RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 KANK1Q14678 1352 aa14.34□□□□□ -0.11
NPLOC4-210ENST00000572824 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
NPLOC4-210ENST00000572824 PSEN1P49768 467 aa14.34□□□□□ -0.11
NPLOC4-210ENST00000572824 EVX2Q03828 476 aa14.34□□□□□ -0.11
NPLOC4-210ENST00000572824 PAXIP1Q6ZW49 1069 aaPredicted RBP14.34□□□□□ -0.11
NPLOC4-210ENST00000572824 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
NPLOC4-210ENST00000572824 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
NPLOC4-210ENST00000572824 RBM33Q96EV2 1170 aaKnown RBP14.32□□□□□ -0.12
NPLOC4-210ENST00000572824 TMEM131LA2VDJ0 1609 aa14.32□□□□□ -0.12
NPLOC4-210ENST00000572824 IQGAP3Q86VI3 1631 aa14.31□□□□□ -0.12
NPLOC4-210ENST00000572824 POTEHQ6S545 545 aa14.31□□□□□ -0.12
NPLOC4-210ENST00000572824 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
NPLOC4-210ENST00000572824 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
NPLOC4-210ENST00000572824 ITGAEP38570 1179 aa14.29□□□□□ -0.12
NPLOC4-210ENST00000572824 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
NPLOC4-210ENST00000572824 SLC26A8Q96RN1 970 aa14.29□□□□□ -0.12
NPLOC4-210ENST00000572824 ZFYVE9O95405 1425 aa14.29□□□□□ -0.12
NPLOC4-210ENST00000572824 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
NPLOC4-210ENST00000572824 TOM1O60784 492 aa14.27□□□□□ -0.13
NPLOC4-210ENST00000572824 CHD2O14647 1828 aaKnown RBP14.27□□□□□ -0.13
NPLOC4-210ENST00000572824 NUTM2DQ5VT03 806 aaPredicted RBP14.26□□□□□ -0.13
NPLOC4-210ENST00000572824 ROBO1Q9Y6N7 1651 aa14.26□□□□□ -0.13
NPLOC4-210ENST00000572824 RPRD2Q5VT52 1461 aaKnown RBP14.25□□□□□ -0.13
NPLOC4-210ENST00000572824 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
NPLOC4-210ENST00000572824 RIMS2Q9UQ26 1411 aa14.24□□□□□ -0.13
NPLOC4-210ENST00000572824 SOCS7O14512 581 aa14.24□□□□□ -0.13
NPLOC4-210ENST00000572824 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
NPLOC4-210ENST00000572824 EID1Q9Y6B2 187 aa14.24□□□□□ -0.13
NPLOC4-210ENST00000572824 SPHKAPQ2M3C7 1700 aa14.24□□□□□ -0.13
NPLOC4-210ENST00000572824 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
NPLOC4-210ENST00000572824 ROCK1Q13464 1354 aa14.22□□□□□ -0.13
NPLOC4-210ENST00000572824 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
NPLOC4-210ENST00000572824 CLTCL1P53675 1640 aa14.2□□□□□ -0.14
NPLOC4-210ENST00000572824 GTPBP6O43824 516 aaPredicted RBP14.2□□□□□ -0.14
NPLOC4-210ENST00000572824 ADAMTS13Q76LX8 1427 aa14.2□□□□□ -0.14
NPLOC4-210ENST00000572824 NKTRP30414 1462 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-210ENST00000572824 CLCN6P51797 869 aa14.19□□□□□ -0.14
NPLOC4-210ENST00000572824 NUP155O75694 1391 aa14.19□□□□□ -0.14
NPLOC4-210ENST00000572824 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
NPLOC4-210ENST00000572824 PLEKHG1Q9ULL1 1385 aa14.18□□□□□ -0.14
NPLOC4-210ENST00000572824 KCNA6P17658 529 aa14.17□□□□□ -0.14
NPLOC4-210ENST00000572824 BCANQ96GW7 911 aa14.17□□□□□ -0.14
NPLOC4-210ENST00000572824 SLC52A1Q9NWF4 448 aa14.17□□□□□ -0.14
NPLOC4-210ENST00000572824 PTPRUQ92729 1446 aa14.16□□□□□ -0.14
NPLOC4-210ENST00000572824 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
NPLOC4-210ENST00000572824 TMEM106CQ9BVX2 250 aa14.16□□□□□ -0.14
NPLOC4-210ENST00000572824 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
NPLOC4-210ENST00000572824 RRBP1Q9P2E9 1410 aaKnown RBP14.15□□□□□ -0.14
NPLOC4-210ENST00000572824 PHLPP1O60346 1717 aa14.15□□□□□ -0.14
NPLOC4-210ENST00000572824 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
NPLOC4-210ENST00000572824 PPP1R15AO75807 674 aaPredicted RBP14.14□□□□□ -0.15
NPLOC4-210ENST00000572824 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
NPLOC4-210ENST00000572824 TIE1P35590 1138 aa14.13□□□□□ -0.15
NPLOC4-210ENST00000572824 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
NPLOC4-210ENST00000572824 RGS17Q9UGC6 210 aaPredicted RBP14.13□□□□□ -0.15
NPLOC4-210ENST00000572824 NAIPQ13075 1403 aa14.13□□□□□ -0.15
NPLOC4-210ENST00000572824 SETD1AO15047 1707 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-210ENST00000572824 COL16A1Q07092 1604 aaPredicted RBP14.12□□□□□ -0.15
NPLOC4-210ENST00000572824 NEXMIFQ5QGS0 1516 aa14.12□□□□□ -0.15
NPLOC4-210ENST00000572824 RYDENQ9NUL5 291 aaKnown RBP14.12□□□□□ -0.15
NPLOC4-210ENST00000572824 FAM135BQ49AJ0 1406 aa14.12□□□□□ -0.15
NPLOC4-210ENST00000572824 DIP2AQ14689 1571 aa14.12□□□□□ -0.15
NPLOC4-210ENST00000572824 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
NPLOC4-210ENST00000572824 KIF1BO60333 1816 aa14.1□□□□□ -0.15
NPLOC4-210ENST00000572824 TRPM2O94759 1503 aa14.1□□□□□ -0.15
NPLOC4-210ENST00000572824 SETBP1Q9Y6X0 1596 aa14.09□□□□□ -0.15
NPLOC4-210ENST00000572824 MFRPQ9BY79 579 aa14.09□□□□□ -0.15
NPLOC4-210ENST00000572824 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-210ENST00000572824 NALCNQ8IZF0 1738 aa14.09□□□□□ -0.15
NPLOC4-210ENST00000572824 MSH6P52701 1360 aa14.09□□□□□ -0.15
NPLOC4-210ENST00000572824 TTLL13PA6NNM8 815 aa14.08□□□□□ -0.16
NPLOC4-210ENST00000572824 LRP6O75581 1613 aa14.08□□□□□ -0.16
NPLOC4-210ENST00000572824 SOX12O15370 315 aa14.07□□□□□ -0.16
NPLOC4-210ENST00000572824 GABBR2O75899 941 aa14.06□□□□□ -0.16
NPLOC4-210ENST00000572824 METP08581 1390 aa14.06□□□□□ -0.16
NPLOC4-210ENST00000572824 PPLO60437 1756 aa14.05□□□□□ -0.16
NPLOC4-210ENST00000572824 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
NPLOC4-210ENST00000572824 TBX22Q9Y458 520 aa14.05□□□□□ -0.16
NPLOC4-210ENST00000572824 SLAIN2Q9P270 581 aa14.04□□□□□ -0.16
NPLOC4-210ENST00000572824 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
NPLOC4-210ENST00000572824 GOLGA2Q08379 1002 aa14.03□□□□□ -0.16
NPLOC4-210ENST00000572824 POTEAQ6S8J7 498 aa14.03□□□□□ -0.16
NPLOC4-210ENST00000572824 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
NPLOC4-210ENST00000572824 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.17
NPLOC4-210ENST00000572824 C14orf37Q86TY3 774 aa14.02□□□□□ -0.17
NPLOC4-210ENST00000572824 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.02□□□□□ -0.17
NPLOC4-210ENST00000572824 FBXO22Q8NEZ5 403 aa14.02□□□□□ -0.17
NPLOC4-210ENST00000572824 PHF8Q9UPP1 1060 aa14.02□□□□□ -0.17
NPLOC4-210ENST00000572824 AMOTL2Q9Y2J4 779 aa14.02□□□□□ -0.17
NPLOC4-210ENST00000572824 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
NPLOC4-210ENST00000572824 NLRP6P59044 892 aa14.01□□□□□ -0.17
NPLOC4-210ENST00000572824 NHSL1Q5SYE7 1610 aa14.01□□□□□ -0.17
NPLOC4-210ENST00000572824 ASXL1Q8IXJ9 1541 aa14□□□□□ -0.17
NPLOC4-210ENST00000572824 MST1RQ04912 1400 aa13.99□□□□□ -0.17
NPLOC4-210ENST00000572824 PIK3R4Q99570 1358 aa13.99□□□□□ -0.17
NPLOC4-210ENST00000572824 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
NPLOC4-210ENST00000572824 IFT172Q9UG01 1749 aa13.98□□□□□ -0.17
NPLOC4-210ENST00000572824 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
NPLOC4-210ENST00000572824 TRIM52Q96A61 297 aa13.98□□□□□ -0.17
NPLOC4-210ENST00000572824 TRIM35Q9UPQ4 493 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms