ENST00000575461 CFHP08603 1231 aa13.79□□□□□ -0.2
CALCOCO2-226ENST00000575461 EIF4G2P78344 907 aaKnown RBP eCLIP13.79□□□□□ -0.2
CALCOCO2-226ENST00000575461 SP7Q8TDD2 431 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO2-226ENST00000575461 NR6A1Q15406 480 aa13.78□□□□□ -0.2
CALCOCO2-226ENST00000575461 SEPT9Q9UHD8 586 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO2-226ENST00000575461 VRTNQ9H8Y1 702 aa13.77□□□□□ -0.21
CALCOCO2-226ENST00000575461 MAFBQ9Y5Q3 323 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO2-226ENST00000575461 DESI1Q6ICB0 168 aa13.76□□□□□ -0.21
CALCOCO2-226ENST00000575461 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
CALCOCO2-226ENST00000575461 KMT5BQ4FZB7 885 aa13.75□□□□□ -0.21
CALCOCO2-226ENST00000575461 POTEB2H3BUK9 544 aa13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 ARHGAP33O14559 1287 aa13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 ATP9BO43861 1147 aa13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 PSEN2P49810 448 aa13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 Q3C1V9 767 aa13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 LAPTM4BQ86VI4 370 aa13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 SYMPKQ92797 1274 aaKnown RBP13.73□□□□□ -0.21
CALCOCO2-226ENST00000575461 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO2-226ENST00000575461 SAMD7Q7Z3H4 446 aa13.72□□□□□ -0.21
CALCOCO2-226ENST00000575461 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO2-226ENST00000575461 TMEM88BA6NKF7 163 aa13.71□□□□□ -0.21
CALCOCO2-226ENST00000575461 PER1O15534 1290 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO2-226ENST00000575461 NR1H3Q13133 447 aa13.71□□□□□ -0.21
CALCOCO2-226ENST00000575461 POTEHQ6S545 545 aa13.71□□□□□ -0.21
CALCOCO2-226ENST00000575461 TBC1D9Q6ZT07 1266 aa13.71□□□□□ -0.21
CALCOCO2-226ENST00000575461 IVNS1ABPQ9Y6Y0 642 aa13.71□□□□□ -0.21
CALCOCO2-226ENST00000575461 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
CALCOCO2-226ENST00000575461 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
CALCOCO2-226ENST00000575461 ELOAQ14241 798 aaKnown RBP13.68□□□□□ -0.22
CALCOCO2-226ENST00000575461 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
CALCOCO2-226ENST00000575461 MORN1Q5T089 497 aa13.68□□□□□ -0.22
CALCOCO2-226ENST00000575461 LYPD8Q6UX82 237 aa13.68□□□□□ -0.22
CALCOCO2-226ENST00000575461 SND1Q7KZF4 910 aaKnown RBP eCLIP13.68□□□□□ -0.22
CALCOCO2-226ENST00000575461 RBM25P49756 843 aaKnown RBP13.67□□□□□ -0.22
CALCOCO2-226ENST00000575461 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
CALCOCO2-226ENST00000575461 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
CALCOCO2-226ENST00000575461 RNF40O75150 1001 aa13.65□□□□□ -0.22
CALCOCO2-226ENST00000575461 ACTN4O43707 911 aaKnown RBP13.64□□□□□ -0.23
CALCOCO2-226ENST00000575461 PBX2P40425 430 aa13.64□□□□□ -0.23
CALCOCO2-226ENST00000575461 GNEQ9Y223 722 aaKnown RBP13.64□□□□□ -0.23
CALCOCO2-226ENST00000575461 VPS9D1Q9Y2B5 631 aa13.64□□□□□ -0.23
CALCOCO2-226ENST00000575461 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
CALCOCO2-226ENST00000575461 ZC3H4Q9UPT8 1303 aaKnown RBP13.64□□□□□ -0.23
CALCOCO2-226ENST00000575461 ZBBXA8MT70 800 aa13.63□□□□□ -0.23
CALCOCO2-226ENST00000575461 KANK4Q5T7N3 995 aaPredicted RBP13.63□□□□□ -0.23
CALCOCO2-226ENST00000575461 PRR14Q9BWN1 585 aa13.63□□□□□ -0.23
CALCOCO2-226ENST00000575461 SLC27A5Q9Y2P5 690 aa13.63□□□□□ -0.23
CALCOCO2-226ENST00000575461 DMRTA1Q5VZB9 504 aa13.62□□□□□ -0.23
CALCOCO2-226ENST00000575461 FBXO45P0C2W1 286 aa13.61□□□□□ -0.23
CALCOCO2-226ENST00000575461 FKBPLQ9UIM3 349 aa13.61□□□□□ -0.23
CALCOCO2-226ENST00000575461 E9PSI1 815 aa13.59□□□□□ -0.23
CALCOCO2-226ENST00000575461 PLEKHM2Q8IWE5 1019 aa13.59□□□□□ -0.23
CALCOCO2-226ENST00000575461 ZNF592Q92610 1267 aa13.59□□□□□ -0.23
CALCOCO2-226ENST00000575461 SALL2Q9Y467 1007 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO2-226ENST00000575461 ERBB3P21860 1342 aa13.59□□□□□ -0.23
CALCOCO2-226ENST00000575461 PUS10Q3MIT2 529 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-226ENST00000575461 POTEEQ6S8J3 1075 aa13.58□□□□□ -0.24
CALCOCO2-226ENST00000575461 ZFRQ96KR1 1074 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-226ENST00000575461 USB1Q9BQ65 265 aaKnown RBP13.58□□□□□ -0.24
CALCOCO2-226ENST00000575461 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
CALCOCO2-226ENST00000575461 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
CALCOCO2-226ENST00000575461 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
CALCOCO2-226ENST00000575461 VARS2Q5ST30 1063 aaKnown RBP13.56□□□□□ -0.24
CALCOCO2-226ENST00000575461 USP17L2Q6R6M4 530 aa13.56□□□□□ -0.24
CALCOCO2-226ENST00000575461 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms