RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
EDC3-218ENST00000570138 AMOTL2Q9Y2J4 779 aa12.51□□□□□ -0.41
EDC3-218ENST00000570138 SETD1BQ9UPS6 1966 aaKnown RBP12.5□□□□□ -0.41
EDC3-218ENST00000570138 TMC1Q8TDI8 760 aa12.5□□□□□ -0.41
EDC3-218ENST00000570138 SLC12A5Q9H2X9 1139 aa12.5□□□□□ -0.41
EDC3-218ENST00000570138 TECPR2O15040 1411 aa12.49□□□□□ -0.41
EDC3-218ENST00000570138 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
EDC3-218ENST00000570138 PTPRUQ92729 1446 aa12.49□□□□□ -0.41
EDC3-218ENST00000570138 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
EDC3-218ENST00000570138 SRPK2P78362 688 aaKnown RBP12.49□□□□□ -0.41
EDC3-218ENST00000570138 RALBP1Q15311 655 aa12.49□□□□□ -0.41
EDC3-218ENST00000570138 KNSTRNQ9Y448 316 aa12.49□□□□□ -0.41
EDC3-218ENST00000570138 ROBO2Q9HCK4 1378 aa12.48□□□□□ -0.41
EDC3-218ENST00000570138 CCDC184Q52MB2 194 aa12.48□□□□□ -0.41
EDC3-218ENST00000570138 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
EDC3-218ENST00000570138 CARD14Q9BXL6 1004 aa12.48□□□□□ -0.41
EDC3-218ENST00000570138 SETD1AO15047 1707 aaKnown RBP12.48□□□□□ -0.41
EDC3-218ENST00000570138 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
EDC3-218ENST00000570138 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
EDC3-218ENST00000570138 TULP4Q9NRJ4 1543 aa12.47□□□□□ -0.41
EDC3-218ENST00000570138 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
EDC3-218ENST00000570138 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
EDC3-218ENST00000570138 CC2D1BQ5T0F9 858 aaKnown RBP12.46□□□□□ -0.41
EDC3-218ENST00000570138 KTN1Q86UP2 1357 aaKnown RBP12.45□□□□□ -0.42
EDC3-218ENST00000570138 PIK3R4Q99570 1358 aa12.45□□□□□ -0.42
EDC3-218ENST00000570138 ZNF142P52746 1687 aaPredicted RBP12.45□□□□□ -0.42
EDC3-218ENST00000570138 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
EDC3-218ENST00000570138 MRS2Q9HD23 443 aa12.44□□□□□ -0.42
EDC3-218ENST00000570138 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
EDC3-218ENST00000570138 KCNA6P17658 529 aa12.43□□□□□ -0.42
EDC3-218ENST00000570138 MYT1Q01538 1121 aa12.43□□□□□ -0.42
EDC3-218ENST00000570138 CABP1Q9NZU7 370 aa12.43□□□□□ -0.42
EDC3-218ENST00000570138 DIP2AQ14689 1571 aa12.43□□□□□ -0.42
EDC3-218ENST00000570138 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
EDC3-218ENST00000570138 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
EDC3-218ENST00000570138 MYBBP1AQ9BQG0 1328 aaKnown RBP12.42□□□□□ -0.42
EDC3-218ENST00000570138 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
EDC3-218ENST00000570138 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
EDC3-218ENST00000570138 CPS1P31327 1500 aa12.42□□□□□ -0.42
EDC3-218ENST00000570138 MED1Q15648 1581 aaPredicted RBP12.41□□□□□ -0.42
EDC3-218ENST00000570138 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
EDC3-218ENST00000570138 ANKRD36BQ8N2N9 1353 aa12.41□□□□□ -0.42
EDC3-218ENST00000570138 STRCQ7RTU9 1775 aa12.4□□□□□ -0.42
EDC3-218ENST00000570138 PTCH1Q13635 1447 aa12.39□□□□□ -0.43
EDC3-218ENST00000570138 HDGFL2Q7Z4V5 671 aaPredicted RBP12.39□□□□□ -0.43
EDC3-218ENST00000570138 CCDC61Q9Y6R9 512 aa12.39□□□□□ -0.43
EDC3-218ENST00000570138 KNDC1Q76NI1 1749 aa12.39□□□□□ -0.43
EDC3-218ENST00000570138 MYOM1P52179 1685 aa12.38□□□□□ -0.43
EDC3-218ENST00000570138 PRR36Q9H6K5 1346 aa12.38□□□□□ -0.43
EDC3-218ENST00000570138 NSD3Q9BZ95 1437 aa12.38□□□□□ -0.43
EDC3-218ENST00000570138 CENPBP07199 599 aaPredicted RBP12.38□□□□□ -0.43
EDC3-218ENST00000570138 PPP2R1AP30153 589 aa12.38□□□□□ -0.43
EDC3-218ENST00000570138 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
EDC3-218ENST00000570138 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
EDC3-218ENST00000570138 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
EDC3-218ENST00000570138 PNISRQ8TF01 805 aaKnown RBP12.37□□□□□ -0.43
EDC3-218ENST00000570138 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
EDC3-218ENST00000570138 CGNL1Q0VF96 1302 aa12.37□□□□□ -0.43
EDC3-218ENST00000570138 A0A1W2PP64 1363 aa12.36□□□□□ -0.43
EDC3-218ENST00000570138 NUTM2FA1L443 756 aa12.36□□□□□ -0.43
EDC3-218ENST00000570138 MORC1Q86VD1 984 aa12.36□□□□□ -0.43
EDC3-218ENST00000570138 PLEKHG3A1L390 1219 aa12.35□□□□□ -0.43
EDC3-218ENST00000570138 PROSER2Q86WR7 435 aaPredicted RBP12.35□□□□□ -0.43
EDC3-218ENST00000570138 CD163L1Q9NR16 1453 aa12.34□□□□□ -0.43
EDC3-218ENST00000570138 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
EDC3-218ENST00000570138 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
EDC3-218ENST00000570138 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
EDC3-218ENST00000570138 PPIP5K1Q6PFW1 1433 aa12.34□□□□□ -0.43
EDC3-218ENST00000570138 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
EDC3-218ENST00000570138 FYB1O15117 783 aa12.33□□□□□ -0.44
EDC3-218ENST00000570138 CPSF1Q10570 1443 aaKnown RBP12.32□□□□□ -0.44
EDC3-218ENST00000570138 LTBP4Q8N2S1 1624 aa12.32□□□□□ -0.44
EDC3-218ENST00000570138 NSD2O96028 1365 aa12.31□□□□□ -0.44
EDC3-218ENST00000570138 ADGRB2O60241 1585 aa12.31□□□□□ -0.44
EDC3-218ENST00000570138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
EDC3-218ENST00000570138 GGNBP2Q9H3C7 697 aa12.31□□□□□ -0.44
EDC3-218ENST00000570138 DMRT2Q9Y5R5 561 aa12.31□□□□□ -0.44
EDC3-218ENST00000570138 ATP7BP35670 1465 aa12.31□□□□□ -0.44
EDC3-218ENST00000570138 ACEP12821 1306 aa12.31□□□□□ -0.44
EDC3-218ENST00000570138 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
EDC3-218ENST00000570138 C14orf37Q86TY3 774 aa12.3□□□□□ -0.44
EDC3-218ENST00000570138 CHD2O14647 1828 aaKnown RBP12.3□□□□□ -0.44
EDC3-218ENST00000570138 HNRNPUQ00839 825 aaKnown RBP eCLIP12.29□□□□□ -0.44
EDC3-218ENST00000570138 PMFBP1Q8TBY8 1022 aa12.29□□□□□ -0.44
EDC3-218ENST00000570138 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
EDC3-218ENST00000570138 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
EDC3-218ENST00000570138 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
EDC3-218ENST00000570138 NME9Q86XW9 330 aa12.27□□□□□ -0.45
EDC3-218ENST00000570138 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.45
EDC3-218ENST00000570138 ADGRL3Q9HAR2 1447 aa12.27□□□□□ -0.45
EDC3-218ENST00000570138 MTHFSP49914 203 aa12.26□□□□□ -0.45
EDC3-218ENST00000570138 C19orf44Q9H6X5 657 aa12.26□□□□□ -0.45
EDC3-218ENST00000570138 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
EDC3-218ENST00000570138 NWD1Q149M9 1564 aa12.26□□□□□ -0.45
EDC3-218ENST00000570138 USP32Q8NFA0 1604 aa12.26□□□□□ -0.45
EDC3-218ENST00000570138 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
EDC3-218ENST00000570138 CDC42BPGQ6DT37 1551 aa12.25□□□□□ -0.45
EDC3-218ENST00000570138 POLR3AO14802 1390 aaPredicted RBP12.24□□□□□ -0.45
EDC3-218ENST00000570138 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
EDC3-218ENST00000570138 TMEM94Q12767 1356 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms