RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 TTC24A2A3L6 582 aaPredicted RBP10.18□□□□□ -0.78
TNRC6A-218ENST00000569634 IRF6O14896 467 aa10.18□□□□□ -0.78
TNRC6A-218ENST00000569634 MMP16P51512 607 aa10.18□□□□□ -0.78
TNRC6A-218ENST00000569634 USB1Q9BQ65 265 aaKnown RBP10.18□□□□□ -0.78
TNRC6A-218ENST00000569634 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
TNRC6A-218ENST00000569634 AXIN1O15169 862 aa10.17□□□□□ -0.78
TNRC6A-218ENST00000569634 SMCPP49901 116 aaPredicted RBP10.17□□□□□ -0.78
TNRC6A-218ENST00000569634 WNT7AO00755 349 aa10.16□□□□□ -0.78
TNRC6A-218ENST00000569634 KRI1Q8N9T8 703 aaKnown RBP10.16□□□□□ -0.78
TNRC6A-218ENST00000569634 CLCN1P35523 988 aa10.15□□□□□ -0.78
TNRC6A-218ENST00000569634 SNIP1Q8TAD8 396 aaKnown RBP10.15□□□□□ -0.78
TNRC6A-218ENST00000569634 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
TNRC6A-218ENST00000569634 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
TNRC6A-218ENST00000569634 TRIM32Q13049 653 aa10.12□□□□□ -0.79
TNRC6A-218ENST00000569634 GPCPD1Q9NPB8 672 aa10.12□□□□□ -0.79
TNRC6A-218ENST00000569634 DXOO77932 396 aaKnown RBP10.11□□□□□ -0.79
TNRC6A-218ENST00000569634 PRDM9Q9NQV7 894 aa10.11□□□□□ -0.79
TNRC6A-218ENST00000569634 ST8SIA5O15466 376 aa10.1□□□□□ -0.79
TNRC6A-218ENST00000569634 WNT7BP56706 349 aa10.1□□□□□ -0.79
TNRC6A-218ENST00000569634 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
TNRC6A-218ENST00000569634 NUTM1Q86Y26 1132 aa10.1□□□□□ -0.79
TNRC6A-218ENST00000569634 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
TNRC6A-218ENST00000569634 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
TNRC6A-218ENST00000569634 TREML4Q6UXN2 200 aa10.08□□□□□ -0.8
TNRC6A-218ENST00000569634 SENP2Q9HC62 589 aa10.08□□□□□ -0.8
TNRC6A-218ENST00000569634 POTECB2RU33 542 aa10.07□□□□□ -0.8
TNRC6A-218ENST00000569634 HOXA2O43364 376 aa10.07□□□□□ -0.8
TNRC6A-218ENST00000569634 CCDC24Q8N4L8 307 aa10.06□□□□□ -0.8
TNRC6A-218ENST00000569634 RETREG3Q86VR2 466 aa10.05□□□□□ -0.8
TNRC6A-218ENST00000569634 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
TNRC6A-218ENST00000569634 JUNDP17535 347 aa10.04□□□□□ -0.8
TNRC6A-218ENST00000569634 KIFC2Q96AC6 838 aa10.04□□□□□ -0.8
TNRC6A-218ENST00000569634 MRGPRX2Q96LB1 330 aa10.04□□□□□ -0.8
TNRC6A-218ENST00000569634 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
TNRC6A-218ENST00000569634 SMPD1P17405 629 aa10.02□□□□□ -0.81
TNRC6A-218ENST00000569634 RC3H1Q5TC82 1133 aaKnown RBP10.02□□□□□ -0.81
TNRC6A-218ENST00000569634 GMPR2Q9P2T1 348 aaKnown RBP10.01□□□□□ -0.81
TNRC6A-218ENST00000569634 WFS1O76024 890 aa10□□□□□ -0.81
TNRC6A-218ENST00000569634 DIXDC1Q155Q3 683 aa10□□□□□ -0.81
TNRC6A-218ENST00000569634 SPDYE5A6NIY4 337 aa9.99□□□□□ -0.81
TNRC6A-218ENST00000569634 NUDT12Q9BQG2 462 aa9.99□□□□□ -0.81
TNRC6A-218ENST00000569634 ATP13A2Q9NQ11 1180 aa9.99□□□□□ -0.81
TNRC6A-218ENST00000569634 FDX1P10109 184 aa9.98□□□□□ -0.81
TNRC6A-218ENST00000569634 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.97□□□□□ -0.81
TNRC6A-218ENST00000569634 C6orf229H3BNL8 230 aa9.96□□□□□ -0.82
TNRC6A-218ENST00000569634 MS4A1P11836 297 aa9.96□□□□□ -0.82
TNRC6A-218ENST00000569634 INSM1Q01101 510 aaPredicted RBP9.96□□□□□ -0.82
TNRC6A-218ENST00000569634 DACH1Q9UI36 760 aa9.96□□□□□ -0.82
TNRC6A-218ENST00000569634 J3QL48 77 aa9.95□□□□□ -0.82
TNRC6A-218ENST00000569634 SSTR3P32745 418 aaPredicted RBP9.95□□□□□ -0.82
TNRC6A-218ENST00000569634 EHBP1Q8NDI1 1231 aa9.95□□□□□ -0.82
TNRC6A-218ENST00000569634 TRIM47Q96LD4 638 aa9.95□□□□□ -0.82
TNRC6A-218ENST00000569634 CCNYL3P0C7X3 344 aa9.94□□□□□ -0.82
TNRC6A-218ENST00000569634 GJA5P36382 358 aa9.94□□□□□ -0.82
TNRC6A-218ENST00000569634 PTPRNQ16849 979 aa9.94□□□□□ -0.82
TNRC6A-218ENST00000569634 WASF2Q9Y6W5 498 aa9.94□□□□□ -0.82
TNRC6A-218ENST00000569634 PLEKHG3A1L390 1219 aa9.93□□□□□ -0.82
TNRC6A-218ENST00000569634 ALDH1A1P00352 501 aa9.93□□□□□ -0.82
TNRC6A-218ENST00000569634 LCE2AQ5TA79 106 aaPredicted RBP9.93□□□□□ -0.82
TNRC6A-218ENST00000569634 DESI1Q6ICB0 168 aa9.93□□□□□ -0.82
TNRC6A-218ENST00000569634 SKOR1P84550 965 aa9.92□□□□□ -0.82
TNRC6A-218ENST00000569634 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
TNRC6A-218ENST00000569634 HLA-CQ95604 372 aa9.92□□□□□ -0.82
TNRC6A-218ENST00000569634 SLC16A10Q8TF71 515 aa9.91□□□□□ -0.82
TNRC6A-218ENST00000569634 HPS1Q92902 700 aa9.91□□□□□ -0.82
TNRC6A-218ENST00000569634 EVA1BQ9NVM1 165 aa9.91□□□□□ -0.82
TNRC6A-218ENST00000569634 WIPF1O43516 503 aa9.9□□□□□ -0.82
TNRC6A-218ENST00000569634 GUCA2AQ02747 115 aa9.9□□□□□ -0.82
TNRC6A-218ENST00000569634 AMHR2Q16671 573 aa9.9□□□□□ -0.82
TNRC6A-218ENST00000569634 BARGINQ6ZT62 677 aa9.9□□□□□ -0.82
TNRC6A-218ENST00000569634 SPIRE2Q8WWL2 714 aa9.9□□□□□ -0.82
TNRC6A-218ENST00000569634 STK17AQ9UEE5 414 aa9.9□□□□□ -0.82
TNRC6A-218ENST00000569634 MTMR2Q13614 643 aa9.89□□□□□ -0.83
TNRC6A-218ENST00000569634 MPNDQ8N594 471 aa9.89□□□□□ -0.83
TNRC6A-218ENST00000569634 SYMPKQ92797 1274 aaKnown RBP9.89□□□□□ -0.83
TNRC6A-218ENST00000569634 TERTO14746 1132 aaKnown RBP9.88□□□□□ -0.83
TNRC6A-218ENST00000569634 SIAH2O43255 324 aa9.88□□□□□ -0.83
TNRC6A-218ENST00000569634 VARSP26640 1264 aaKnown RBP9.88□□□□□ -0.83
TNRC6A-218ENST00000569634 NFX1Q12986 1120 aaKnown RBP9.88□□□□□ -0.83
TNRC6A-218ENST00000569634 NPAS3Q8IXF0 933 aa9.88□□□□□ -0.83
TNRC6A-218ENST00000569634 ZMYND10O75800 440 aa9.87□□□□□ -0.83
TNRC6A-218ENST00000569634 KCNH2Q12809 1159 aa9.87□□□□□ -0.83
TNRC6A-218ENST00000569634 UNC93B1Q9H1C4 597 aa9.86□□□□□ -0.83
TNRC6A-218ENST00000569634 PCDHGC3Q9UN70 934 aa9.86□□□□□ -0.83
TNRC6A-218ENST00000569634 FAM181BA6NEQ2 426 aa9.85□□□□□ -0.83
TNRC6A-218ENST00000569634 CAPN5O15484 640 aaPredicted RBP9.85□□□□□ -0.83
TNRC6A-218ENST00000569634 SH3BP2P78314 561 aa9.85□□□□□ -0.83
TNRC6A-218ENST00000569634 PRR7Q8TB68 274 aa9.85□□□□□ -0.83
TNRC6A-218ENST00000569634 SNRPBP14678 240 aaKnown RBP9.84□□□□□ -0.83
TNRC6A-218ENST00000569634 PTCRAQ6ISU1 281 aaPredicted RBP9.84□□□□□ -0.83
TNRC6A-218ENST00000569634 GIGYF2Q6Y7W6 1299 aaKnown RBP9.83□□□□□ -0.84
TNRC6A-218ENST00000569634 MOXD2PA6NHM9 499 aa9.82□□□□□ -0.84
TNRC6A-218ENST00000569634 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
TNRC6A-218ENST00000569634 PRPF38BQ5VTL8 546 aaKnown RBP9.81□□□□□ -0.84
TNRC6A-218ENST00000569634 ZNF511Q8NB15 262 aa9.81□□□□□ -0.84
TNRC6A-218ENST00000569634 NXF1Q9UBU9 619 aaKnown RBP9.81□□□□□ -0.84
TNRC6A-218ENST00000569634 NDUFV2P19404 249 aa9.8□□□□□ -0.84
TNRC6A-218ENST00000569634 SCARF1Q14162 830 aa9.8□□□□□ -0.84
TNRC6A-218ENST00000569634 FAM174AQ8TBP5 190 aa9.8□□□□□ -0.84
TNRC6A-218ENST00000569634 BAP1Q92560 729 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms