RNA–Protein interactions for RNA: ENST00000572353.1

LINC01978-201, Transcript of long intergenic non-protein coding RNA 1978, humanhuman

TSL 2

Gene LINC01978, Length 540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01978-201ENST00000572353 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
LINC01978-201ENST00000572353 SETD1BQ9UPS6 1966 aaKnown RBP16.89■□□□□ 0.29
LINC01978-201ENST00000572353 AMOTL2Q9Y2J4 779 aa16.88■□□□□ 0.29
LINC01978-201ENST00000572353 NPHP4O75161 1426 aaPredicted RBP16.87■□□□□ 0.29
LINC01978-201ENST00000572353 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
LINC01978-201ENST00000572353 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
LINC01978-201ENST00000572353 SRPK2P78362 688 aaKnown RBP16.87■□□□□ 0.29
LINC01978-201ENST00000572353 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
LINC01978-201ENST00000572353 CCER2I3L3R5 266 aa16.86■□□□□ 0.29
LINC01978-201ENST00000572353 HSPA2P54652 639 aa16.86■□□□□ 0.29
LINC01978-201ENST00000572353 SIRT1Q96EB6 747 aa16.86■□□□□ 0.29
LINC01978-201ENST00000572353 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
LINC01978-201ENST00000572353 SLC12A5Q9H2X9 1139 aa16.86■□□□□ 0.29
LINC01978-201ENST00000572353 CCDC184Q52MB2 194 aa16.84■□□□□ 0.29
LINC01978-201ENST00000572353 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
LINC01978-201ENST00000572353 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
LINC01978-201ENST00000572353 PTCH1Q13635 1447 aa16.82■□□□□ 0.28
LINC01978-201ENST00000572353 KCNA6P17658 529 aa16.82■□□□□ 0.28
LINC01978-201ENST00000572353 PUS7Q96PZ0 661 aaKnown RBP16.82■□□□□ 0.28
LINC01978-201ENST00000572353 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
LINC01978-201ENST00000572353 KTN1Q86UP2 1357 aaKnown RBP16.81■□□□□ 0.28
LINC01978-201ENST00000572353 PIK3R4Q99570 1358 aa16.81■□□□□ 0.28
LINC01978-201ENST00000572353 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
LINC01978-201ENST00000572353 ATAD2Q6PL18 1390 aa16.8■□□□□ 0.28
LINC01978-201ENST00000572353 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
LINC01978-201ENST00000572353 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
LINC01978-201ENST00000572353 AMER1Q5JTC6 1135 aaPredicted RBP16.79■□□□□ 0.28
LINC01978-201ENST00000572353 LMTK3Q96Q04 1460 aa16.79■□□□□ 0.28
LINC01978-201ENST00000572353 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
LINC01978-201ENST00000572353 PARD3Q8TEW0 1356 aa16.78■□□□□ 0.28
LINC01978-201ENST00000572353 RALBP1Q15311 655 aa16.77■□□□□ 0.28
LINC01978-201ENST00000572353 RBM33Q96EV2 1170 aaKnown RBP16.76■□□□□ 0.27
LINC01978-201ENST00000572353 MRS2Q9HD23 443 aa16.76■□□□□ 0.27
LINC01978-201ENST00000572353 CABP1Q9NZU7 370 aa16.76■□□□□ 0.27
LINC01978-201ENST00000572353 ADGRB2O60241 1585 aa16.76■□□□□ 0.27
LINC01978-201ENST00000572353 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
LINC01978-201ENST00000572353 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
LINC01978-201ENST00000572353 NUDT16Q96DE0 195 aaKnown RBP16.75■□□□□ 0.27
LINC01978-201ENST00000572353 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
LINC01978-201ENST00000572353 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
LINC01978-201ENST00000572353 CD163L1Q9NR16 1453 aa16.74■□□□□ 0.27
LINC01978-201ENST00000572353 MYBBP1AQ9BQG0 1328 aaKnown RBP16.74■□□□□ 0.27
LINC01978-201ENST00000572353 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
LINC01978-201ENST00000572353 PPIP5K1Q6PFW1 1433 aa16.72■□□□□ 0.27
LINC01978-201ENST00000572353 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
LINC01978-201ENST00000572353 ATP7BP35670 1465 aa16.72■□□□□ 0.27
LINC01978-201ENST00000572353 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
LINC01978-201ENST00000572353 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
LINC01978-201ENST00000572353 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
LINC01978-201ENST00000572353 HDGFL2Q7Z4V5 671 aaPredicted RBP16.7■□□□□ 0.26
LINC01978-201ENST00000572353 NLRP13Q86W25 1043 aa16.68■□□□□ 0.26
LINC01978-201ENST00000572353 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
LINC01978-201ENST00000572353 BRD4O60885 1362 aaPredicted RBP16.67■□□□□ 0.26
LINC01978-201ENST00000572353 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
LINC01978-201ENST00000572353 FAM9BQ8IZU0 186 aa16.67■□□□□ 0.26
LINC01978-201ENST00000572353 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
LINC01978-201ENST00000572353 USP32Q8NFA0 1604 aa16.67■□□□□ 0.26
LINC01978-201ENST00000572353 CDC42BPGQ6DT37 1551 aa16.66■□□□□ 0.26
LINC01978-201ENST00000572353 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
LINC01978-201ENST00000572353 NALCNQ8IZF0 1738 aa16.66■□□□□ 0.26
LINC01978-201ENST00000572353 ADGRL3Q9HAR2 1447 aa16.65■□□□□ 0.26
LINC01978-201ENST00000572353 C14orf37Q86TY3 774 aa16.65■□□□□ 0.26
LINC01978-201ENST00000572353 MORC1Q86VD1 984 aa16.65■□□□□ 0.26
LINC01978-201ENST00000572353 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
LINC01978-201ENST00000572353 STRCQ7RTU9 1775 aa16.64■□□□□ 0.25
LINC01978-201ENST00000572353 CPSF1Q10570 1443 aaKnown RBP16.64■□□□□ 0.25
LINC01978-201ENST00000572353 TNNT2P45379 298 aaPredicted RBP16.64■□□□□ 0.25
LINC01978-201ENST00000572353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01978-201ENST00000572353 TOPAZ1Q8N9V7 1692 aa16.64■□□□□ 0.25
LINC01978-201ENST00000572353 GGNBP2Q9H3C7 697 aa16.63■□□□□ 0.25
LINC01978-201ENST00000572353 PMFBP1Q8TBY8 1022 aa16.62■□□□□ 0.25
LINC01978-201ENST00000572353 ACEP12821 1306 aa16.62■□□□□ 0.25
LINC01978-201ENST00000572353 NSD2O96028 1365 aa16.62■□□□□ 0.25
LINC01978-201ENST00000572353 FMN2Q9NZ56 1722 aa16.62■□□□□ 0.25
LINC01978-201ENST00000572353 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
LINC01978-201ENST00000572353 FYB1O15117 783 aa16.61■□□□□ 0.25
LINC01978-201ENST00000572353 PNISRQ8TF01 805 aaKnown RBP16.61■□□□□ 0.25
LINC01978-201ENST00000572353 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
LINC01978-201ENST00000572353 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
LINC01978-201ENST00000572353 ANKARQ7Z5J8 1434 aa16.61■□□□□ 0.25
LINC01978-201ENST00000572353 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
LINC01978-201ENST00000572353 NME9Q86XW9 330 aa16.59■□□□□ 0.25
LINC01978-201ENST00000572353 ZRANB1Q9UGI0 708 aa16.59■□□□□ 0.25
LINC01978-201ENST00000572353 TMEM94Q12767 1356 aa16.59■□□□□ 0.25
LINC01978-201ENST00000572353 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.24
LINC01978-201ENST00000572353 ITSN1Q15811 1721 aa16.57■□□□□ 0.24
LINC01978-201ENST00000572353 MON2Q7Z3U7 1717 aa16.57■□□□□ 0.24
LINC01978-201ENST00000572353 ZNF335Q9H4Z2 1342 aaPredicted RBP16.57■□□□□ 0.24
LINC01978-201ENST00000572353 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
LINC01978-201ENST00000572353 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
LINC01978-201ENST00000572353 TTC21BQ7Z4L5 1316 aa16.56■□□□□ 0.24
LINC01978-201ENST00000572353 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
LINC01978-201ENST00000572353 USP6P35125 1406 aa16.55■□□□□ 0.24
LINC01978-201ENST00000572353 POLR3AO14802 1390 aaPredicted RBP16.55■□□□□ 0.24
LINC01978-201ENST00000572353 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
LINC01978-201ENST00000572353 KIF20BQ96Q89 1820 aa16.54■□□□□ 0.24
LINC01978-201ENST00000572353 RGPD8O14715 1765 aaPredicted RBP16.54■□□□□ 0.24
LINC01978-201ENST00000572353 PHF8Q9UPP1 1060 aa16.54■□□□□ 0.24
LINC01978-201ENST00000572353 NRKQ7Z2Y5 1582 aa16.54■□□□□ 0.24
LINC01978-201ENST00000572353 FBLN1P23142 703 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms