RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 TLL1O43897 1013 aa8.63□□□□□ -1.03
TSR1-203ENST00000575049 GJA5P36382 358 aa8.63□□□□□ -1.03
TSR1-203ENST00000575049 RIC3Q7Z5B4 369 aa8.63□□□□□ -1.03
TSR1-203ENST00000575049 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
TSR1-203ENST00000575049 CLK2P49760 499 aaKnown RBP8.62□□□□□ -1.03
TSR1-203ENST00000575049 Q3C1V9 767 aa8.62□□□□□ -1.03
TSR1-203ENST00000575049 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
TSR1-203ENST00000575049 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
TSR1-203ENST00000575049 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
TSR1-203ENST00000575049 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
TSR1-203ENST00000575049 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
TSR1-203ENST00000575049 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
TSR1-203ENST00000575049 FMNL1O95466 1100 aaPredicted RBP8.61□□□□□ -1.03
TSR1-203ENST00000575049 HRCP23327 699 aa8.61□□□□□ -1.03
TSR1-203ENST00000575049 SKIV2LQ15477 1246 aaKnown RBP8.61□□□□□ -1.03
TSR1-203ENST00000575049 BRICD5Q6PL45 260 aa8.61□□□□□ -1.03
TSR1-203ENST00000575049 NKX2-3Q8TAU0 364 aa8.61□□□□□ -1.03
TSR1-203ENST00000575049 ADH1BP00325 375 aa8.6□□□□□ -1.03
TSR1-203ENST00000575049 SPSB2Q99619 263 aa8.6□□□□□ -1.03
TSR1-203ENST00000575049 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
TSR1-203ENST00000575049 CSPP1Q1MSJ5 1256 aa8.59□□□□□ -1.03
TSR1-203ENST00000575049 TUSC1Q2TAM9 212 aa8.59□□□□□ -1.03
TSR1-203ENST00000575049 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
TSR1-203ENST00000575049 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
TSR1-203ENST00000575049 C6orf229H3BNL8 230 aa8.57□□□□□ -1.04
TSR1-203ENST00000575049 PROCA1Q8NCQ7 364 aaPredicted RBP8.57□□□□□ -1.04
TSR1-203ENST00000575049 MTMR2Q13614 643 aa8.56□□□□□ -1.04
TSR1-203ENST00000575049 PRPF38BQ5VTL8 546 aaKnown RBP8.56□□□□□ -1.04
TSR1-203ENST00000575049 RETREG3Q86VR2 466 aa8.56□□□□□ -1.04
TSR1-203ENST00000575049 CABLES1Q8TDN4 633 aa8.56□□□□□ -1.04
TSR1-203ENST00000575049 PCMTD1Q96MG8 357 aaPredicted RBP8.56□□□□□ -1.04
TSR1-203ENST00000575049 USB1Q9BQ65 265 aaKnown RBP8.56□□□□□ -1.04
TSR1-203ENST00000575049 ZBTB3Q9H5J0 574 aa8.56□□□□□ -1.04
TSR1-203ENST00000575049 LILRB3O75022 631 aa8.55□□□□□ -1.04
TSR1-203ENST00000575049 QPCTQ16769 361 aa8.55□□□□□ -1.04
TSR1-203ENST00000575049 MSS51Q4VC12 460 aa8.55□□□□□ -1.04
TSR1-203ENST00000575049 FAM160A2Q8N612 972 aaPredicted RBP8.55□□□□□ -1.04
TSR1-203ENST00000575049 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.55□□□□□ -1.04
TSR1-203ENST00000575049 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
TSR1-203ENST00000575049 ATP1B4Q9UN42 357 aaPredicted RBP8.55□□□□□ -1.04
TSR1-203ENST00000575049 SPDYE5A6NIY4 337 aa8.54□□□□□ -1.04
TSR1-203ENST00000575049 S1PR4O95977 384 aa8.54□□□□□ -1.04
TSR1-203ENST00000575049 A0A0G2JS52 829 aa8.53□□□□□ -1.04
TSR1-203ENST00000575049 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
TSR1-203ENST00000575049 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
TSR1-203ENST00000575049 NUTM2DQ5VT03 806 aaPredicted RBP8.53□□□□□ -1.04
TSR1-203ENST00000575049 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
TSR1-203ENST00000575049 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
TSR1-203ENST00000575049 GGCXP38435 758 aa8.52□□□□□ -1.05
TSR1-203ENST00000575049 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
TSR1-203ENST00000575049 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
TSR1-203ENST00000575049 RTL5Q5HYW3 569 aaPredicted RBP8.51□□□□□ -1.05
TSR1-203ENST00000575049 FBXO31Q5XUX0 539 aaPredicted RBP8.51□□□□□ -1.05
TSR1-203ENST00000575049 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
TSR1-203ENST00000575049 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
TSR1-203ENST00000575049 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
TSR1-203ENST00000575049 MMP16P51512 607 aa8.5□□□□□ -1.05
TSR1-203ENST00000575049 PPP2R2DQ66LE6 453 aa8.5□□□□□ -1.05
TSR1-203ENST00000575049 RNF223E7ERA6 249 aa8.49□□□□□ -1.05
TSR1-203ENST00000575049 JUNDP17535 347 aa8.49□□□□□ -1.05
TSR1-203ENST00000575049 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
TSR1-203ENST00000575049 ZMYND15Q9H091 742 aa8.48□□□□□ -1.05
TSR1-203ENST00000575049 DESI1Q6ICB0 168 aa8.47□□□□□ -1.05
TSR1-203ENST00000575049 RFC5P40937 340 aa8.46□□□□□ -1.06
TSR1-203ENST00000575049 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
TSR1-203ENST00000575049 TSC1Q92574 1164 aa8.46□□□□□ -1.06
TSR1-203ENST00000575049 FCF1Q9Y324 198 aaKnown RBP8.46□□□□□ -1.06
TSR1-203ENST00000575049 HELBQ8NG08 1087 aaPredicted RBP8.45□□□□□ -1.06
TSR1-203ENST00000575049 PTPRNQ16849 979 aa8.44□□□□□ -1.06
TSR1-203ENST00000575049 LYPD8Q6UX82 237 aa8.43□□□□□ -1.06
TSR1-203ENST00000575049 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
TSR1-203ENST00000575049 PER1O15534 1290 aaPredicted RBP8.42□□□□□ -1.06
TSR1-203ENST00000575049 AP1G2O75843 785 aa8.42□□□□□ -1.06
TSR1-203ENST00000575049 CCNYL3P0C7X3 344 aa8.42□□□□□ -1.06
TSR1-203ENST00000575049 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
TSR1-203ENST00000575049 TMEM259Q4ZIN3 620 aa8.41□□□□□ -1.06
TSR1-203ENST00000575049 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
TSR1-203ENST00000575049 CCDC24Q8N4L8 307 aa8.41□□□□□ -1.06
TSR1-203ENST00000575049 USP17L8P0C7I0 530 aa8.39□□□□□ -1.07
TSR1-203ENST00000575049 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
TSR1-203ENST00000575049 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
TSR1-203ENST00000575049 RGS20O76081 388 aa8.38□□□□□ -1.07
TSR1-203ENST00000575049 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
TSR1-203ENST00000575049 LRRN4Q8WUT4 740 aa8.38□□□□□ -1.07
TSR1-203ENST00000575049 CTHP32929 405 aa8.37□□□□□ -1.07
TSR1-203ENST00000575049 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
TSR1-203ENST00000575049 PTCRAQ6ISU1 281 aaPredicted RBP8.37□□□□□ -1.07
TSR1-203ENST00000575049 LIAT1Q6ZQX7 453 aa8.37□□□□□ -1.07
TSR1-203ENST00000575049 PRKD2Q9BZL6 878 aa8.37□□□□□ -1.07
TSR1-203ENST00000575049 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
TSR1-203ENST00000575049 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
TSR1-203ENST00000575049 SLC19A1P41440 591 aa8.36□□□□□ -1.07
TSR1-203ENST00000575049 BANK1Q8NDB2 785 aa8.36□□□□□ -1.07
TSR1-203ENST00000575049 ARID3AQ99856 593 aa8.36□□□□□ -1.07
TSR1-203ENST00000575049 V9GY48 417 aaPredicted RBP8.36□□□□□ -1.07
TSR1-203ENST00000575049 RPIAP49247 311 aa8.35□□□□□ -1.07
TSR1-203ENST00000575049 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
TSR1-203ENST00000575049 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
TSR1-203ENST00000575049 HMX1Q9NP08 348 aaPredicted RBP8.34□□□□□ -1.07
TSR1-203ENST00000575049 TRIM32Q13049 653 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms