RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 IQGAP1P46940 1657 aa7.27□□□□□ -1.25
SF3B3-213ENST00000569687 SETBP1Q9Y6X0 1596 aa7.26□□□□□ -1.25
SF3B3-213ENST00000569687 IDI1Q13907 227 aa7.26□□□□□ -1.25
SF3B3-213ENST00000569687 KIF1BO60333 1816 aa7.26□□□□□ -1.25
SF3B3-213ENST00000569687 CLTCQ00610 1675 aaKnown RBP7.25□□□□□ -1.25
SF3B3-213ENST00000569687 UGGT1Q9NYU2 1555 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 SPDYE2BA6NHP3 402 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 SPDYE6P0CI01 402 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 SPDYE2Q495Y8 402 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 KNSTRNQ9Y448 316 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 PIK3C2GO75747 1445 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 SMG6Q86US8 1419 aaKnown RBP7.25□□□□□ -1.25
SF3B3-213ENST00000569687 PREX1Q8TCU6 1659 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 SYNMO15061 1565 aa7.25□□□□□ -1.25
SF3B3-213ENST00000569687 IFT172Q9UG01 1749 aa7.24□□□□□ -1.25
SF3B3-213ENST00000569687 PIK3C2BO00750 1634 aa7.24□□□□□ -1.25
SF3B3-213ENST00000569687 PDE3BQ13370 1112 aa7.24□□□□□ -1.25
SF3B3-213ENST00000569687 RNF123Q5XPI4 1314 aa7.24□□□□□ -1.25
SF3B3-213ENST00000569687 ERVK-7P63135 1459 aa7.24□□□□□ -1.25
SF3B3-213ENST00000569687 MLECQ14165 292 aa7.23□□□□□ -1.25
SF3B3-213ENST00000569687 SPATA31D1Q6ZQQ2 1576 aa7.23□□□□□ -1.25
SF3B3-213ENST00000569687 CENPJQ9HC77 1338 aaPredicted RBP7.23□□□□□ -1.25
SF3B3-213ENST00000569687 MROH2AA6NES4 1674 aa7.22□□□□□ -1.25
SF3B3-213ENST00000569687 ADGRB1O14514 1584 aa7.22□□□□□ -1.25
SF3B3-213ENST00000569687 PPP2R1AP30153 589 aa7.22□□□□□ -1.25
SF3B3-213ENST00000569687 CC2D1BQ5T0F9 858 aaKnown RBP7.22□□□□□ -1.25
SF3B3-213ENST00000569687 ZBTB47Q9UFB7 747 aaPredicted RBP7.22□□□□□ -1.25
SF3B3-213ENST00000569687 NUDCQ9Y266 331 aa7.22□□□□□ -1.25
SF3B3-213ENST00000569687 PLEKHG5O94827 1062 aa7.21□□□□□ -1.26
SF3B3-213ENST00000569687 C1QBPQ07021 282 aaKnown RBP7.21□□□□□ -1.26
SF3B3-213ENST00000569687 RNF25Q96BH1 459 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-213ENST00000569687 ESF1Q9H501 851 aaKnown RBP7.21□□□□□ -1.26
SF3B3-213ENST00000569687 ZMYM3Q14202 1370 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 PPLO60437 1756 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 MYO3AQ8NEV4 1616 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 NKX1-1Q15270 411 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-213ENST00000569687 FBXO31Q5XUX0 539 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-213ENST00000569687 CARD14Q9BXL6 1004 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 PPP4R2Q9NY27 417 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 TRAK1Q9UPV9 953 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 NEXMIFQ5QGS0 1516 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 ASXL1Q8IXJ9 1541 aa7.2□□□□□ -1.26
SF3B3-213ENST00000569687 FER1L4A9Z1Z3 1794 aa7.19□□□□□ -1.26
SF3B3-213ENST00000569687 CNGB1Q14028 1251 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-213ENST00000569687 TMEM132EQ6IEE7 984 aa7.19□□□□□ -1.26
SF3B3-213ENST00000569687 BLMP54132 1417 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-213ENST00000569687 GTPBP6O43824 516 aaPredicted RBP7.18□□□□□ -1.26
SF3B3-213ENST00000569687 NGEFQ8N5V2 710 aa7.18□□□□□ -1.26
SF3B3-213ENST00000569687 SIRT1Q96EB6 747 aa7.18□□□□□ -1.26
SF3B3-213ENST00000569687 ADAMTS8Q9UP79 889 aa7.18□□□□□ -1.26
SF3B3-213ENST00000569687 TMEM131LA2VDJ0 1609 aa7.18□□□□□ -1.26
SF3B3-213ENST00000569687 EVC2Q86UK5 1308 aa7.18□□□□□ -1.26
SF3B3-213ENST00000569687 CFAP65Q6ZU64 1925 aaKnown RBP7.17□□□□□ -1.26
SF3B3-213ENST00000569687 C3P01024 1663 aa7.17□□□□□ -1.26
SF3B3-213ENST00000569687 KDM5AP29375 1690 aaKnown RBP7.17□□□□□ -1.26
SF3B3-213ENST00000569687 TNRQ92752 1358 aa7.17□□□□□ -1.26
SF3B3-213ENST00000569687 ADAMTSL3P82987 1691 aa7.16□□□□□ -1.26
SF3B3-213ENST00000569687 HDGFP51858 240 aaKnown RBP7.16□□□□□ -1.26
SF3B3-213ENST00000569687 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.16□□□□□ -1.26
SF3B3-213ENST00000569687 SLC12A5Q9H2X9 1139 aa7.16□□□□□ -1.26
SF3B3-213ENST00000569687 NINLQ9Y2I6 1382 aa7.16□□□□□ -1.26
SF3B3-213ENST00000569687 GSE1Q14687 1217 aa7.15□□□□□ -1.26
SF3B3-213ENST00000569687 POLR3AO14802 1390 aaPredicted RBP7.15□□□□□ -1.26
SF3B3-213ENST00000569687 A2ML1A8K2U0 1454 aa7.15□□□□□ -1.27
SF3B3-213ENST00000569687 NLRP1Q9C000 1473 aa7.15□□□□□ -1.27
SF3B3-213ENST00000569687 RIMS1Q86UR5 1692 aaKnown RBP7.15□□□□□ -1.27
SF3B3-213ENST00000569687 NSD2O96028 1365 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 DSG3P32926 999 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 MYOM1P52179 1685 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 CGNL1Q0VF96 1302 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 WDR43Q15061 677 aaKnown RBP eCLIP7.14□□□□□ -1.27
SF3B3-213ENST00000569687 NUTM2DQ5VT03 806 aaPredicted RBP7.14□□□□□ -1.27
SF3B3-213ENST00000569687 TRMT2AQ8IZ69 625 aaKnown RBP7.14□□□□□ -1.27
SF3B3-213ENST00000569687 ABCC11Q96J66 1382 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 ZNF521Q96K83 1311 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 ARXQ96QS3 562 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 YTHDC2Q9H6S0 1430 aaKnown RBP7.14□□□□□ -1.27
SF3B3-213ENST00000569687 MYO5BQ9ULV0 1848 aa7.14□□□□□ -1.27
SF3B3-213ENST00000569687 ANKRD36BQ8N2N9 1353 aa7.13□□□□□ -1.27
SF3B3-213ENST00000569687 RIOK3O14730 519 aaKnown RBP7.13□□□□□ -1.27
SF3B3-213ENST00000569687 CEBPAP49715 358 aaPredicted RBP7.13□□□□□ -1.27
SF3B3-213ENST00000569687 TMEM132AQ24JP5 1023 aa7.13□□□□□ -1.27
SF3B3-213ENST00000569687 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
SF3B3-213ENST00000569687 MORC1Q86VD1 984 aa7.13□□□□□ -1.27
SF3B3-213ENST00000569687 RCAN3Q9UKA8 241 aa7.13□□□□□ -1.27
SF3B3-213ENST00000569687 UBR1Q8IWV7 1749 aa7.13□□□□□ -1.27
SF3B3-213ENST00000569687 PTPRMP28827 1452 aa7.12□□□□□ -1.27
SF3B3-213ENST00000569687 RIMS2Q9UQ26 1411 aa7.12□□□□□ -1.27
SF3B3-213ENST00000569687 ATAD2Q6PL18 1390 aa7.12□□□□□ -1.27
SF3B3-213ENST00000569687 IRX6P78412 446 aaPredicted RBP7.12□□□□□ -1.27
SF3B3-213ENST00000569687 PRAM1Q96QH2 718 aa7.12□□□□□ -1.27
SF3B3-213ENST00000569687 POGKQ9P215 609 aa7.12□□□□□ -1.27
SF3B3-213ENST00000569687 STK26Q9P289 416 aa7.12□□□□□ -1.27
SF3B3-213ENST00000569687 ALKQ9UM73 1620 aa7.12□□□□□ -1.27
SF3B3-213ENST00000569687 DLC1Q96QB1 1528 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 NSD3Q9BZ95 1437 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 RRP1P56182 461 aaKnown RBP7.11□□□□□ -1.27
SF3B3-213ENST00000569687 SLFN5Q08AF3 891 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 CDCA7LQ96GN5 454 aa7.11□□□□□ -1.27
SF3B3-213ENST00000569687 CABP2Q9NPB3 220 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms