RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 TXNDC2Q86VQ3 553 aa16.33■□□□□ 0.2
TOM1L1-213ENST00000572405 CARD14Q9BXL6 1004 aa16.33■□□□□ 0.2
TOM1L1-213ENST00000572405 SLC12A5Q9H2X9 1139 aa16.33■□□□□ 0.2
TOM1L1-213ENST00000572405 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
TOM1L1-213ENST00000572405 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
TOM1L1-213ENST00000572405 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
TOM1L1-213ENST00000572405 ABCC11Q96J66 1382 aa16.32■□□□□ 0.2
TOM1L1-213ENST00000572405 WAPLQ7Z5K2 1190 aa16.31■□□□□ 0.2
TOM1L1-213ENST00000572405 EID1Q9Y6B2 187 aa16.3■□□□□ 0.2
TOM1L1-213ENST00000572405 SRPK2P78362 688 aaKnown RBP16.3■□□□□ 0.2
TOM1L1-213ENST00000572405 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
TOM1L1-213ENST00000572405 NSD3Q9BZ95 1437 aa16.29■□□□□ 0.2
TOM1L1-213ENST00000572405 THEMISQ8N1K5 641 aaPredicted RBP16.29■□□□□ 0.2
TOM1L1-213ENST00000572405 PNISRQ8TF01 805 aaKnown RBP16.29■□□□□ 0.2
TOM1L1-213ENST00000572405 PUS7Q96PZ0 661 aaKnown RBP16.29■□□□□ 0.2
TOM1L1-213ENST00000572405 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
TOM1L1-213ENST00000572405 CPS1P31327 1500 aa16.28■□□□□ 0.2
TOM1L1-213ENST00000572405 SLC26A8Q96RN1 970 aa16.28■□□□□ 0.2
TOM1L1-213ENST00000572405 TECPR2O15040 1411 aa16.28■□□□□ 0.2
TOM1L1-213ENST00000572405 MED14O60244 1454 aa16.26■□□□□ 0.19
TOM1L1-213ENST00000572405 CDK19Q9BWU1 502 aa16.25■□□□□ 0.19
TOM1L1-213ENST00000572405 ATAD2Q6PL18 1390 aa16.25■□□□□ 0.19
TOM1L1-213ENST00000572405 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
TOM1L1-213ENST00000572405 ANKRD36BQ8N2N9 1353 aa16.25■□□□□ 0.19
TOM1L1-213ENST00000572405 PPP2R1AP30153 589 aa16.24■□□□□ 0.19
TOM1L1-213ENST00000572405 ROBO2Q9HCK4 1378 aa16.24■□□□□ 0.19
TOM1L1-213ENST00000572405 FAM135BQ49AJ0 1406 aa16.24■□□□□ 0.19
TOM1L1-213ENST00000572405 PTPRUQ92729 1446 aa16.23■□□□□ 0.19
TOM1L1-213ENST00000572405 A0A1W2PP64 1363 aa16.23■□□□□ 0.19
TOM1L1-213ENST00000572405 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
TOM1L1-213ENST00000572405 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
TOM1L1-213ENST00000572405 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
TOM1L1-213ENST00000572405 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
TOM1L1-213ENST00000572405 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
TOM1L1-213ENST00000572405 ZBED9Q6R2W3 1325 aa16.2■□□□□ 0.18
TOM1L1-213ENST00000572405 SETD1BQ9UPS6 1966 aaKnown RBP16.2■□□□□ 0.18
TOM1L1-213ENST00000572405 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
TOM1L1-213ENST00000572405 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
TOM1L1-213ENST00000572405 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
TOM1L1-213ENST00000572405 WASLO00401 505 aaPredicted RBP16.18■□□□□ 0.18
TOM1L1-213ENST00000572405 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
TOM1L1-213ENST00000572405 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.17■□□□□ 0.18
TOM1L1-213ENST00000572405 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
TOM1L1-213ENST00000572405 TERF2IPQ9NYB0 399 aa16.16■□□□□ 0.18
TOM1L1-213ENST00000572405 TNNT2P45379 298 aaPredicted RBP16.16■□□□□ 0.18
TOM1L1-213ENST00000572405 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
TOM1L1-213ENST00000572405 ADGRB2O60241 1585 aa16.15■□□□□ 0.18
TOM1L1-213ENST00000572405 XRN1Q8IZH2 1706 aaKnown RBP16.15■□□□□ 0.18
TOM1L1-213ENST00000572405 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
TOM1L1-213ENST00000572405 ANKLE2Q86XL3 938 aa16.14■□□□□ 0.18
TOM1L1-213ENST00000572405 PPIP5K1Q6PFW1 1433 aa16.14■□□□□ 0.17
TOM1L1-213ENST00000572405 NCKAP5LQ9HCH0 1330 aa16.14■□□□□ 0.17
TOM1L1-213ENST00000572405 ATP7BP35670 1465 aa16.14■□□□□ 0.17
TOM1L1-213ENST00000572405 HDGFL2Q7Z4V5 671 aaPredicted RBP16.13■□□□□ 0.17
TOM1L1-213ENST00000572405 NSD2O96028 1365 aa16.13■□□□□ 0.17
TOM1L1-213ENST00000572405 NUDT16Q96DE0 195 aaKnown RBP16.12■□□□□ 0.17
TOM1L1-213ENST00000572405 BLMP54132 1417 aaPredicted RBP16.12■□□□□ 0.17
TOM1L1-213ENST00000572405 PRR36Q9H6K5 1346 aa16.12■□□□□ 0.17
TOM1L1-213ENST00000572405 GGNBP2Q9H3C7 697 aa16.11■□□□□ 0.17
TOM1L1-213ENST00000572405 KCNA6P17658 529 aa16.11■□□□□ 0.17
TOM1L1-213ENST00000572405 ADAMTS8Q9UP79 889 aa16.11■□□□□ 0.17
TOM1L1-213ENST00000572405 WDR43Q15061 677 aaKnown RBP eCLIP16.1■□□□□ 0.17
TOM1L1-213ENST00000572405 CDC42BPGQ6DT37 1551 aa16.09■□□□□ 0.17
TOM1L1-213ENST00000572405 NUTM2FA1L443 756 aa16.09■□□□□ 0.17
TOM1L1-213ENST00000572405 CCDC61Q9Y6R9 512 aa16.09■□□□□ 0.17
TOM1L1-213ENST00000572405 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
TOM1L1-213ENST00000572405 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
TOM1L1-213ENST00000572405 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
TOM1L1-213ENST00000572405 FYB1O15117 783 aa16.08■□□□□ 0.17
TOM1L1-213ENST00000572405 CPSF1Q10570 1443 aaKnown RBP16.08■□□□□ 0.17
TOM1L1-213ENST00000572405 INSRP06213 1382 aa16.08■□□□□ 0.16
TOM1L1-213ENST00000572405 TOPAZ1Q8N9V7 1692 aa16.08■□□□□ 0.16
TOM1L1-213ENST00000572405 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
TOM1L1-213ENST00000572405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.167e-7■■□□□ 13.6
TOM1L1-213ENST00000572405 SALL2Q9Y467 1007 aaPredicted RBP16.07■□□□□ 0.16
TOM1L1-213ENST00000572405 POLR3AO14802 1390 aaPredicted RBP16.07■□□□□ 0.16
TOM1L1-213ENST00000572405 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
TOM1L1-213ENST00000572405 ITSN1Q15811 1721 aa16.06■□□□□ 0.16
TOM1L1-213ENST00000572405 MON2Q7Z3U7 1717 aa16.06■□□□□ 0.16
TOM1L1-213ENST00000572405 MTHFSP49914 203 aa16.05■□□□□ 0.16
TOM1L1-213ENST00000572405 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
TOM1L1-213ENST00000572405 EDC4Q6P2E9 1401 aaKnown RBP16.05■□□□□ 0.16
TOM1L1-213ENST00000572405 AKAP12Q02952 1782 aa16.05■□□□□ 0.16
TOM1L1-213ENST00000572405 SHPRHQ149N8 1683 aa16.05■□□□□ 0.16
TOM1L1-213ENST00000572405 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
TOM1L1-213ENST00000572405 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.16
TOM1L1-213ENST00000572405 CCDC146Q8IYE0 955 aa16.02■□□□□ 0.15
TOM1L1-213ENST00000572405 NME9Q86XW9 330 aa16.01■□□□□ 0.15
TOM1L1-213ENST00000572405 RBM33Q96EV2 1170 aaKnown RBP16.01■□□□□ 0.15
TOM1L1-213ENST00000572405 NALCNQ8IZF0 1738 aa16.01■□□□□ 0.15
TOM1L1-213ENST00000572405 RGPD8O14715 1765 aaPredicted RBP16■□□□□ 0.15
TOM1L1-213ENST00000572405 NUDCQ9Y266 331 aa16■□□□□ 0.15
TOM1L1-213ENST00000572405 ACEP12821 1306 aa16■□□□□ 0.15
TOM1L1-213ENST00000572405 ZRANB1Q9UGI0 708 aa16■□□□□ 0.15
TOM1L1-213ENST00000572405 NRKQ7Z2Y5 1582 aa15.99■□□□□ 0.15
TOM1L1-213ENST00000572405 FKBP8Q14318 412 aa15.99■□□□□ 0.15
TOM1L1-213ENST00000572405 CFAP53Q96M91 514 aa15.99■□□□□ 0.15
TOM1L1-213ENST00000572405 PLEKHG3A1L390 1219 aa15.99■□□□□ 0.15
TOM1L1-213ENST00000572405 FMN2Q9NZ56 1722 aa15.98■□□□□ 0.15
TOM1L1-213ENST00000572405 NEFLP07196 543 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms