RNA–Protein interactions for RNA: ENST00000573872.5

TRAP1-208, Transcript of TNF receptor associated protein 1, humanhuman

TSL 3

Gene TRAP1, Length 656 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-208ENST00000573872 ROCK2O75116 1388 aaKnown RBP18.82■□□□□ 0.6
TRAP1-208ENST00000573872 C14orf37Q86TY3 774 aa18.82■□□□□ 0.6
TRAP1-208ENST00000573872 CADPS2Q86UW7 1296 aa18.81■□□□□ 0.6
TRAP1-208ENST00000573872 CDC42BPGQ6DT37 1551 aa18.81■□□□□ 0.6
TRAP1-208ENST00000573872 ADGRB2O60241 1585 aa18.78■□□□□ 0.6
TRAP1-208ENST00000573872 MST1RQ04912 1400 aa18.78■□□□□ 0.6
TRAP1-208ENST00000573872 ATF3P18847 181 aa18.78■□□□□ 0.6
TRAP1-208ENST00000573872 POGKQ9P215 609 aa18.77■□□□□ 0.6
TRAP1-208ENST00000573872 SLAIN2Q9P270 581 aa18.76■□□□□ 0.59
TRAP1-208ENST00000573872 SAFB2Q14151 953 aaKnown RBP eCLIP18.75■□□□□ 0.59
TRAP1-208ENST00000573872 ILDR1Q86SU0 546 aaPredicted RBP18.75■□□□□ 0.59
TRAP1-208ENST00000573872 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
TRAP1-208ENST00000573872 CARD11Q9BXL7 1154 aa18.74■□□□□ 0.59
TRAP1-208ENST00000573872 FMN2Q9NZ56 1722 aa18.74■□□□□ 0.59
TRAP1-208ENST00000573872 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
TRAP1-208ENST00000573872 C1orf167Q5SNV9 1468 aa18.73■□□□□ 0.59
TRAP1-208ENST00000573872 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
TRAP1-208ENST00000573872 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
TRAP1-208ENST00000573872 MINK1Q8N4C8 1332 aaPredicted RBP18.71■□□□□ 0.59
TRAP1-208ENST00000573872 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
TRAP1-208ENST00000573872 BRINP3Q76B58 766 aa18.69■□□□□ 0.58
TRAP1-208ENST00000573872 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
TRAP1-208ENST00000573872 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
TRAP1-208ENST00000573872 WASLO00401 505 aaPredicted RBP18.68■□□□□ 0.58
TRAP1-208ENST00000573872 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
TRAP1-208ENST00000573872 USP32Q8NFA0 1604 aa18.67■□□□□ 0.58
TRAP1-208ENST00000573872 ANKARQ7Z5J8 1434 aa18.66■□□□□ 0.58
TRAP1-208ENST00000573872 TULP4Q9NRJ4 1543 aa18.66■□□□□ 0.58
TRAP1-208ENST00000573872 AHDC1Q5TGY3 1603 aaPredicted RBP18.65■□□□□ 0.58
TRAP1-208ENST00000573872 ORAI2Q96SN7 254 aa18.65■□□□□ 0.58
TRAP1-208ENST00000573872 RGPD8O14715 1765 aaPredicted RBP18.64■□□□□ 0.57
TRAP1-208ENST00000573872 NUTM2FA1L443 756 aa18.64■□□□□ 0.57
TRAP1-208ENST00000573872 PRR36Q9H6K5 1346 aa18.64■□□□□ 0.57
TRAP1-208ENST00000573872 USP47Q96K76 1375 aa18.64■□□□□ 0.57
TRAP1-208ENST00000573872 NHSL1Q5SYE7 1610 aa18.63■□□□□ 0.57
TRAP1-208ENST00000573872 HSPA1LP34931 641 aa18.63■□□□□ 0.57
TRAP1-208ENST00000573872 ATP7BP35670 1465 aa18.63■□□□□ 0.57
TRAP1-208ENST00000573872 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
TRAP1-208ENST00000573872 ST20-MTHFSA0A0A6YYL1 179 aa18.61■□□□□ 0.57
TRAP1-208ENST00000573872 TESK2Q96S53 571 aa18.61■□□□□ 0.57
TRAP1-208ENST00000573872 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
TRAP1-208ENST00000573872 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
TRAP1-208ENST00000573872 COL16A1Q07092 1604 aaPredicted RBP18.6■□□□□ 0.57
TRAP1-208ENST00000573872 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
TRAP1-208ENST00000573872 TOPAZ1Q8N9V7 1692 aa18.59■□□□□ 0.57
TRAP1-208ENST00000573872 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.56
TRAP1-208ENST00000573872 EVC2Q86UK5 1308 aa18.57■□□□□ 0.56
TRAP1-208ENST00000573872 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
TRAP1-208ENST00000573872 DDX17Q92841 729 aaKnown RBP18.56■□□□□ 0.56
TRAP1-208ENST00000573872 CABP2Q9NPB3 220 aa18.56■□□□□ 0.56
TRAP1-208ENST00000573872 PHF8Q9UPP1 1060 aa18.56■□□□□ 0.56
TRAP1-208ENST00000573872 SOS2Q07890 1332 aaPredicted RBP18.55■□□□□ 0.56
TRAP1-208ENST00000573872 PXDNQ92626 1479 aa18.55■□□□□ 0.56
TRAP1-208ENST00000573872 NPHP3Q7Z494 1330 aa18.54■□□□□ 0.56
TRAP1-208ENST00000573872 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
TRAP1-208ENST00000573872 CCDC61Q9Y6R9 512 aa18.54■□□□□ 0.56
TRAP1-208ENST00000573872 FOXO3O43524 673 aa18.53■□□□□ 0.56
TRAP1-208ENST00000573872 PLEKHG3A1L390 1219 aa18.52■□□□□ 0.56
TRAP1-208ENST00000573872 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
TRAP1-208ENST00000573872 PMFBP1Q8TBY8 1022 aa18.52■□□□□ 0.56
TRAP1-208ENST00000573872 PUS7Q96PZ0 661 aaKnown RBP18.52■□□□□ 0.56
TRAP1-208ENST00000573872 EIF4G2P78344 907 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAP1-208ENST00000573872 POLR3AO14802 1390 aaPredicted RBP18.51■□□□□ 0.55
TRAP1-208ENST00000573872 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
TRAP1-208ENST00000573872 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
TRAP1-208ENST00000573872 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
TRAP1-208ENST00000573872 DISP3Q9P2K9 1392 aa18.5■□□□□ 0.55
TRAP1-208ENST00000573872 SHPRHQ149N8 1683 aa18.48■□□□□ 0.55
TRAP1-208ENST00000573872 JCADQ9P266 1359 aa18.48■□□□□ 0.55
TRAP1-208ENST00000573872 LRRC59Q96AG4 307 aaKnown RBP18.48■□□□□ 0.55
TRAP1-208ENST00000573872 TRPM3Q9HCF6 1732 aaPredicted RBP18.47■□□□□ 0.55
TRAP1-208ENST00000573872 TMF1P82094 1093 aa18.47■□□□□ 0.55
TRAP1-208ENST00000573872 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
TRAP1-208ENST00000573872 KRT28Q7Z3Y7 464 aa18.47■□□□□ 0.55
TRAP1-208ENST00000573872 CABP1Q9NZU7 370 aa18.47■□□□□ 0.55
TRAP1-208ENST00000573872 ACEP12821 1306 aa18.47■□□□□ 0.55
TRAP1-208ENST00000573872 SBNO1A3KN83 1393 aa18.45■□□□□ 0.54
TRAP1-208ENST00000573872 PNPLA6Q8IY17 1366 aa18.45■□□□□ 0.54
TRAP1-208ENST00000573872 NGDNQ8NEJ9 315 aaKnown RBP18.45■□□□□ 0.54
TRAP1-208ENST00000573872 PSME1Q06323 249 aa18.44■□□□□ 0.54
TRAP1-208ENST00000573872 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
TRAP1-208ENST00000573872 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
TRAP1-208ENST00000573872 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
TRAP1-208ENST00000573872 CD163L1Q9NR16 1453 aa18.43■□□□□ 0.54
TRAP1-208ENST00000573872 AKAP12Q02952 1782 aa18.42■□□□□ 0.54
TRAP1-208ENST00000573872 COL22A1Q8NFW1 1626 aaPredicted RBP18.42■□□□□ 0.54
TRAP1-208ENST00000573872 ALS2Q96Q42 1657 aa18.42■□□□□ 0.54
TRAP1-208ENST00000573872 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
TRAP1-208ENST00000573872 USP6P35125 1406 aa18.4■□□□□ 0.54
TRAP1-208ENST00000573872 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
TRAP1-208ENST00000573872 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
TRAP1-208ENST00000573872 SLC12A5Q9H2X9 1139 aa18.4■□□□□ 0.54
TRAP1-208ENST00000573872 SPATA31A6Q5VVP1 1343 aa18.4■□□□□ 0.54
TRAP1-208ENST00000573872 BRD4O60885 1362 aaPredicted RBP18.4■□□□□ 0.54
TRAP1-208ENST00000573872 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
TRAP1-208ENST00000573872 MYOM1P52179 1685 aa18.38■□□□□ 0.53
TRAP1-208ENST00000573872 MON2Q7Z3U7 1717 aa18.38■□□□□ 0.53
TRAP1-208ENST00000573872 ZEB1P37275 1124 aaPredicted RBP18.38■□□□□ 0.53
TRAP1-208ENST00000573872 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
TRAP1-208ENST00000573872 LRP6O75581 1613 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms