RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 XRN1Q8IZH2 1706 aaKnown RBP23.67■■□□□ 1.38
RPAIN-208ENST00000571043 CDCA8Q53HL2 280 aa23.67■■□□□ 1.38
RPAIN-208ENST00000571043 FAM135BQ49AJ0 1406 aa23.65■■□□□ 1.38
RPAIN-208ENST00000571043 NWD1Q149M9 1564 aa23.64■■□□□ 1.38
RPAIN-208ENST00000571043 CPS1P31327 1500 aa23.64■■□□□ 1.37
RPAIN-208ENST00000571043 ROBO2Q9HCK4 1378 aa23.64■■□□□ 1.37
RPAIN-208ENST00000571043 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.37
RPAIN-208ENST00000571043 PRAM1Q96QH2 718 aa23.64■■□□□ 1.37
RPAIN-208ENST00000571043 MRS2Q9HD23 443 aa23.64■■□□□ 1.37
RPAIN-208ENST00000571043 CENPJQ9HC77 1338 aaPredicted RBP23.63■■□□□ 1.37
RPAIN-208ENST00000571043 CCDC184Q52MB2 194 aa23.63■■□□□ 1.37
RPAIN-208ENST00000571043 POGKQ9P215 609 aa23.63■■□□□ 1.37
RPAIN-208ENST00000571043 PTCH1Q13635 1447 aa23.62■■□□□ 1.37
RPAIN-208ENST00000571043 STRCP1A6NGW2 1772 aa23.62■■□□□ 1.37
RPAIN-208ENST00000571043 RALBP1Q15311 655 aa23.62■■□□□ 1.37
RPAIN-208ENST00000571043 PER1O15534 1290 aaPredicted RBP23.6■■□□□ 1.37
RPAIN-208ENST00000571043 PLEKHH1Q9ULM0 1364 aa23.59■■□□□ 1.37
RPAIN-208ENST00000571043 SBNO2Q9Y2G9 1366 aa23.58■■□□□ 1.37
RPAIN-208ENST00000571043 ZNF335Q9H4Z2 1342 aaPredicted RBP23.58■■□□□ 1.37
RPAIN-208ENST00000571043 NKTRP30414 1462 aaKnown RBP23.57■■□□□ 1.36
RPAIN-208ENST00000571043 SAFB2Q14151 953 aaKnown RBP eCLIP23.57■■□□□ 1.36
RPAIN-208ENST00000571043 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
RPAIN-208ENST00000571043 PROSER2Q86WR7 435 aaPredicted RBP23.55■■□□□ 1.36
RPAIN-208ENST00000571043 PANK3Q9H999 370 aa23.54■■□□□ 1.36
RPAIN-208ENST00000571043 MYBBP1AQ9BQG0 1328 aaKnown RBP23.54■■□□□ 1.36
RPAIN-208ENST00000571043 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
RPAIN-208ENST00000571043 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
RPAIN-208ENST00000571043 HNRNPUQ00839 825 aaKnown RBP eCLIP23.52■■□□□ 1.36
RPAIN-208ENST00000571043 MINK1Q8N4C8 1332 aaPredicted RBP23.52■■□□□ 1.36
RPAIN-208ENST00000571043 BRD4O60885 1362 aaPredicted RBP23.51■■□□□ 1.35
RPAIN-208ENST00000571043 NCOA3Q9Y6Q9 1424 aa23.5■■□□□ 1.35
RPAIN-208ENST00000571043 FAM9BQ8IZU0 186 aa23.49■■□□□ 1.35
RPAIN-208ENST00000571043 RBM33Q96EV2 1170 aaKnown RBP23.49■■□□□ 1.35
RPAIN-208ENST00000571043 TMEM94Q12767 1356 aa23.47■■□□□ 1.35
RPAIN-208ENST00000571043 LRRC7Q96NW7 1537 aa23.47■■□□□ 1.35
RPAIN-208ENST00000571043 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
RPAIN-208ENST00000571043 EVC2Q86UK5 1308 aa23.47■■□□□ 1.35
RPAIN-208ENST00000571043 TMC1Q8TDI8 760 aa23.46■■□□□ 1.35
RPAIN-208ENST00000571043 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
RPAIN-208ENST00000571043 XIRP1Q702N8 1843 aaKnown RBP23.46■■□□□ 1.35
RPAIN-208ENST00000571043 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
RPAIN-208ENST00000571043 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
RPAIN-208ENST00000571043 NLRP13Q86W25 1043 aa23.44■■□□□ 1.34
RPAIN-208ENST00000571043 PUS7Q96PZ0 661 aaKnown RBP23.44■■□□□ 1.34
RPAIN-208ENST00000571043 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
RPAIN-208ENST00000571043 TULP4Q9NRJ4 1543 aa23.44■■□□□ 1.34
RPAIN-208ENST00000571043 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
RPAIN-208ENST00000571043 PNISRQ8TF01 805 aaKnown RBP23.43■■□□□ 1.34
RPAIN-208ENST00000571043 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
RPAIN-208ENST00000571043 NALCNQ8IZF0 1738 aa23.43■■□□□ 1.34
RPAIN-208ENST00000571043 C14orf37Q86TY3 774 aa23.42■■□□□ 1.34
RPAIN-208ENST00000571043 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
RPAIN-208ENST00000571043 NPC1L1Q9UHC9 1359 aa23.41■■□□□ 1.34
RPAIN-208ENST00000571043 ZBED9Q6R2W3 1325 aa23.4■■□□□ 1.34
RPAIN-208ENST00000571043 SRPK2P78362 688 aaKnown RBP23.38■■□□□ 1.33
RPAIN-208ENST00000571043 CABP2Q9NPB3 220 aa23.38■■□□□ 1.33
RPAIN-208ENST00000571043 AMER1Q5JTC6 1135 aaPredicted RBP23.38■■□□□ 1.33
RPAIN-208ENST00000571043 CC2D1BQ5T0F9 858 aaKnown RBP23.38■■□□□ 1.33
RPAIN-208ENST00000571043 CDC42BPGQ6DT37 1551 aa23.37■■□□□ 1.33
RPAIN-208ENST00000571043 MSH6P52701 1360 aa23.35■■□□□ 1.33
RPAIN-208ENST00000571043 DCCP43146 1447 aa23.35■■□□□ 1.33
RPAIN-208ENST00000571043 MYOM1P52179 1685 aa23.34■■□□□ 1.33
RPAIN-208ENST00000571043 FMN2Q9NZ56 1722 aa23.34■■□□□ 1.33
RPAIN-208ENST00000571043 NUDT16Q96DE0 195 aaKnown RBP23.33■■□□□ 1.33
RPAIN-208ENST00000571043 ATAD2Q6PL18 1390 aa23.33■■□□□ 1.32
RPAIN-208ENST00000571043 ATF3P18847 181 aa23.33■■□□□ 1.32
RPAIN-208ENST00000571043 CADPS2Q86UW7 1296 aa23.33■■□□□ 1.32
RPAIN-208ENST00000571043 CCDC61Q9Y6R9 512 aa23.32■■□□□ 1.32
RPAIN-208ENST00000571043 PRR36Q9H6K5 1346 aa23.31■■□□□ 1.32
RPAIN-208ENST00000571043 RGPD8O14715 1765 aaPredicted RBP23.31■■□□□ 1.32
RPAIN-208ENST00000571043 INSRP06213 1382 aa23.3■■□□□ 1.32
RPAIN-208ENST00000571043 NUTM2FA1L443 756 aa23.3■■□□□ 1.32
RPAIN-208ENST00000571043 ANKARQ7Z5J8 1434 aa23.29■■□□□ 1.32
RPAIN-208ENST00000571043 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
RPAIN-208ENST00000571043 ATP7BP35670 1465 aa23.29■■□□□ 1.32
RPAIN-208ENST00000571043 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
RPAIN-208ENST00000571043 CABP1Q9NZU7 370 aa23.27■■□□□ 1.32
RPAIN-208ENST00000571043 SUPT16HQ9Y5B9 1047 aaKnown RBP23.27■■□□□ 1.32
RPAIN-208ENST00000571043 CARD14Q9BXL6 1004 aa23.26■■□□□ 1.31
RPAIN-208ENST00000571043 NINLQ9Y2I6 1382 aa23.26■■□□□ 1.31
RPAIN-208ENST00000571043 MST1RQ04912 1400 aa23.25■■□□□ 1.31
RPAIN-208ENST00000571043 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
RPAIN-208ENST00000571043 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
RPAIN-208ENST00000571043 ITSN1Q15811 1721 aa23.24■■□□□ 1.31
RPAIN-208ENST00000571043 TOPAZ1Q8N9V7 1692 aa23.24■■□□□ 1.31
RPAIN-208ENST00000571043 C1orf167Q5SNV9 1468 aa23.23■■□□□ 1.31
RPAIN-208ENST00000571043 PPIP5K1Q6PFW1 1433 aa23.23■■□□□ 1.31
RPAIN-208ENST00000571043 SLAIN2Q9P270 581 aa23.23■■□□□ 1.31
RPAIN-208ENST00000571043 NEFLP07196 543 aa23.22■■□□□ 1.31
RPAIN-208ENST00000571043 CERKQ8TCT0 537 aa23.22■■□□□ 1.31
RPAIN-208ENST00000571043 IQSEC2Q5JU85 1478 aa23.21■■□□□ 1.31
RPAIN-208ENST00000571043 ESCO1Q5FWF5 840 aa23.2■■□□□ 1.3
RPAIN-208ENST00000571043 ORAI2Q96SN7 254 aa23.2■■□□□ 1.3
RPAIN-208ENST00000571043 TERF2IPQ9NYB0 399 aa23.18■■□□□ 1.3
RPAIN-208ENST00000571043 PHF8Q9UPP1 1060 aa23.18■■□□□ 1.3
RPAIN-208ENST00000571043 CD163L1Q9NR16 1453 aa23.18■■□□□ 1.3
RPAIN-208ENST00000571043 PMFBP1Q8TBY8 1022 aa23.18■■□□□ 1.3
RPAIN-208ENST00000571043 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
RPAIN-208ENST00000571043 ZNF692Q9BU19 519 aaPredicted RBP23.17■■□□□ 1.3
RPAIN-208ENST00000571043 NSD3Q9BZ95 1437 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms