RNA–Protein interactions for RNA: ENST00000572360.5

TOM1L1-212, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-212ENST00000572360 HOXA2O43364 376 aa8.17□□□□□ -1.1
TOM1L1-212ENST00000572360 FOXC1Q12948 553 aa8.17□□□□□ -1.1
TOM1L1-212ENST00000572360 ST8SIA5O15466 376 aa8.16□□□□□ -1.1
TOM1L1-212ENST00000572360 DXOO77932 396 aaKnown RBP8.16□□□□□ -1.1
TOM1L1-212ENST00000572360 GPCPD1Q9NPB8 672 aa8.16□□□□□ -1.1
TOM1L1-212ENST00000572360 AAASQ9NRG9 546 aa8.16□□□□□ -1.1
TOM1L1-212ENST00000572360 ZMYND10O75800 440 aa8.15□□□□□ -1.1
TOM1L1-212ENST00000572360 Q3C1V9 767 aa8.15□□□□□ -1.1
TOM1L1-212ENST00000572360 GRIPAP1Q4V328 841 aa8.15□□□□□ -1.1
TOM1L1-212ENST00000572360 LMOD2Q6P5Q4 547 aa8.15□□□□□ -1.1
TOM1L1-212ENST00000572360 SYMPKQ92797 1274 aaKnown RBP8.15□□□□□ -1.1
TOM1L1-212ENST00000572360 USB1Q9BQ65 265 aaKnown RBP8.15□□□□□ -1.1
TOM1L1-212ENST00000572360 TULP1O00294 542 aaPredicted RBP8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 CD2BP2O95400 341 aaKnown RBP8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 CLCN1P35523 988 aa8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 USP46P62068 366 aa8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 BARGINQ6ZT62 677 aa8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 DACH1Q9UI36 760 aa8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 PCDHGC3Q9UN70 934 aa8.13□□□□□ -1.11
TOM1L1-212ENST00000572360 AVPP01185 164 aa8.12□□□□□ -1.11
TOM1L1-212ENST00000572360 ZC3H15Q8WU90 426 aaKnown RBP8.12□□□□□ -1.11
TOM1L1-212ENST00000572360 TRIM32Q13049 653 aa8.11□□□□□ -1.11
TOM1L1-212ENST00000572360 CRIPAKQ8N1N5 446 aa8.11□□□□□ -1.11
TOM1L1-212ENST00000572360 WNT7AO00755 349 aa8.09□□□□□ -1.11
TOM1L1-212ENST00000572360 SMPD1P17405 629 aa8.09□□□□□ -1.11
TOM1L1-212ENST00000572360 SSTR3P32745 418 aaPredicted RBP8.09□□□□□ -1.11
TOM1L1-212ENST00000572360 SKOR1P84550 965 aa8.09□□□□□ -1.11
TOM1L1-212ENST00000572360 AMHR2Q16671 573 aa8.08□□□□□ -1.12
TOM1L1-212ENST00000572360 PTCRAQ6ISU1 281 aaPredicted RBP8.08□□□□□ -1.12
TOM1L1-212ENST00000572360 SPIRE2Q8WWL2 714 aa8.08□□□□□ -1.12
TOM1L1-212ENST00000572360 MRGPRX2Q96LB1 330 aa8.08□□□□□ -1.12
TOM1L1-212ENST00000572360 JUNDP17535 347 aa8.07□□□□□ -1.12
TOM1L1-212ENST00000572360 NDUFV2P19404 249 aa8.06□□□□□ -1.12
TOM1L1-212ENST00000572360 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
TOM1L1-212ENST00000572360 CYP4X1Q8N118 509 aa8.06□□□□□ -1.12
TOM1L1-212ENST00000572360 J3QL48 77 aa8.05□□□□□ -1.12
TOM1L1-212ENST00000572360 ZBTB24O43167 697 aaPredicted RBP8.05□□□□□ -1.12
TOM1L1-212ENST00000572360 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
TOM1L1-212ENST00000572360 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
TOM1L1-212ENST00000572360 MOXD2PA6NHM9 499 aa8.04□□□□□ -1.12
TOM1L1-212ENST00000572360 FDX1P10109 184 aa8.04□□□□□ -1.12
TOM1L1-212ENST00000572360 GIGYF2Q6Y7W6 1299 aaKnown RBP8.04□□□□□ -1.12
TOM1L1-212ENST00000572360 RETREG3Q86VR2 466 aa8.04□□□□□ -1.12
TOM1L1-212ENST00000572360 NUTM1Q86Y26 1132 aa8.04□□□□□ -1.12
TOM1L1-212ENST00000572360 CCDC24Q8N4L8 307 aa8.03□□□□□ -1.12
TOM1L1-212ENST00000572360 KRI1Q8N9T8 703 aaKnown RBP8.03□□□□□ -1.12
TOM1L1-212ENST00000572360 RC3H1Q5TC82 1133 aaKnown RBP8.02□□□□□ -1.13
TOM1L1-212ENST00000572360 PARP9Q8IXQ6 854 aa8.02□□□□□ -1.13
TOM1L1-212ENST00000572360 GMPR2Q9P2T1 348 aaKnown RBP8.02□□□□□ -1.13
TOM1L1-212ENST00000572360 TTC24A2A3L6 582 aaPredicted RBP8.01□□□□□ -1.13
TOM1L1-212ENST00000572360 TRIM66O15016 1216 aa8.01□□□□□ -1.13
TOM1L1-212ENST00000572360 SIAH2O43255 324 aa8.01□□□□□ -1.13
TOM1L1-212ENST00000572360 MS4A1P11836 297 aa8.01□□□□□ -1.13
TOM1L1-212ENST00000572360 HPS1Q92902 700 aa8.01□□□□□ -1.13
TOM1L1-212ENST00000572360 NISCHQ9Y2I1 1504 aa8□□□□□ -1.13
TOM1L1-212ENST00000572360 AXIN1O15169 862 aa8□□□□□ -1.13
TOM1L1-212ENST00000572360 WNT7BP56706 349 aa8□□□□□ -1.13
TOM1L1-212ENST00000572360 TTLL12Q14166 644 aaPredicted RBP8□□□□□ -1.13
TOM1L1-212ENST00000572360 CTC1Q2NKJ3 1217 aa8□□□□□ -1.13
TOM1L1-212ENST00000572360 NUDT12Q9BQG2 462 aa8□□□□□ -1.13
TOM1L1-212ENST00000572360 C6orf229H3BNL8 230 aa7.99□□□□□ -1.13
TOM1L1-212ENST00000572360 BEGAINQ9BUH8 593 aa7.99□□□□□ -1.13
TOM1L1-212ENST00000572360 TBC1D2Q9BYX2 928 aa7.98□□□□□ -1.13
TOM1L1-212ENST00000572360 PCDHB15Q9Y5E8 787 aa7.98□□□□□ -1.13
TOM1L1-212ENST00000572360 SH3BP2P78314 561 aa7.97□□□□□ -1.13
TOM1L1-212ENST00000572360 EVA1BQ9NVM1 165 aa7.97□□□□□ -1.13
TOM1L1-212ENST00000572360 CCNYL3P0C7X3 344 aa7.96□□□□□ -1.14
TOM1L1-212ENST00000572360 LCE2CQ5TA81 110 aa7.96□□□□□ -1.14
TOM1L1-212ENST00000572360 RSBN1LQ6PCB5 846 aaPredicted RBP7.96□□□□□ -1.14
TOM1L1-212ENST00000572360 PRR7Q8TB68 274 aa7.96□□□□□ -1.14
TOM1L1-212ENST00000572360 ATP13A2Q9NQ11 1180 aa7.96□□□□□ -1.14
TOM1L1-212ENST00000572360 CFAP99D6REC4 459 aa7.95□□□□□ -1.14
TOM1L1-212ENST00000572360 SNRPBP14678 240 aaKnown RBP7.95□□□□□ -1.14
TOM1L1-212ENST00000572360 GJA5P36382 358 aa7.95□□□□□ -1.14
TOM1L1-212ENST00000572360 MTMR2Q13614 643 aa7.95□□□□□ -1.14
TOM1L1-212ENST00000572360 PTPRNQ16849 979 aa7.95□□□□□ -1.14
TOM1L1-212ENST00000572360 TREML4Q6UXN2 200 aa7.95□□□□□ -1.14
TOM1L1-212ENST00000572360 SPTLC1O15269 473 aa7.94□□□□□ -1.14
TOM1L1-212ENST00000572360 DESI1Q6ICB0 168 aa7.94□□□□□ -1.14
TOM1L1-212ENST00000572360 UNC93B1Q9H1C4 597 aa7.94□□□□□ -1.14
TOM1L1-212ENST00000572360 C11orf95C9JLR9 678 aaPredicted RBP7.93□□□□□ -1.14
TOM1L1-212ENST00000572360 KCNH2Q12809 1159 aa7.93□□□□□ -1.14
TOM1L1-212ENST00000572360 BAP1Q92560 729 aa7.93□□□□□ -1.14
TOM1L1-212ENST00000572360 AK7Q96M32 723 aa7.93□□□□□ -1.14
TOM1L1-212ENST00000572360 ALDH1A1P00352 501 aa7.92□□□□□ -1.14
TOM1L1-212ENST00000572360 HRCP23327 699 aa7.91□□□□□ -1.14
TOM1L1-212ENST00000572360 NFX1Q12986 1120 aaKnown RBP7.91□□□□□ -1.14
TOM1L1-212ENST00000572360 LYPD8Q6UX82 237 aa7.91□□□□□ -1.14
TOM1L1-212ENST00000572360 CABLES1Q8TDN4 633 aa7.91□□□□□ -1.14
TOM1L1-212ENST00000572360 SPDYE5A6NIY4 337 aa7.9□□□□□ -1.14
TOM1L1-212ENST00000572360 F12P00748 615 aaPredicted RBP7.9□□□□□ -1.14
TOM1L1-212ENST00000572360 PDE4DQ08499 809 aa7.9□□□□□ -1.14
TOM1L1-212ENST00000572360 LINC01559Q495D7 138 aa7.9□□□□□ -1.14
TOM1L1-212ENST00000572360 EHBP1Q8NDI1 1231 aa7.9□□□□□ -1.14
TOM1L1-212ENST00000572360 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
TOM1L1-212ENST00000572360 LIMD1Q9UGP4 676 aa7.9□□□□□ -1.14
TOM1L1-212ENST00000572360 RIC3Q7Z5B4 369 aa7.89□□□□□ -1.15
TOM1L1-212ENST00000572360 ZNF511Q8NB15 262 aa7.89□□□□□ -1.15
TOM1L1-212ENST00000572360 PER1O15534 1290 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms