RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 FAM198AQ9UFP1 575 aa10.15□□□□□ -0.78
UBFD1-209ENST00000569919 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
UBFD1-209ENST00000569919 RBM46Q8TBY0 533 aaKnown RBP10.14□□□□□ -0.79
UBFD1-209ENST00000569919 NEO1Q92859 1461 aa10.14□□□□□ -0.79
UBFD1-209ENST00000569919 BCORL1Q5H9F3 1711 aa10.13□□□□□ -0.79
UBFD1-209ENST00000569919 ATP10BO94823 1461 aa10.13□□□□□ -0.79
UBFD1-209ENST00000569919 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
UBFD1-209ENST00000569919 ARID3CA6NKF2 412 aa10.12□□□□□ -0.79
UBFD1-209ENST00000569919 POGZQ7Z3K3 1410 aa10.11□□□□□ -0.79
UBFD1-209ENST00000569919 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
UBFD1-209ENST00000569919 MADDQ8WXG6 1647 aa10.11□□□□□ -0.79
UBFD1-209ENST00000569919 KCNK17Q96T54 332 aa10.1□□□□□ -0.79
UBFD1-209ENST00000569919 EYA1Q99502 592 aa10.1□□□□□ -0.79
UBFD1-209ENST00000569919 GOPCQ9HD26 462 aa10.1□□□□□ -0.79
UBFD1-209ENST00000569919 ABCA9Q8IUA7 1624 aa10.1□□□□□ -0.79
UBFD1-209ENST00000569919 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
UBFD1-209ENST00000569919 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
UBFD1-209ENST00000569919 RCCD1A6NED2 376 aa10.08□□□□□ -0.8
UBFD1-209ENST00000569919 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
UBFD1-209ENST00000569919 C3orf80F5H4A9 247 aa10.08□□□□□ -0.8
UBFD1-209ENST00000569919 NUDT18Q6ZVK8 323 aa10.08□□□□□ -0.8
UBFD1-209ENST00000569919 CTTNBP2Q8WZ74 1663 aa10.07□□□□□ -0.8
UBFD1-209ENST00000569919 DENND4BO75064 1496 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-209ENST00000569919 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.07□□□□□ -0.8
UBFD1-209ENST00000569919 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
UBFD1-209ENST00000569919 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
UBFD1-209ENST00000569919 TATDN2Q93075 761 aa10.07□□□□□ -0.8
UBFD1-209ENST00000569919 RIMS1Q86UR5 1692 aaKnown RBP10.06□□□□□ -0.8
UBFD1-209ENST00000569919 NBPF26B4DH59 902 aa10.06□□□□□ -0.8
UBFD1-209ENST00000569919 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
UBFD1-209ENST00000569919 AKNAQ7Z591 1439 aa10.06□□□□□ -0.8
UBFD1-209ENST00000569919 ERBB3P21860 1342 aa10.06□□□□□ -0.8
UBFD1-209ENST00000569919 FANCAO15360 1455 aa10.05□□□□□ -0.8
UBFD1-209ENST00000569919 MLECQ14165 292 aa10.05□□□□□ -0.8
UBFD1-209ENST00000569919 FHOD3Q2V2M9 1422 aa10.05□□□□□ -0.8
UBFD1-209ENST00000569919 YEATS2Q9ULM3 1422 aa10.05□□□□□ -0.8
UBFD1-209ENST00000569919 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
UBFD1-209ENST00000569919 PSEN2P49810 448 aa10.04□□□□□ -0.8
UBFD1-209ENST00000569919 SH3D19Q5HYK7 790 aa10.04□□□□□ -0.8
UBFD1-209ENST00000569919 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
UBFD1-209ENST00000569919 PCMTD1Q96MG8 357 aaPredicted RBP10.04□□□□□ -0.8
UBFD1-209ENST00000569919 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
UBFD1-209ENST00000569919 ST18O60284 1047 aa10.03□□□□□ -0.8
UBFD1-209ENST00000569919 DNAJB2P25686 324 aa10.03□□□□□ -0.8
UBFD1-209ENST00000569919 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
UBFD1-209ENST00000569919 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
UBFD1-209ENST00000569919 SMAPO00193 183 aa10.02□□□□□ -0.81
UBFD1-209ENST00000569919 MAGI2Q86UL8 1455 aa10.02□□□□□ -0.81
UBFD1-209ENST00000569919 PRXQ9BXM0 1461 aa10.02□□□□□ -0.81
UBFD1-209ENST00000569919 ARHGAP33O14559 1287 aa10.01□□□□□ -0.81
UBFD1-209ENST00000569919 SKIV2LQ15477 1246 aaKnown RBP10.01□□□□□ -0.81
UBFD1-209ENST00000569919 POTEEQ6S8J3 1075 aa10.01□□□□□ -0.81
UBFD1-209ENST00000569919 KIAA1468Q9P260 1216 aa10.01□□□□□ -0.81
UBFD1-209ENST00000569919 ARHGEF40Q8TER5 1519 aa10.01□□□□□ -0.81
UBFD1-209ENST00000569919 CEBPAP49715 358 aaPredicted RBP10□□□□□ -0.81
UBFD1-209ENST00000569919 EMP3P54852 163 aa10□□□□□ -0.81
UBFD1-209ENST00000569919 MARVELD3Q96A59 401 aa10□□□□□ -0.81
UBFD1-209ENST00000569919 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
UBFD1-209ENST00000569919 EFCAB5A4FU69 1503 aa9.99□□□□□ -0.81
UBFD1-209ENST00000569919 POLR3EQ9NVU0 708 aa9.99□□□□□ -0.81
UBFD1-209ENST00000569919 AXIN2Q9Y2T1 843 aa9.99□□□□□ -0.81
UBFD1-209ENST00000569919 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
UBFD1-209ENST00000569919 ZFYVE16Q7Z3T8 1539 aa9.98□□□□□ -0.81
UBFD1-209ENST00000569919 RAPGEF6Q8TEU7 1601 aa9.98□□□□□ -0.81
UBFD1-209ENST00000569919 MYSM1Q5VVJ2 828 aa9.98□□□□□ -0.81
UBFD1-209ENST00000569919 SULF1Q8IWU6 871 aa9.98□□□□□ -0.81
UBFD1-209ENST00000569919 TBC1D2Q9BYX2 928 aa9.98□□□□□ -0.81
UBFD1-209ENST00000569919 ZMYM4Q5VZL5 1548 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 SETD1BQ9UPS6 1966 aaKnown RBP9.97□□□□□ -0.81
UBFD1-209ENST00000569919 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 CD46P15529 392 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 DMRTA1Q5VZB9 504 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 PROCA1Q8NCQ7 364 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-209ENST00000569919 ATP1B4Q9UN42 357 aaPredicted RBP9.97□□□□□ -0.81
UBFD1-209ENST00000569919 PTPRTO14522 1441 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 ATP10AO60312 1499 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 TTC37Q6PGP7 1564 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 CFAP74Q9C0B2 1584 aa9.97□□□□□ -0.81
UBFD1-209ENST00000569919 FAM205CA6NFA0 338 aa9.96□□□□□ -0.82
UBFD1-209ENST00000569919 SLC4A5Q9BY07 1137 aa9.96□□□□□ -0.82
UBFD1-209ENST00000569919 RABGEF1Q9UJ41 708 aa9.96□□□□□ -0.82
UBFD1-209ENST00000569919 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.82
UBFD1-209ENST00000569919 SCAPERQ9BY12 1400 aa9.96□□□□□ -0.82
UBFD1-209ENST00000569919 NUP153P49790 1475 aaKnown RBP9.96□□□□□ -0.82
UBFD1-209ENST00000569919 DIXDC1Q155Q3 683 aa9.95□□□□□ -0.82
UBFD1-209ENST00000569919 EFCAB2Q5VUJ9 269 aa9.95□□□□□ -0.82
UBFD1-209ENST00000569919 FAM163AQ96GL9 167 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-209ENST00000569919 SPATA31D1Q6ZQQ2 1576 aa9.95□□□□□ -0.82
UBFD1-209ENST00000569919 PREX1Q8TCU6 1659 aa9.95□□□□□ -0.82
UBFD1-209ENST00000569919 FER1L4A9Z1Z3 1794 aa9.95□□□□□ -0.82
UBFD1-209ENST00000569919 ARHGEF12Q9NZN5 1544 aa9.94□□□□□ -0.82
UBFD1-209ENST00000569919 PBX2P40425 430 aa9.94□□□□□ -0.82
UBFD1-209ENST00000569919 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
UBFD1-209ENST00000569919 SPIRE2Q8WWL2 714 aa9.94□□□□□ -0.82
UBFD1-209ENST00000569919 ESF1Q9H501 851 aaKnown RBP9.94□□□□□ -0.82
UBFD1-209ENST00000569919 SEPT9Q9UHD8 586 aaPredicted RBP9.94□□□□□ -0.82
UBFD1-209ENST00000569919 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
UBFD1-209ENST00000569919 HECW1Q76N89 1606 aa9.93□□□□□ -0.82
UBFD1-209ENST00000569919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.93□□□□□ -0.82
UBFD1-209ENST00000569919 PLCH2O75038 1416 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms