RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 GJA5P36382 358 aa5.06□□□□□ -1.6
CNOT1-221ENST00000569924 PADI6Q6TGC4 694 aa5.06□□□□□ -1.6
CNOT1-221ENST00000569924 ZNF710Q8N1W2 664 aa5.06□□□□□ -1.6
CNOT1-221ENST00000569924 TTC13Q8NBP0 860 aa5.06□□□□□ -1.6
CNOT1-221ENST00000569924 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-221ENST00000569924 LILRB3O75022 631 aa5.05□□□□□ -1.6
CNOT1-221ENST00000569924 AP1G2O75843 785 aa5.05□□□□□ -1.6
CNOT1-221ENST00000569924 RFX1P22670 979 aa5.05□□□□□ -1.6
CNOT1-221ENST00000569924 ATN1P54259 1190 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-221ENST00000569924 CCDC27Q2M243 656 aa5.05□□□□□ -1.6
CNOT1-221ENST00000569924 WASHC4Q2M389 1173 aa5.05□□□□□ -1.6
CNOT1-221ENST00000569924 CFAP70Q5T0N1 1121 aa5.05□□□□□ -1.6
CNOT1-221ENST00000569924 RSBN1LQ6PCB5 846 aaPredicted RBP5.05□□□□□ -1.6
CNOT1-221ENST00000569924 RBM27Q9P2N5 1060 aaKnown RBP5.05□□□□□ -1.6
CNOT1-221ENST00000569924 KIF27Q86VH2 1401 aa5.05□□□□□ -1.6
CNOT1-221ENST00000569924 GALR2O43603 387 aaPredicted RBP5.04□□□□□ -1.6
CNOT1-221ENST00000569924 PLCG2P16885 1265 aa5.04□□□□□ -1.6
CNOT1-221ENST00000569924 SND1Q7KZF4 910 aaKnown RBP eCLIP5.04□□□□□ -1.6
CNOT1-221ENST00000569924 ADAMTS19Q8TE59 1207 aa5.04□□□□□ -1.6
CNOT1-221ENST00000569924 PPP1R12CQ9BZL4 782 aa5.04□□□□□ -1.6
CNOT1-221ENST00000569924 KDM6BO15054 1643 aa5.04□□□□□ -1.6
CNOT1-221ENST00000569924 USP17L8P0C7I0 530 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 CD46P15529 392 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 EVX2Q03828 476 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 QPCTQ16769 361 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 RTL5Q5HYW3 569 aaPredicted RBP5.03□□□□□ -1.6
CNOT1-221ENST00000569924 NUTM1Q86Y26 1132 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 RBM46Q8TBY0 533 aaKnown RBP5.03□□□□□ -1.6
CNOT1-221ENST00000569924 NDUFB9Q9Y6M9 179 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 PTPRGP23470 1445 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 TNIKQ9UKE5 1360 aa5.03□□□□□ -1.6
CNOT1-221ENST00000569924 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.02□□□□□ -1.61
CNOT1-221ENST00000569924 MOXD2PA6NHM9 499 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 ATMINO43313 823 aaPredicted RBP5.02□□□□□ -1.61
CNOT1-221ENST00000569924 CSPP1Q1MSJ5 1256 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 C6orf132Q5T0Z8 1188 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 IFFO2Q5TF58 517 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 GJD4Q96KN9 370 aaPredicted RBP5.02□□□□□ -1.61
CNOT1-221ENST00000569924 VRTNQ9H8Y1 702 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 IVNS1ABPQ9Y6Y0 642 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 CARMIL2Q6F5E8 1435 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 GLI2P10070 1586 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 CARMIL1Q5VZK9 1371 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 ABCC2Q92887 1545 aa5.02□□□□□ -1.61
CNOT1-221ENST00000569924 UHRF1BP1LA0JNW5 1464 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 PLB1Q6P1J6 1458 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 KDM4FA0A1W2PPD8 638 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 CARNS1A5YM72 827 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 NUTM2BA6NNL0 878 aaPredicted RBP5.01□□□□□ -1.61
CNOT1-221ENST00000569924 NUTM2EB1AL46 878 aaPredicted RBP5.01□□□□□ -1.61
CNOT1-221ENST00000569924 CLCN6P51797 869 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 NUTM2DQ5VT03 806 aaPredicted RBP5.01□□□□□ -1.61
CNOT1-221ENST00000569924 PRPF38BQ5VTL8 546 aaKnown RBP5.01□□□□□ -1.61
CNOT1-221ENST00000569924 NUTM2AQ8IVF1 878 aaPredicted RBP5.01□□□□□ -1.61
CNOT1-221ENST00000569924 SULF1Q8IWU6 871 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 ALG2Q9H553 416 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 PCDHB15Q9Y5E8 787 aa5.01□□□□□ -1.61
CNOT1-221ENST00000569924 TSPOAP1O95153 1857 aa5□□□□□ -1.61
CNOT1-221ENST00000569924 IQGAP2Q13576 1575 aa5□□□□□ -1.61
CNOT1-221ENST00000569924 ASXL2Q76L83 1435 aa5□□□□□ -1.61
CNOT1-221ENST00000569924 PALM3A6NDB9 673 aaPredicted RBP5□□□□□ -1.61
CNOT1-221ENST00000569924 ATG7O95352 703 aa5□□□□□ -1.61
CNOT1-221ENST00000569924 NDUFV2P19404 249 aa5□□□□□ -1.61
CNOT1-221ENST00000569924 LMOD1P29536 600 aaPredicted RBP5□□□□□ -1.61
CNOT1-221ENST00000569924 PRSS12P56730 875 aa5□□□□□ -1.61
CNOT1-221ENST00000569924 ASTLQ6HA08 431 aaPredicted RBP5□□□□□ -1.61
CNOT1-221ENST00000569924 PPRC1Q5VV67 1664 aaKnown RBP4.99□□□□□ -1.61
CNOT1-221ENST00000569924 UACAQ9BZF9 1416 aa4.99□□□□□ -1.61
CNOT1-221ENST00000569924 DISP1Q96F81 1524 aa4.99□□□□□ -1.61
CNOT1-221ENST00000569924 RCCD1A6NED2 376 aa4.99□□□□□ -1.61
CNOT1-221ENST00000569924 TMEM88BA6NKF7 163 aa4.99□□□□□ -1.61
CNOT1-221ENST00000569924 FOSBP53539 338 aa4.99□□□□□ -1.61
CNOT1-221ENST00000569924 LHX8Q68G74 356 aa4.99□□□□□ -1.61
CNOT1-221ENST00000569924 GNEQ9Y223 722 aaKnown RBP4.99□□□□□ -1.61
CNOT1-221ENST00000569924 UGGT2Q9NYU1 1516 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 KDM5BQ9UGL1 1544 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 GPR37L1O60883 481 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 CABLES1Q8TDN4 633 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 ZDHHC16Q969W1 377 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 CDCA7LQ96GN5 454 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 EYA1Q99502 592 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 ZBTB3Q9H5J0 574 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 TFIP11Q9UBB9 837 aaKnown RBP4.98□□□□□ -1.61
CNOT1-221ENST00000569924 PCDHGA4Q9Y5G9 962 aa4.98□□□□□ -1.61
CNOT1-221ENST00000569924 EPRSP07814 1512 aaKnown RBP4.97□□□□□ -1.61
CNOT1-221ENST00000569924 MAP3K4Q9Y6R4 1608 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 TEX14Q8IWB6 1497 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 RAPGEF2Q9Y4G8 1499 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 DDX11L8A8MPP1 907 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 SOX11P35716 441 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 VAC14Q08AM6 782 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 TRIM34Q9BYJ4 488 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 MYT1LQ9UL68 1186 aa4.97□□□□□ -1.61
CNOT1-221ENST00000569924 ADGRL1O94910 1474 aa4.96□□□□□ -1.62
CNOT1-221ENST00000569924 COL17A1Q9UMD9 1497 aaPredicted RBP4.96□□□□□ -1.62
CNOT1-221ENST00000569924 RBM47A0AV96 593 aaKnown RBP4.96□□□□□ -1.62
CNOT1-221ENST00000569924 SEC24BO95487 1268 aa4.96□□□□□ -1.62
CNOT1-221ENST00000569924 HMGB1P09429 215 aaKnown RBP4.96□□□□□ -1.62
CNOT1-221ENST00000569924 CTDSPL2Q05D32 466 aa4.96□□□□□ -1.62
CNOT1-221ENST00000569924 B4GALNT3Q6L9W6 998 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms