RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 BLMP54132 1417 aaPredicted RBP11.37□□□□□ -0.59
SMG6-205ENST00000570659 GJD4Q96KN9 370 aaPredicted RBP11.37□□□□□ -0.59
SMG6-205ENST00000570659 SPHKAPQ2M3C7 1700 aa11.37□□□□□ -0.59
SMG6-205ENST00000570659 SLIT2O94813 1529 aa11.36□□□□□ -0.59
SMG6-205ENST00000570659 HDGFP51858 240 aaKnown RBP11.36□□□□□ -0.59
SMG6-205ENST00000570659 FAM50AQ14320 339 aaKnown RBP11.35□□□□□ -0.59
SMG6-205ENST00000570659 HRCP23327 699 aa11.34□□□□□ -0.59
SMG6-205ENST00000570659 NUP155O75694 1391 aa11.32□□□□□ -0.6
SMG6-205ENST00000570659 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
SMG6-205ENST00000570659 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
SMG6-205ENST00000570659 PLCH1Q4KWH8 1693 aa11.32□□□□□ -0.6
SMG6-205ENST00000570659 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
SMG6-205ENST00000570659 FOXO3O43524 673 aa11.31□□□□□ -0.6
SMG6-205ENST00000570659 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
SMG6-205ENST00000570659 SEPT12Q8IYM1 358 aa11.31□□□□□ -0.6
SMG6-205ENST00000570659 ABCA3Q99758 1704 aa11.31□□□□□ -0.6
SMG6-205ENST00000570659 PLEKHH1Q9ULM0 1364 aa11.3□□□□□ -0.6
SMG6-205ENST00000570659 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
SMG6-205ENST00000570659 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
SMG6-205ENST00000570659 CDC42BPGQ6DT37 1551 aa11.29□□□□□ -0.6
SMG6-205ENST00000570659 PRAG1Q86YV5 1406 aa11.29□□□□□ -0.6
SMG6-205ENST00000570659 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
SMG6-205ENST00000570659 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
SMG6-205ENST00000570659 ESCO1Q5FWF5 840 aa11.28□□□□□ -0.6
SMG6-205ENST00000570659 NRAPQ86VF7 1730 aa11.28□□□□□ -0.6
SMG6-205ENST00000570659 TNS1Q9HBL0 1735 aaKnown RBP11.28□□□□□ -0.6
SMG6-205ENST00000570659 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
SMG6-205ENST00000570659 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
SMG6-205ENST00000570659 R3HDM1Q15032 1099 aaKnown RBP11.26□□□□□ -0.61
SMG6-205ENST00000570659 WAPLQ7Z5K2 1190 aa11.26□□□□□ -0.61
SMG6-205ENST00000570659 NAIPQ13075 1403 aa11.26□□□□□ -0.61
SMG6-205ENST00000570659 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
SMG6-205ENST00000570659 FMN2Q9NZ56 1722 aa11.25□□□□□ -0.61
SMG6-205ENST00000570659 SPATA31A3Q5VYP0 1347 aa11.25□□□□□ -0.61
SMG6-205ENST00000570659 PPLO60437 1756 aa11.25□□□□□ -0.61
SMG6-205ENST00000570659 KIF1BO60333 1816 aa11.24□□□□□ -0.61
SMG6-205ENST00000570659 NPHP3Q7Z494 1330 aa11.24□□□□□ -0.61
SMG6-205ENST00000570659 ROCK1Q13464 1354 aa11.24□□□□□ -0.61
SMG6-205ENST00000570659 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
SMG6-205ENST00000570659 ITGAEP38570 1179 aa11.23□□□□□ -0.61
SMG6-205ENST00000570659 VPS72Q15906 364 aa11.23□□□□□ -0.61
SMG6-205ENST00000570659 KRT27Q7Z3Y8 459 aa11.23□□□□□ -0.61
SMG6-205ENST00000570659 NWD2Q9ULI1 1742 aa11.23□□□□□ -0.61
SMG6-205ENST00000570659 HFM1A2PYH4 1435 aa11.22□□□□□ -0.61
SMG6-205ENST00000570659 FAM83GA6ND36 823 aa11.21□□□□□ -0.61
SMG6-205ENST00000570659 EZH2Q15910 746 aaKnown RBP11.21□□□□□ -0.61
SMG6-205ENST00000570659 RGPD1P0DJD0 1748 aa11.21□□□□□ -0.62
SMG6-205ENST00000570659 THSD7AQ9UPZ6 1657 aa11.2□□□□□ -0.62
SMG6-205ENST00000570659 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
SMG6-205ENST00000570659 FAM98CQ17RN3 349 aaKnown RBP11.2□□□□□ -0.62
SMG6-205ENST00000570659 IFT172Q9UG01 1749 aa11.19□□□□□ -0.62
SMG6-205ENST00000570659 FOXD1Q16676 465 aa11.19□□□□□ -0.62
SMG6-205ENST00000570659 TMEM132EQ6IEE7 984 aa11.19□□□□□ -0.62
SMG6-205ENST00000570659 STK26Q9P289 416 aa11.19□□□□□ -0.62
SMG6-205ENST00000570659 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
SMG6-205ENST00000570659 NUP188Q5SRE5 1749 aa11.18□□□□□ -0.62
SMG6-205ENST00000570659 CRYBG1Q9Y4K1 1723 aa11.18□□□□□ -0.62
SMG6-205ENST00000570659 KRT28Q7Z3Y7 464 aa11.18□□□□□ -0.62
SMG6-205ENST00000570659 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
SMG6-205ENST00000570659 TECPR2O15040 1411 aa11.18□□□□□ -0.62
SMG6-205ENST00000570659 KIF1AQ12756 1690 aa11.17□□□□□ -0.62
SMG6-205ENST00000570659 RREB1Q92766 1687 aa11.17□□□□□ -0.62
SMG6-205ENST00000570659 YY1P25490 414 aa11.17□□□□□ -0.62
SMG6-205ENST00000570659 SF3B2Q13435 895 aaKnown RBP11.17□□□□□ -0.62
SMG6-205ENST00000570659 PPARGC1BQ86YN6 1023 aaKnown RBP11.17□□□□□ -0.62
SMG6-205ENST00000570659 CAMKK2Q96RR4 588 aa11.17□□□□□ -0.62
SMG6-205ENST00000570659 CCDC9Q9Y3X0 531 aaKnown RBP11.17□□□□□ -0.62
SMG6-205ENST00000570659 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
SMG6-205ENST00000570659 DISP2A7MBM2 1401 aa11.17□□□□□ -0.62
SMG6-205ENST00000570659 BAG6P46379 1132 aa11.16□□□□□ -0.62
SMG6-205ENST00000570659 APLP2Q06481 763 aa11.16□□□□□ -0.62
SMG6-205ENST00000570659 CCDC144AA2RUR9 1427 aa11.15□□□□□ -0.62
SMG6-205ENST00000570659 ALS2Q96Q42 1657 aa11.14□□□□□ -0.63
SMG6-205ENST00000570659 LRPPRCP42704 1394 aaKnown RBP11.14□□□□□ -0.63
SMG6-205ENST00000570659 NRXN1Q9ULB1 1477 aa11.13□□□□□ -0.63
SMG6-205ENST00000570659 A0A0G2JS52 829 aa11.13□□□□□ -0.63
SMG6-205ENST00000570659 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
SMG6-205ENST00000570659 TRIM37O94972 964 aa11.13□□□□□ -0.63
SMG6-205ENST00000570659 MYT1Q01538 1121 aa11.13□□□□□ -0.63
SMG6-205ENST00000570659 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
SMG6-205ENST00000570659 PDGFDQ9GZP0 370 aaPredicted RBP11.12□□□□□ -0.63
SMG6-205ENST00000570659 SPATA31A5Q5VU36 1347 aa11.11□□□□□ -0.63
SMG6-205ENST00000570659 SPATA31A7Q8IWB4 1347 aa11.11□□□□□ -0.63
SMG6-205ENST00000570659 RRBP1Q9P2E9 1410 aaKnown RBP11.11□□□□□ -0.63
SMG6-205ENST00000570659 COL14A1Q05707 1796 aaKnown RBP11.11□□□□□ -0.63
SMG6-205ENST00000570659 LMOD2Q6P5Q4 547 aa11.11□□□□□ -0.63
SMG6-205ENST00000570659 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
SMG6-205ENST00000570659 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
SMG6-205ENST00000570659 ABCC11Q96J66 1382 aa11.11□□□□□ -0.63
SMG6-205ENST00000570659 SPATA31E1Q6ZUB1 1445 aa11.1□□□□□ -0.63
SMG6-205ENST00000570659 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
SMG6-205ENST00000570659 PRR36Q9H6K5 1346 aa11.09□□□□□ -0.63
SMG6-205ENST00000570659 YTHDC2Q9H6S0 1430 aaKnown RBP11.09□□□□□ -0.63
SMG6-205ENST00000570659 SAFB2Q14151 953 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMG6-205ENST00000570659 PTF1AQ7RTS3 328 aa11.09□□□□□ -0.63
SMG6-205ENST00000570659 PIK3C2GO75747 1445 aa11.09□□□□□ -0.63
SMG6-205ENST00000570659 CASZ1Q86V15 1759 aa11.08□□□□□ -0.64
SMG6-205ENST00000570659 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
SMG6-205ENST00000570659 RPGRIP1LQ68CZ1 1315 aa11.08□□□□□ -0.64
SMG6-205ENST00000570659 MYOM1P52179 1685 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms