RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 PAK3O75914 559 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA9-201ENST00000573521 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
PCDHGA9-201ENST00000573521 DHX29Q7Z478 1369 aaKnown RBP15.01□□□□□ -0.01
PCDHGA9-201ENST00000573521 NAIPQ13075 1403 aa15□□□□□ -0.01
PCDHGA9-201ENST00000573521 IFIT2P09913 472 aaKnown RBP15□□□□□ -0.01
PCDHGA9-201ENST00000573521 NASPP49321 788 aaPredicted RBP15□□□□□ -0.01
PCDHGA9-201ENST00000573521 CAVIN1Q6NZI2 390 aaKnown RBP15□□□□□ -0.01
PCDHGA9-201ENST00000573521 ADAMTS8Q9UP79 889 aa15□□□□□ -0.01
PCDHGA9-201ENST00000573521 SOX12O15370 315 aa15□□□□□ -0.01
PCDHGA9-201ENST00000573521 TRAK2O60296 914 aa15□□□□□ -0.01
PCDHGA9-201ENST00000573521 IPO7O95373 1038 aaKnown RBP15□□□□□ -0.01
PCDHGA9-201ENST00000573521 CCDC141Q6ZP82 1450 aa15□□□□□ -0.01
PCDHGA9-201ENST00000573521 TRIM29Q14134 588 aa15□□□□□ -0.01
PCDHGA9-201ENST00000573521 AKAP17AQ02040 695 aaKnown RBP14.99□□□□□ -0.01
PCDHGA9-201ENST00000573521 SASS6Q6UVJ0 657 aa14.99□□□□□ -0.01
PCDHGA9-201ENST00000573521 NOC3LQ8WTT2 800 aaKnown RBP14.99□□□□□ -0.01
PCDHGA9-201ENST00000573521 CUL7Q14999 1698 aa14.99□□□□□ -0.01
PCDHGA9-201ENST00000573521 MLECQ14165 292 aa14.98□□□□□ -0.01
PCDHGA9-201ENST00000573521 CCDC73Q6ZRK6 1079 aa14.98□□□□□ -0.01
PCDHGA9-201ENST00000573521 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
PCDHGA9-201ENST00000573521 A0A0U1RQG5 324 aaPredicted RBP14.98□□□□□ -0.01
PCDHGA9-201ENST00000573521 ERBINQ96RT1 1412 aa14.98□□□□□ -0.01
PCDHGA9-201ENST00000573521 KIAA0586Q9BVV6 1533 aa14.98□□□□□ -0.01
PCDHGA9-201ENST00000573521 SRCIN1Q9C0H9 1055 aa14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 ABCC11Q96J66 1382 aa14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 G3BP1Q13283 466 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 ERC1Q8IUD2 1116 aa14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 TCP11L2Q8N4U5 519 aa14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 C9orf78Q9NZ63 289 aaPredicted RBP14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 BCL2L13Q9BXK5 485 aa14.97□□□□□ -0.01
PCDHGA9-201ENST00000573521 TMX4Q9H1E5 349 aaPredicted RBP14.96□□□□□ -0.01
PCDHGA9-201ENST00000573521 TPD52L1Q16890 204 aaPredicted RBP14.96□□□□□ -0.01
PCDHGA9-201ENST00000573521 CYB5RLQ6IPT4 315 aa14.96□□□□□ -0.01
PCDHGA9-201ENST00000573521 ANO2Q9NQ90 1003 aa14.96□□□□□ -0.01
PCDHGA9-201ENST00000573521 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
PCDHGA9-201ENST00000573521 SLC4A3P48751 1232 aa14.96□□□□□ -0.02
PCDHGA9-201ENST00000573521 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 ARHGAP5Q13017 1502 aa14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 TRDNQ13061 729 aa14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 AEBP1Q8IUX7 1158 aa14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 CNTROBQ8N137 903 aa14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 RASSF8Q8NHQ8 419 aa14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 ATAD2Q6PL18 1390 aa14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
PCDHGA9-201ENST00000573521 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
PCDHGA9-201ENST00000573521 WDR97A6NE52 1622 aa14.94□□□□□ -0.02
PCDHGA9-201ENST00000573521 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA9-201ENST00000573521 CHMP3Q9Y3E7 222 aa14.94□□□□□ -0.02
PCDHGA9-201ENST00000573521 CPLX1O14810 134 aa14.94□□□□□ -0.02
PCDHGA9-201ENST00000573521 ANKRD1Q15327 319 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 BICD2Q8TD16 824 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 SLC52A1Q9NWF4 448 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 PDZRN3Q9UPQ7 1066 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 CDR1P51861 262 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 CCDC30Q5VVM6 783 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 CCT4P50991 539 aaKnown RBP14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 LNPKQ9C0E8 428 aa14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 ERCC4Q92889 916 aaPredicted RBP14.93□□□□□ -0.02
PCDHGA9-201ENST00000573521 THOC2Q8NI27 1593 aaKnown RBP14.92□□□□□ -0.02
PCDHGA9-201ENST00000573521 FKBP5Q13451 457 aaPredicted RBP14.92□□□□□ -0.02
PCDHGA9-201ENST00000573521 SAFBQ15424 915 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCDHGA9-201ENST00000573521 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
PCDHGA9-201ENST00000573521 MVPQ14764 893 aaKnown RBP14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 TTC5Q8N0Z6 440 aa14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 CCDC66A2RUB6 948 aa14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 PIP4K2AP48426 406 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 MTHFSP49914 203 aa14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 MCTP1Q6DN14 999 aa14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 ZNF644Q9H582 1327 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 AMOTL1Q8IY63 956 aa14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 WDR33Q9C0J8 1336 aaKnown RBP14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 NCOA1Q15788 1441 aa14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 TSPY26PQ9H489 355 aa14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
PCDHGA9-201ENST00000573521 DHX16O60231 1041 aaKnown RBP14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 PANK1Q8TE04 598 aa14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 TSPYL4Q9UJ04 414 aa14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 RPAP2Q8IXW5 612 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 VSIG10Q8N0Z9 540 aa14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 CLASRPQ8N2M8 674 aaKnown RBP14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 K7ELQ4 463 aaPredicted RBP14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 ATF7IPQ6VMQ6 1270 aa14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 NOL8Q76FK4 1167 aaKnown RBP14.9□□□□□ -0.02
PCDHGA9-201ENST00000573521 NBPF8Q3BBV2 869 aa14.89□□□□□ -0.03
PCDHGA9-201ENST00000573521 PDCL2Q8N4E4 241 aa14.89□□□□□ -0.03
PCDHGA9-201ENST00000573521 CWC15Q9P013 229 aaKnown RBP14.89□□□□□ -0.03
PCDHGA9-201ENST00000573521 PLEKHH1Q9ULM0 1364 aa14.89□□□□□ -0.03
PCDHGA9-201ENST00000573521 ZSCAN31Q96LW9 406 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA9-201ENST00000573521 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
PCDHGA9-201ENST00000573521 SLFN5Q08AF3 891 aa14.88□□□□□ -0.03
PCDHGA9-201ENST00000573521 NSD2O96028 1365 aa14.88□□□□□ -0.03
PCDHGA9-201ENST00000573521 ZNF771Q7L3S4 317 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA9-201ENST00000573521 ELL2O00472 640 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA9-201ENST00000573521 ZNF396Q96N95 335 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms