RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 DIP2AQ14689 1571 aa8.36□□□□□ -1.07
TRAPPC1-204ENST00000571947 HOXD11P31277 338 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC1-204ENST00000571947 CEBPAP49715 358 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC1-204ENST00000571947 CHD2O14647 1828 aaKnown RBP8.36□□□□□ -1.07
TRAPPC1-204ENST00000571947 ABCC11Q96J66 1382 aa8.35□□□□□ -1.07
TRAPPC1-204ENST00000571947 EVC2Q86UK5 1308 aa8.35□□□□□ -1.07
TRAPPC1-204ENST00000571947 STK26Q9P289 416 aa8.35□□□□□ -1.07
TRAPPC1-204ENST00000571947 TECPR2O15040 1411 aa8.35□□□□□ -1.07
TRAPPC1-204ENST00000571947 RGPD8O14715 1765 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC1-204ENST00000571947 PLEKHG1Q9ULL1 1385 aa8.35□□□□□ -1.07
TRAPPC1-204ENST00000571947 MED14O60244 1454 aa8.34□□□□□ -1.07
TRAPPC1-204ENST00000571947 CNGB1Q14028 1251 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC1-204ENST00000571947 KNSTRNQ9Y448 316 aa8.34□□□□□ -1.07
TRAPPC1-204ENST00000571947 ADAMTS13Q76LX8 1427 aa8.34□□□□□ -1.07
TRAPPC1-204ENST00000571947 MON2Q7Z3U7 1717 aa8.34□□□□□ -1.07
TRAPPC1-204ENST00000571947 XRN1Q8IZH2 1706 aaKnown RBP8.34□□□□□ -1.07
TRAPPC1-204ENST00000571947 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC1-204ENST00000571947 ADGRB2O60241 1585 aa8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 FAM135BQ49AJ0 1406 aa8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 AMER1Q5JTC6 1135 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 NLRP13Q86W25 1043 aa8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 POGKQ9P215 609 aa8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 MAP2P11137 1827 aaKnown RBP8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 NINLQ9Y2I6 1382 aa8.33□□□□□ -1.08
TRAPPC1-204ENST00000571947 HNRNPUQ00839 825 aaKnown RBP eCLIP8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 CC2D1BQ5T0F9 858 aaKnown RBP8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 FAM9BQ8IZU0 186 aa8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 TMC1Q8TDI8 760 aa8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 PNISRQ8TF01 805 aaKnown RBP8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 PRAM1Q96QH2 718 aa8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 RNF216Q9NWF9 866 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 TOPAZ1Q8N9V7 1692 aa8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 METP08581 1390 aa8.32□□□□□ -1.08
TRAPPC1-204ENST00000571947 LTKP29376 864 aa8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 THEMISQ8N1K5 641 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 GTF3C3Q9Y5Q9 886 aa8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 EID1Q9Y6B2 187 aa8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 ATAD2Q6PL18 1390 aa8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 ANKRD36BQ8N2N9 1353 aa8.31□□□□□ -1.08
TRAPPC1-204ENST00000571947 SHPRHQ149N8 1683 aa8.3□□□□□ -1.08
TRAPPC1-204ENST00000571947 MINK1Q8N4C8 1332 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC1-204ENST00000571947 NSD3Q9BZ95 1437 aa8.3□□□□□ -1.08
TRAPPC1-204ENST00000571947 SAFB2Q14151 953 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRAPPC1-204ENST00000571947 SLC12A5Q9H2X9 1139 aa8.3□□□□□ -1.08
TRAPPC1-204ENST00000571947 INSRP06213 1382 aa8.3□□□□□ -1.08
TRAPPC1-204ENST00000571947 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
TRAPPC1-204ENST00000571947 PPP2R1AP30153 589 aa8.29□□□□□ -1.08
TRAPPC1-204ENST00000571947 NCBP3Q53F19 620 aaKnown RBP8.29□□□□□ -1.08
TRAPPC1-204ENST00000571947 BCANQ96GW7 911 aa8.29□□□□□ -1.08
TRAPPC1-204ENST00000571947 CABP2Q9NPB3 220 aa8.29□□□□□ -1.08
TRAPPC1-204ENST00000571947 CD163L1Q9NR16 1453 aa8.29□□□□□ -1.08
TRAPPC1-204ENST00000571947 ZBED9Q6R2W3 1325 aa8.29□□□□□ -1.08
TRAPPC1-204ENST00000571947 ATP7BP35670 1465 aa8.28□□□□□ -1.08
TRAPPC1-204ENST00000571947 SRPK2P78362 688 aaKnown RBP8.28□□□□□ -1.08
TRAPPC1-204ENST00000571947 WAPLQ7Z5K2 1190 aa8.28□□□□□ -1.08
TRAPPC1-204ENST00000571947 CDK19Q9BWU1 502 aa8.28□□□□□ -1.08
TRAPPC1-204ENST00000571947 TBX22Q9Y458 520 aa8.28□□□□□ -1.08
TRAPPC1-204ENST00000571947 FMN2Q9NZ56 1722 aa8.28□□□□□ -1.08
TRAPPC1-204ENST00000571947 PTPRUQ92729 1446 aa8.28□□□□□ -1.08
TRAPPC1-204ENST00000571947 CDC42BPGQ6DT37 1551 aa8.27□□□□□ -1.09
TRAPPC1-204ENST00000571947 NSD2O96028 1365 aa8.27□□□□□ -1.09
TRAPPC1-204ENST00000571947 BLMP54132 1417 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC1-204ENST00000571947 NRKQ7Z2Y5 1582 aa8.27□□□□□ -1.09
TRAPPC1-204ENST00000571947 NALCNQ8IZF0 1738 aa8.26□□□□□ -1.09
TRAPPC1-204ENST00000571947 A0A1W2PP64 1363 aa8.26□□□□□ -1.09
TRAPPC1-204ENST00000571947 PIK3R4Q99570 1358 aa8.26□□□□□ -1.09
TRAPPC1-204ENST00000571947 ROBO2Q9HCK4 1378 aa8.26□□□□□ -1.09
TRAPPC1-204ENST00000571947 WASLO00401 505 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC1-204ENST00000571947 PTCH1Q13635 1447 aa8.26□□□□□ -1.09
TRAPPC1-204ENST00000571947 CGNL1Q0VF96 1302 aa8.26□□□□□ -1.09
TRAPPC1-204ENST00000571947 SLC26A8Q96RN1 970 aa8.25□□□□□ -1.09
TRAPPC1-204ENST00000571947 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
TRAPPC1-204ENST00000571947 HDGFL2Q7Z4V5 671 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC1-204ENST00000571947 MORC1Q86VD1 984 aa8.24□□□□□ -1.09
TRAPPC1-204ENST00000571947 POLR3AO14802 1390 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC1-204ENST00000571947 CPSF1Q10570 1443 aaKnown RBP8.23□□□□□ -1.09
TRAPPC1-204ENST00000571947 PPIP5K1Q6PFW1 1433 aa8.23□□□□□ -1.09
TRAPPC1-204ENST00000571947 ANKLE2Q86XL3 938 aa8.23□□□□□ -1.09
TRAPPC1-204ENST00000571947 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
TRAPPC1-204ENST00000571947 NWD1Q149M9 1564 aa8.22□□□□□ -1.09
TRAPPC1-204ENST00000571947 NUDT16Q96DE0 195 aaKnown RBP8.22□□□□□ -1.09
TRAPPC1-204ENST00000571947 CABP1Q9NZU7 370 aa8.22□□□□□ -1.09
TRAPPC1-204ENST00000571947 EDC4Q6P2E9 1401 aaKnown RBP8.21□□□□□ -1.09
TRAPPC1-204ENST00000571947 SMG6Q86US8 1419 aaKnown RBP8.21□□□□□ -1.09
TRAPPC1-204ENST00000571947 USP54Q70EL1 1684 aa8.21□□□□□ -1.09
TRAPPC1-204ENST00000571947 WDR43Q15061 677 aaKnown RBP eCLIP8.21□□□□□ -1.1
TRAPPC1-204ENST00000571947 NPHP4O75161 1426 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC1-204ENST00000571947 MARF1Q9Y4F3 1742 aaKnown RBP8.2□□□□□ -1.1
TRAPPC1-204ENST00000571947 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
TRAPPC1-204ENST00000571947 ADAMTS8Q9UP79 889 aa8.2□□□□□ -1.1
TRAPPC1-204ENST00000571947 CCDC61Q9Y6R9 512 aa8.2□□□□□ -1.1
TRAPPC1-204ENST00000571947 PRR36Q9H6K5 1346 aa8.2□□□□□ -1.1
TRAPPC1-204ENST00000571947 DLG5Q8TDM6 1919 aa8.19□□□□□ -1.1
TRAPPC1-204ENST00000571947 FYB1O15117 783 aa8.19□□□□□ -1.1
TRAPPC1-204ENST00000571947 ANKARQ7Z5J8 1434 aa8.19□□□□□ -1.1
TRAPPC1-204ENST00000571947 COL3A1P02461 1466 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC1-204ENST00000571947 NKTRP30414 1462 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms