RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 DISP3Q9P2K9 1392 aa22.07■■□□□ 1.12
SMPD3-212ENST00000574662 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
SMPD3-212ENST00000574662 KIF7Q2M1P5 1343 aa22.06■■□□□ 1.12
SMPD3-212ENST00000574662 SBNO2Q9Y2G9 1366 aa22.05■■□□□ 1.12
SMPD3-212ENST00000574662 TMF1P82094 1093 aa22.05■■□□□ 1.12
SMPD3-212ENST00000574662 RBM33Q96EV2 1170 aaKnown RBP22.05■■□□□ 1.12
SMPD3-212ENST00000574662 QRICH2Q9H0J4 1663 aa22.05■■□□□ 1.12
SMPD3-212ENST00000574662 PTCH1Q13635 1447 aa22.05■■□□□ 1.12
SMPD3-212ENST00000574662 CCDC7Q96M83 1385 aa22.03■■□□□ 1.12
SMPD3-212ENST00000574662 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
SMPD3-212ENST00000574662 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.11
SMPD3-212ENST00000574662 ZNF335Q9H4Z2 1342 aaPredicted RBP22.01■■□□□ 1.11
SMPD3-212ENST00000574662 STRCP1A6NGW2 1772 aa22.01■■□□□ 1.11
SMPD3-212ENST00000574662 SLC24A1O60721 1099 aa22■■□□□ 1.11
SMPD3-212ENST00000574662 PROSER2Q86WR7 435 aaPredicted RBP22■■□□□ 1.11
SMPD3-212ENST00000574662 SIPA1L2Q9P2F8 1722 aaPredicted RBP22■■□□□ 1.11
SMPD3-212ENST00000574662 EVC2Q86UK5 1308 aa21.98■■□□□ 1.11
SMPD3-212ENST00000574662 TULP4Q9NRJ4 1543 aa21.98■■□□□ 1.11
SMPD3-212ENST00000574662 MYT1Q01538 1121 aa21.97■■□□□ 1.11
SMPD3-212ENST00000574662 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
SMPD3-212ENST00000574662 DDX10Q13206 875 aaKnown RBP21.97■■□□□ 1.11
SMPD3-212ENST00000574662 CABP2Q9NPB3 220 aa21.97■■□□□ 1.11
SMPD3-212ENST00000574662 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
SMPD3-212ENST00000574662 WASLO00401 505 aaPredicted RBP21.95■■□□□ 1.1
SMPD3-212ENST00000574662 NKTRP30414 1462 aaKnown RBP21.95■■□□□ 1.1
SMPD3-212ENST00000574662 ILDR1Q86SU0 546 aaPredicted RBP21.94■■□□□ 1.1
SMPD3-212ENST00000574662 CDCA8Q53HL2 280 aa21.94■■□□□ 1.1
SMPD3-212ENST00000574662 SRPK2P78362 688 aaKnown RBP21.93■■□□□ 1.1
SMPD3-212ENST00000574662 TMEM94Q12767 1356 aa21.92■■□□□ 1.1
SMPD3-212ENST00000574662 CERKQ8TCT0 537 aa21.92■■□□□ 1.1
SMPD3-212ENST00000574662 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
SMPD3-212ENST00000574662 CCER2I3L3R5 266 aa21.9■■□□□ 1.1
SMPD3-212ENST00000574662 ADGRB2O60241 1585 aa21.89■■□□□ 1.09
SMPD3-212ENST00000574662 C14orf37Q86TY3 774 aa21.89■■□□□ 1.09
SMPD3-212ENST00000574662 FBXO41Q8TF61 875 aa21.89■■□□□ 1.09
SMPD3-212ENST00000574662 LRRC7Q96NW7 1537 aa21.88■■□□□ 1.09
SMPD3-212ENST00000574662 NUTM2FA1L443 756 aa21.88■■□□□ 1.09
SMPD3-212ENST00000574662 ADGRL3Q9HAR2 1447 aa21.88■■□□□ 1.09
SMPD3-212ENST00000574662 SLC12A5Q9H2X9 1139 aa21.87■■□□□ 1.09
SMPD3-212ENST00000574662 PRR36Q9H6K5 1346 aa21.87■■□□□ 1.09
SMPD3-212ENST00000574662 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
SMPD3-212ENST00000574662 NUDT16Q96DE0 195 aaKnown RBP21.87■■□□□ 1.09
SMPD3-212ENST00000574662 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
SMPD3-212ENST00000574662 NCOA3Q9Y6Q9 1424 aa21.85■■□□□ 1.09
SMPD3-212ENST00000574662 TMC1Q8TDI8 760 aa21.84■■□□□ 1.09
SMPD3-212ENST00000574662 ANP32CO43423 234 aa21.84■■□□□ 1.09
SMPD3-212ENST00000574662 ATAD2Q6PL18 1390 aa21.83■■□□□ 1.08
SMPD3-212ENST00000574662 PANK3Q9H999 370 aa21.82■■□□□ 1.08
SMPD3-212ENST00000574662 CABP1Q9NZU7 370 aa21.82■■□□□ 1.08
SMPD3-212ENST00000574662 XIRP1Q702N8 1843 aaKnown RBP21.82■■□□□ 1.08
SMPD3-212ENST00000574662 LTBP4Q8N2S1 1624 aa21.82■■□□□ 1.08
SMPD3-212ENST00000574662 CCDC61Q9Y6R9 512 aa21.81■■□□□ 1.08
SMPD3-212ENST00000574662 MYOM1P52179 1685 aa21.81■■□□□ 1.08
SMPD3-212ENST00000574662 ATP7BP35670 1465 aa21.8■■□□□ 1.08
SMPD3-212ENST00000574662 CDC42BPGQ6DT37 1551 aa21.8■■□□□ 1.08
SMPD3-212ENST00000574662 USP32Q8NFA0 1604 aa21.78■■□□□ 1.08
SMPD3-212ENST00000574662 FMN2Q9NZ56 1722 aa21.77■■□□□ 1.08
SMPD3-212ENST00000574662 MSH6P52701 1360 aa21.77■■□□□ 1.08
SMPD3-212ENST00000574662 PER1O15534 1290 aaPredicted RBP21.76■■□□□ 1.07
SMPD3-212ENST00000574662 ATF3P18847 181 aa21.76■■□□□ 1.07
SMPD3-212ENST00000574662 CARD14Q9BXL6 1004 aa21.76■■□□□ 1.07
SMPD3-212ENST00000574662 PPIP5K1Q6PFW1 1433 aa21.76■■□□□ 1.07
SMPD3-212ENST00000574662 ANKARQ7Z5J8 1434 aa21.75■■□□□ 1.07
SMPD3-212ENST00000574662 PLEKHG3A1L390 1219 aa21.74■■□□□ 1.07
SMPD3-212ENST00000574662 CD163L1Q9NR16 1453 aa21.74■■□□□ 1.07
SMPD3-212ENST00000574662 RGPD8O14715 1765 aaPredicted RBP21.74■■□□□ 1.07
SMPD3-212ENST00000574662 CADPS2Q86UW7 1296 aa21.74■■□□□ 1.07
SMPD3-212ENST00000574662 PMFBP1Q8TBY8 1022 aa21.74■■□□□ 1.07
SMPD3-212ENST00000574662 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
SMPD3-212ENST00000574662 DCCP43146 1447 aa21.73■■□□□ 1.07
SMPD3-212ENST00000574662 ORAI2Q96SN7 254 aa21.72■■□□□ 1.07
SMPD3-212ENST00000574662 ANKRD36BQ8N2N9 1353 aa21.71■■□□□ 1.07
SMPD3-212ENST00000574662 MST1RQ04912 1400 aa21.71■■□□□ 1.07
SMPD3-212ENST00000574662 ESCO1Q5FWF5 840 aa21.71■■□□□ 1.07
SMPD3-212ENST00000574662 TERF2IPQ9NYB0 399 aa21.71■■□□□ 1.07
SMPD3-212ENST00000574662 A0A1W2PP64 1363 aa21.71■■□□□ 1.07
SMPD3-212ENST00000574662 C1orf167Q5SNV9 1468 aa21.71■■□□□ 1.07
SMPD3-212ENST00000574662 ACEP12821 1306 aa21.7■■□□□ 1.06
SMPD3-212ENST00000574662 TOPAZ1Q8N9V7 1692 aa21.7■■□□□ 1.06
SMPD3-212ENST00000574662 CPSF1Q10570 1443 aaKnown RBP21.69■■□□□ 1.06
SMPD3-212ENST00000574662 HDGFL2Q7Z4V5 671 aaPredicted RBP21.69■■□□□ 1.06
SMPD3-212ENST00000574662 PHF8Q9UPP1 1060 aa21.69■■□□□ 1.06
SMPD3-212ENST00000574662 IQSEC2Q5JU85 1478 aa21.68■■□□□ 1.06
SMPD3-212ENST00000574662 SLAIN2Q9P270 581 aa21.67■■□□□ 1.06
SMPD3-212ENST00000574662 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
SMPD3-212ENST00000574662 KNSTRNQ9Y448 316 aa21.66■■□□□ 1.06
SMPD3-212ENST00000574662 NGDNQ8NEJ9 315 aaKnown RBP21.66■■□□□ 1.06
SMPD3-212ENST00000574662 NSD3Q9BZ95 1437 aa21.65■■□□□ 1.06
SMPD3-212ENST00000574662 ZNF692Q9BU19 519 aaPredicted RBP21.65■■□□□ 1.06
SMPD3-212ENST00000574662 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
SMPD3-212ENST00000574662 KTN1Q86UP2 1357 aaKnown RBP21.65■■□□□ 1.06
SMPD3-212ENST00000574662 AMER1Q5JTC6 1135 aaPredicted RBP21.64■■□□□ 1.06
SMPD3-212ENST00000574662 ITSN1Q15811 1721 aa21.64■■□□□ 1.05
SMPD3-212ENST00000574662 NEFLP07196 543 aa21.63■■□□□ 1.05
SMPD3-212ENST00000574662 FOXO3O43524 673 aa21.61■■□□□ 1.05
SMPD3-212ENST00000574662 CC2D1BQ5T0F9 858 aaKnown RBP21.61■■□□□ 1.05
SMPD3-212ENST00000574662 BRINP3Q76B58 766 aa21.61■■□□□ 1.05
SMPD3-212ENST00000574662 UBAP1LF5GYI3 381 aa21.6■■□□□ 1.05
SMPD3-212ENST00000574662 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.6■■□□□ 1.05
SMPD3-212ENST00000574662 AKAP12Q02952 1782 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms