RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 LAS1LQ9Y4W2 734 aaKnown RBP14.59□□□□□ -0.07
RPAIN-212ENST00000573126 MTHFSP49914 203 aa14.59□□□□□ -0.07
RPAIN-212ENST00000573126 RPGRIP1LQ68CZ1 1315 aa14.59□□□□□ -0.07
RPAIN-212ENST00000573126 PPLO60437 1756 aa14.59□□□□□ -0.07
RPAIN-212ENST00000573126 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.07
RPAIN-212ENST00000573126 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.08
RPAIN-212ENST00000573126 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
RPAIN-212ENST00000573126 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
RPAIN-212ENST00000573126 CABP2Q9NPB3 220 aa14.57□□□□□ -0.08
RPAIN-212ENST00000573126 VGFO15240 615 aaPredicted RBP14.57□□□□□ -0.08
RPAIN-212ENST00000573126 NGEFQ8N5V2 710 aa14.57□□□□□ -0.08
RPAIN-212ENST00000573126 CANXP27824 592 aaKnown RBP14.57□□□□□ -0.08
RPAIN-212ENST00000573126 CFAP74Q9C0B2 1584 aa14.56□□□□□ -0.08
RPAIN-212ENST00000573126 IDI1Q13907 227 aa14.56□□□□□ -0.08
RPAIN-212ENST00000573126 STK26Q9P289 416 aa14.56□□□□□ -0.08
RPAIN-212ENST00000573126 EVC2Q86UK5 1308 aa14.56□□□□□ -0.08
RPAIN-212ENST00000573126 PANK1Q8TE04 598 aa14.56□□□□□ -0.08
RPAIN-212ENST00000573126 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
RPAIN-212ENST00000573126 RUNDC1Q96C34 613 aa14.56□□□□□ -0.08
RPAIN-212ENST00000573126 COG6Q9Y2V7 657 aa14.55□□□□□ -0.08
RPAIN-212ENST00000573126 SIGLEC1Q9BZZ2 1709 aa14.54□□□□□ -0.08
RPAIN-212ENST00000573126 C8orf34Q49A92 452 aa14.54□□□□□ -0.08
RPAIN-212ENST00000573126 GLI2P10070 1586 aa14.54□□□□□ -0.08
RPAIN-212ENST00000573126 ZC3H13Q5T200 1668 aaKnown RBP14.53□□□□□ -0.08
RPAIN-212ENST00000573126 IGHDP01880 384 aa14.53□□□□□ -0.08
RPAIN-212ENST00000573126 FAM161AQ3B820 660 aa14.53□□□□□ -0.08
RPAIN-212ENST00000573126 CAMSAP1Q5T5Y3 1602 aa14.53□□□□□ -0.08
RPAIN-212ENST00000573126 CFAP53Q96M91 514 aa14.53□□□□□ -0.08
RPAIN-212ENST00000573126 BCL2L13Q9BXK5 485 aa14.53□□□□□ -0.08
RPAIN-212ENST00000573126 TULP4Q9NRJ4 1543 aa14.52□□□□□ -0.08
RPAIN-212ENST00000573126 SHPRHQ149N8 1683 aa14.52□□□□□ -0.08
RPAIN-212ENST00000573126 ANKRD36BQ8N2N9 1353 aa14.52□□□□□ -0.08
RPAIN-212ENST00000573126 U2AF1L5P0DN76 240 aaPredicted RBP14.52□□□□□ -0.09
RPAIN-212ENST00000573126 SLC4A3P48751 1232 aa14.52□□□□□ -0.09
RPAIN-212ENST00000573126 U2AF1Q01081 240 aaKnown RBP eCLIP14.52□□□□□ -0.09
RPAIN-212ENST00000573126 SRPK2P78362 688 aaKnown RBP14.51□□□□□ -0.09
RPAIN-212ENST00000573126 PDE3AQ14432 1141 aa14.51□□□□□ -0.09
RPAIN-212ENST00000573126 NEXMIFQ5QGS0 1516 aa14.51□□□□□ -0.09
RPAIN-212ENST00000573126 YEATS2Q9ULM3 1422 aa14.51□□□□□ -0.09
RPAIN-212ENST00000573126 NEO1Q92859 1461 aa14.51□□□□□ -0.09
RPAIN-212ENST00000573126 NEFMP07197 916 aa14.5□□□□□ -0.09
RPAIN-212ENST00000573126 RARSP54136 660 aaKnown RBP14.5□□□□□ -0.09
RPAIN-212ENST00000573126 CLUAP1Q96AJ1 413 aa14.5□□□□□ -0.09
RPAIN-212ENST00000573126 DDRGK1Q96HY6 314 aa14.5□□□□□ -0.09
RPAIN-212ENST00000573126 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
RPAIN-212ENST00000573126 IQSEC2Q5JU85 1478 aa14.5□□□□□ -0.09
RPAIN-212ENST00000573126 DIP2CQ9Y2E4 1556 aa14.5□□□□□ -0.09
RPAIN-212ENST00000573126 GGNBP2Q9H3C7 697 aa14.49□□□□□ -0.09
RPAIN-212ENST00000573126 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
RPAIN-212ENST00000573126 PIK3C2BO00750 1634 aa14.49□□□□□ -0.09
RPAIN-212ENST00000573126 MINK1Q8N4C8 1332 aaPredicted RBP14.48□□□□□ -0.09
RPAIN-212ENST00000573126 A0A1W2PP64 1363 aa14.48□□□□□ -0.09
RPAIN-212ENST00000573126 RLBP1P12271 317 aa14.48□□□□□ -0.09
RPAIN-212ENST00000573126 WDR63Q8IWG1 891 aa14.48□□□□□ -0.09
RPAIN-212ENST00000573126 ARHGEF28Q8N1W1 1705 aaKnown RBP14.48□□□□□ -0.09
RPAIN-212ENST00000573126 SLC52A1Q9NWF4 448 aa14.48□□□□□ -0.09
RPAIN-212ENST00000573126 PUS7Q96PZ0 661 aaKnown RBP14.47□□□□□ -0.09
RPAIN-212ENST00000573126 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
RPAIN-212ENST00000573126 U2SURPO15042 1029 aaKnown RBP14.47□□□□□ -0.09
RPAIN-212ENST00000573126 FBXO31Q5XUX0 539 aaPredicted RBP14.47□□□□□ -0.09
RPAIN-212ENST00000573126 PRAM1Q96QH2 718 aa14.47□□□□□ -0.09
RPAIN-212ENST00000573126 ARHGAP31Q2M1Z3 1444 aa14.46□□□□□ -0.09
RPAIN-212ENST00000573126 NSD2O96028 1365 aa14.46□□□□□ -0.09
RPAIN-212ENST00000573126 USP32Q8NFA0 1604 aa14.46□□□□□ -0.09
RPAIN-212ENST00000573126 NINLQ9Y2I6 1382 aa14.46□□□□□ -0.09
RPAIN-212ENST00000573126 CCDC27Q2M243 656 aa14.45□□□□□ -0.1
RPAIN-212ENST00000573126 POGKQ9P215 609 aa14.45□□□□□ -0.1
RPAIN-212ENST00000573126 DAXXQ9UER7 740 aaPredicted RBP14.45□□□□□ -0.1
RPAIN-212ENST00000573126 TSR2Q969E8 191 aaKnown RBP14.44□□□□□ -0.1
RPAIN-212ENST00000573126 ABCC11Q96J66 1382 aa14.44□□□□□ -0.1
RPAIN-212ENST00000573126 PPM1GO15355 546 aaPredicted RBP14.43□□□□□ -0.1
RPAIN-212ENST00000573126 MYH16Q9H6N6 1097 aa14.43□□□□□ -0.1
RPAIN-212ENST00000573126 PCDHB15Q9Y5E8 787 aa14.43□□□□□ -0.1
RPAIN-212ENST00000573126 FYB1O15117 783 aa14.43□□□□□ -0.1
RPAIN-212ENST00000573126 ZFYVE9O95405 1425 aa14.42□□□□□ -0.1
RPAIN-212ENST00000573126 CYB5RLQ6IPT4 315 aa14.42□□□□□ -0.1
RPAIN-212ENST00000573126 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
RPAIN-212ENST00000573126 RICTORQ6R327 1708 aa14.41□□□□□ -0.1
RPAIN-212ENST00000573126 TERF2IPQ9NYB0 399 aa14.41□□□□□ -0.1
RPAIN-212ENST00000573126 PTPRMP28827 1452 aa14.41□□□□□ -0.1
RPAIN-212ENST00000573126 USP35Q9P2H5 1018 aa14.41□□□□□ -0.1
RPAIN-212ENST00000573126 YTHDC2Q9H6S0 1430 aaKnown RBP14.41□□□□□ -0.1
RPAIN-212ENST00000573126 ATAD2Q6PL18 1390 aa14.4□□□□□ -0.1
RPAIN-212ENST00000573126 PLEKHF1Q96S99 279 aa14.4□□□□□ -0.1
RPAIN-212ENST00000573126 MAPK8IP3Q9UPT6 1336 aa14.39□□□□□ -0.11
RPAIN-212ENST00000573126 MYO5BQ9ULV0 1848 aa14.39□□□□□ -0.11
RPAIN-212ENST00000573126 SEC24BO95487 1268 aa14.39□□□□□ -0.11
RPAIN-212ENST00000573126 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
RPAIN-212ENST00000573126 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
RPAIN-212ENST00000573126 TMEM131LA2VDJ0 1609 aa14.38□□□□□ -0.11
RPAIN-212ENST00000573126 EXOSC9Q06265 439 aaKnown RBP14.38□□□□□ -0.11
RPAIN-212ENST00000573126 PMFBP1Q8TBY8 1022 aa14.38□□□□□ -0.11
RPAIN-212ENST00000573126 CDK19Q9BWU1 502 aa14.38□□□□□ -0.11
RPAIN-212ENST00000573126 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
RPAIN-212ENST00000573126 TRIM35Q9UPQ4 493 aa14.38□□□□□ -0.11
RPAIN-212ENST00000573126 CD163L1Q9NR16 1453 aa14.37□□□□□ -0.11
RPAIN-212ENST00000573126 FBLN1P23142 703 aa14.37□□□□□ -0.11
RPAIN-212ENST00000573126 SMC4Q9NTJ3 1288 aa14.37□□□□□ -0.11
RPAIN-212ENST00000573126 PREX1Q8TCU6 1659 aa14.37□□□□□ -0.11
RPAIN-212ENST00000573126 USP19O94966 1318 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms