RNA–Protein interactions for RNA: ENST00000569889.1

RBFOX1-218, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-218ENST00000569889 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
RBFOX1-218ENST00000569889 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
RBFOX1-218ENST00000569889 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
RBFOX1-218ENST00000569889 FOXO3O43524 673 aa18.25■□□□□ 0.51
RBFOX1-218ENST00000569889 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
RBFOX1-218ENST00000569889 SOS2Q07890 1332 aaPredicted RBP18.23■□□□□ 0.51
RBFOX1-218ENST00000569889 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
RBFOX1-218ENST00000569889 RBM6P78332 1123 aaKnown RBP18.22■□□□□ 0.51
RBFOX1-218ENST00000569889 USP21Q9UK80 565 aa18.22■□□□□ 0.51
RBFOX1-218ENST00000569889 ANKRD30BQ9BXX2 1392 aa18.21■□□□□ 0.51
RBFOX1-218ENST00000569889 SPATA31E1Q6ZUB1 1445 aa18.21■□□□□ 0.51
RBFOX1-218ENST00000569889 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
RBFOX1-218ENST00000569889 IFT172Q9UG01 1749 aa18.2■□□□□ 0.5
RBFOX1-218ENST00000569889 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
RBFOX1-218ENST00000569889 NPHP3Q7Z494 1330 aa18.19■□□□□ 0.5
RBFOX1-218ENST00000569889 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
RBFOX1-218ENST00000569889 RGPD8O14715 1765 aaPredicted RBP18.16■□□□□ 0.5
RBFOX1-218ENST00000569889 RGS12O14924 1447 aa18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 C14orf93Q9H972 538 aaKnown RBP18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 POGKQ9P215 609 aa18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 TRPC5Q9UL62 973 aaPredicted RBP18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 CDC42BPGQ6DT37 1551 aa18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 ABCC11Q96J66 1382 aa18.15■□□□□ 0.5
RBFOX1-218ENST00000569889 LAMC1P11047 1609 aa18.14■□□□□ 0.49
RBFOX1-218ENST00000569889 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
RBFOX1-218ENST00000569889 KRT28Q7Z3Y7 464 aa18.14■□□□□ 0.49
RBFOX1-218ENST00000569889 RAB3GAP2Q9H2M9 1393 aa18.14■□□□□ 0.49
RBFOX1-218ENST00000569889 PIK3C2GO75747 1445 aa18.14■□□□□ 0.49
RBFOX1-218ENST00000569889 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
RBFOX1-218ENST00000569889 DHX57Q6P158 1386 aaKnown RBP18.13■□□□□ 0.49
RBFOX1-218ENST00000569889 PRAG1Q86YV5 1406 aa18.13■□□□□ 0.49
RBFOX1-218ENST00000569889 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
RBFOX1-218ENST00000569889 KNDC1Q76NI1 1749 aa18.12■□□□□ 0.49
RBFOX1-218ENST00000569889 PXDNQ92626 1479 aa18.11■□□□□ 0.49
RBFOX1-218ENST00000569889 FMN2Q9NZ56 1722 aa18.1■□□□□ 0.49
RBFOX1-218ENST00000569889 TECPR2O15040 1411 aa18.1■□□□□ 0.49
RBFOX1-218ENST00000569889 PMFBP1Q8TBY8 1022 aa18.1■□□□□ 0.49
RBFOX1-218ENST00000569889 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
RBFOX1-218ENST00000569889 PHF8Q9UPP1 1060 aa18.1■□□□□ 0.49
RBFOX1-218ENST00000569889 TRAK1Q9UPV9 953 aa18.1■□□□□ 0.49
RBFOX1-218ENST00000569889 FNBP4Q8N3X1 1017 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-218ENST00000569889 HIRIP3Q9BW71 556 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-218ENST00000569889 COL22A1Q8NFW1 1626 aaPredicted RBP18.09■□□□□ 0.49
RBFOX1-218ENST00000569889 PSME1Q06323 249 aa18.08■□□□□ 0.48
RBFOX1-218ENST00000569889 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.48
RBFOX1-218ENST00000569889 MARF1Q9Y4F3 1742 aaKnown RBP18.08■□□□□ 0.48
RBFOX1-218ENST00000569889 SPATA31A3Q5VYP0 1347 aa18.07■□□□□ 0.48
RBFOX1-218ENST00000569889 MINK1Q8N4C8 1332 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-218ENST00000569889 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-218ENST00000569889 CCDC9Q9Y3X0 531 aaKnown RBP18.06■□□□□ 0.48
RBFOX1-218ENST00000569889 MYOM2P54296 1465 aa18.06■□□□□ 0.48
RBFOX1-218ENST00000569889 SIRT1Q96EB6 747 aa18.05■□□□□ 0.48
RBFOX1-218ENST00000569889 ATRNO75882 1429 aa18.05■□□□□ 0.48
RBFOX1-218ENST00000569889 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
RBFOX1-218ENST00000569889 KIF1AQ12756 1690 aa18.04■□□□□ 0.48
RBFOX1-218ENST00000569889 GJD4Q96KN9 370 aaPredicted RBP18.04■□□□□ 0.48
RBFOX1-218ENST00000569889 BCL9LQ86UU0 1499 aa18.02■□□□□ 0.48
RBFOX1-218ENST00000569889 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
RBFOX1-218ENST00000569889 NRXN1Q9ULB1 1477 aa18.01■□□□□ 0.47
RBFOX1-218ENST00000569889 A0A0G2JS52 829 aa17.99■□□□□ 0.47
RBFOX1-218ENST00000569889 PAK3O75914 559 aaPredicted RBP17.99■□□□□ 0.47
RBFOX1-218ENST00000569889 MYT1Q01538 1121 aa17.99■□□□□ 0.47
RBFOX1-218ENST00000569889 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
RBFOX1-218ENST00000569889 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
RBFOX1-218ENST00000569889 USP32Q8NFA0 1604 aa17.95■□□□□ 0.46
RBFOX1-218ENST00000569889 RALGAPBQ86X10 1494 aa17.95■□□□□ 0.46
RBFOX1-218ENST00000569889 BRWD3Q6RI45 1802 aa17.94■□□□□ 0.46
RBFOX1-218ENST00000569889 FAM83GA6ND36 823 aa17.94■□□□□ 0.46
RBFOX1-218ENST00000569889 WASLO00401 505 aaPredicted RBP17.94■□□□□ 0.46
RBFOX1-218ENST00000569889 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
RBFOX1-218ENST00000569889 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
RBFOX1-218ENST00000569889 DLC1Q96QB1 1528 aa17.93■□□□□ 0.46
RBFOX1-218ENST00000569889 SBNO1A3KN83 1393 aa17.93■□□□□ 0.46
RBFOX1-218ENST00000569889 GPRASP1Q5JY77 1395 aa17.93■□□□□ 0.46
RBFOX1-218ENST00000569889 SLIT2O94813 1529 aa17.93■□□□□ 0.46
RBFOX1-218ENST00000569889 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
RBFOX1-218ENST00000569889 ADGRB1O14514 1584 aa17.92■□□□□ 0.46
RBFOX1-218ENST00000569889 GLI3P10071 1580 aa17.92■□□□□ 0.46
RBFOX1-218ENST00000569889 ZRANB1Q9UGI0 708 aa17.92■□□□□ 0.46
RBFOX1-218ENST00000569889 PLCH1Q4KWH8 1693 aa17.91■□□□□ 0.46
RBFOX1-218ENST00000569889 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.91■□□□□ 0.46
RBFOX1-218ENST00000569889 ANKARQ7Z5J8 1434 aa17.9■□□□□ 0.46
RBFOX1-218ENST00000569889 VPS72Q15906 364 aa17.9■□□□□ 0.46
RBFOX1-218ENST00000569889 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
RBFOX1-218ENST00000569889 BTG4Q9NY30 223 aa17.9■□□□□ 0.46
RBFOX1-218ENST00000569889 SF3B2Q13435 895 aaKnown RBP17.89■□□□□ 0.45
RBFOX1-218ENST00000569889 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
RBFOX1-218ENST00000569889 ABCA3Q99758 1704 aa17.89■□□□□ 0.45
RBFOX1-218ENST00000569889 FAM98CQ17RN3 349 aaKnown RBP17.88■□□□□ 0.45
RBFOX1-218ENST00000569889 DEFB132Q7Z7B7 95 aa17.88■□□□□ 0.45
RBFOX1-218ENST00000569889 CDK19Q9BWU1 502 aa17.88■□□□□ 0.45
RBFOX1-218ENST00000569889 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
RBFOX1-218ENST00000569889 CCDC125Q86Z20 511 aa17.87■□□□□ 0.45
RBFOX1-218ENST00000569889 ADGRB2O60241 1585 aa17.87■□□□□ 0.45
RBFOX1-218ENST00000569889 SRCAPQ6ZRS2 3230 aa17.86■□□□□ 0.45
RBFOX1-218ENST00000569889 HRCP23327 699 aa17.86■□□□□ 0.45
RBFOX1-218ENST00000569889 KRT27Q7Z3Y8 459 aa17.86■□□□□ 0.45
RBFOX1-218ENST00000569889 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms