RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 POGKQ9P215 609 aa28.5■■■□□ 2.15
SPSB3-211ENST00000569380 KCNA6P17658 529 aa28.48■■■□□ 2.15
SPSB3-211ENST00000569380 MINK1Q8N4C8 1332 aaPredicted RBP28.48■■■□□ 2.15
SPSB3-211ENST00000569380 DDX10Q13206 875 aaKnown RBP28.47■■■□□ 2.15
SPSB3-211ENST00000569380 UBAP1LF5GYI3 381 aa28.46■■■□□ 2.15
SPSB3-211ENST00000569380 TMF1P82094 1093 aa28.45■■■□□ 2.15
SPSB3-211ENST00000569380 PIK3R4Q99570 1358 aa28.45■■■□□ 2.14
SPSB3-211ENST00000569380 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
SPSB3-211ENST00000569380 TULP4Q9NRJ4 1543 aa28.44■■■□□ 2.14
SPSB3-211ENST00000569380 SBNO2Q9Y2G9 1366 aa28.43■■■□□ 2.14
SPSB3-211ENST00000569380 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
SPSB3-211ENST00000569380 RBM33Q96EV2 1170 aaKnown RBP28.42■■■□□ 2.14
SPSB3-211ENST00000569380 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.42■■■□□ 2.14
SPSB3-211ENST00000569380 PTCH1Q13635 1447 aa28.39■■■□□ 2.14
SPSB3-211ENST00000569380 SIRT1Q96EB6 747 aa28.39■■■□□ 2.13
SPSB3-211ENST00000569380 NWD1Q149M9 1564 aa28.38■■■□□ 2.13
SPSB3-211ENST00000569380 DIEXFQ68CQ4 756 aaKnown RBP28.36■■■□□ 2.13
SPSB3-211ENST00000569380 CABP2Q9NPB3 220 aa28.34■■■□□ 2.13
SPSB3-211ENST00000569380 EVC2Q86UK5 1308 aa28.33■■■□□ 2.12
SPSB3-211ENST00000569380 MYOM1P52179 1685 aa28.31■■■□□ 2.12
SPSB3-211ENST00000569380 PIP4K2BP78356 416 aa28.3■■■□□ 2.12
SPSB3-211ENST00000569380 CDK19Q9BWU1 502 aa28.3■■■□□ 2.12
SPSB3-211ENST00000569380 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
SPSB3-211ENST00000569380 SRPK2P78362 688 aaKnown RBP28.29■■■□□ 2.12
SPSB3-211ENST00000569380 SCAF1Q9H7N4 1312 aaKnown RBP28.28■■■□□ 2.12
SPSB3-211ENST00000569380 TOM1O60784 492 aa28.28■■■□□ 2.12
SPSB3-211ENST00000569380 NALCNQ8IZF0 1738 aa28.28■■■□□ 2.12
SPSB3-211ENST00000569380 ADGRB2O60241 1585 aa28.26■■■□□ 2.11
SPSB3-211ENST00000569380 WASLO00401 505 aaPredicted RBP28.26■■■□□ 2.11
SPSB3-211ENST00000569380 CDCA8Q53HL2 280 aa28.26■■■□□ 2.11
SPSB3-211ENST00000569380 TMEM94Q12767 1356 aa28.25■■■□□ 2.11
SPSB3-211ENST00000569380 SLC24A1O60721 1099 aa28.25■■■□□ 2.11
SPSB3-211ENST00000569380 PROSER2Q86WR7 435 aaPredicted RBP28.25■■■□□ 2.11
SPSB3-211ENST00000569380 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
SPSB3-211ENST00000569380 NUTM2FA1L443 756 aa28.23■■■□□ 2.11
SPSB3-211ENST00000569380 SLC12A5Q9H2X9 1139 aa28.21■■■□□ 2.11
SPSB3-211ENST00000569380 TMC1Q8TDI8 760 aa28.2■■■□□ 2.11
SPSB3-211ENST00000569380 PRR36Q9H6K5 1346 aa28.19■■■□□ 2.1
SPSB3-211ENST00000569380 PANK3Q9H999 370 aa28.19■■■□□ 2.1
SPSB3-211ENST00000569380 ADGRL3Q9HAR2 1447 aa28.17■■■□□ 2.1
SPSB3-211ENST00000569380 HSPA1LP34931 641 aa28.16■■■□□ 2.1
SPSB3-211ENST00000569380 C14orf37Q86TY3 774 aa28.16■■■□□ 2.1
SPSB3-211ENST00000569380 USP32Q8NFA0 1604 aa28.16■■■□□ 2.1
SPSB3-211ENST00000569380 NUDT16Q96DE0 195 aaKnown RBP28.15■■■□□ 2.1
SPSB3-211ENST00000569380 PUS7Q96PZ0 661 aaKnown RBP28.15■■■□□ 2.1
SPSB3-211ENST00000569380 RGPD8O14715 1765 aaPredicted RBP28.15■■■□□ 2.1
SPSB3-211ENST00000569380 ATP7BP35670 1465 aa28.15■■■□□ 2.1
SPSB3-211ENST00000569380 ATAD2Q6PL18 1390 aa28.13■■■□□ 2.09
SPSB3-211ENST00000569380 FMN2Q9NZ56 1722 aa28.13■■■□□ 2.09
SPSB3-211ENST00000569380 CNGB1Q14028 1251 aaPredicted RBP28.13■■■□□ 2.09
SPSB3-211ENST00000569380 CDC42BPGQ6DT37 1551 aa28.12■■■□□ 2.09
SPSB3-211ENST00000569380 CABP1Q9NZU7 370 aa28.11■■■□□ 2.09
SPSB3-211ENST00000569380 PER1O15534 1290 aaPredicted RBP28.09■■■□□ 2.09
SPSB3-211ENST00000569380 PPIP5K1Q6PFW1 1433 aa28.09■■■□□ 2.09
SPSB3-211ENST00000569380 MIER1Q8N108 512 aa28.09■■■□□ 2.09
SPSB3-211ENST00000569380 CARD14Q9BXL6 1004 aa28.09■■■□□ 2.09
SPSB3-211ENST00000569380 TOPAZ1Q8N9V7 1692 aa28.08■■■□□ 2.09
SPSB3-211ENST00000569380 CD163L1Q9NR16 1453 aa28.08■■■□□ 2.09
SPSB3-211ENST00000569380 MSH6P52701 1360 aa28.05■■■□□ 2.08
SPSB3-211ENST00000569380 CCDC61Q9Y6R9 512 aa28.05■■■□□ 2.08
SPSB3-211ENST00000569380 A0A1W2PP64 1363 aa28.05■■■□□ 2.08
SPSB3-211ENST00000569380 C19orf44Q9H6X5 657 aa28.04■■■□□ 2.08
SPSB3-211ENST00000569380 ANKRD36BQ8N2N9 1353 aa28.02■■■□□ 2.08
SPSB3-211ENST00000569380 NINLQ9Y2I6 1382 aa28.01■■■□□ 2.07
SPSB3-211ENST00000569380 PMFBP1Q8TBY8 1022 aa28.01■■■□□ 2.07
SPSB3-211ENST00000569380 NSD3Q9BZ95 1437 aa28■■■□□ 2.07
SPSB3-211ENST00000569380 NCOA3Q9Y6Q9 1424 aa28■■■□□ 2.07
SPSB3-211ENST00000569380 ITSN1Q15811 1721 aa27.99■■■□□ 2.07
SPSB3-211ENST00000569380 ANKARQ7Z5J8 1434 aa27.99■■■□□ 2.07
SPSB3-211ENST00000569380 ROBO1Q9Y6N7 1651 aa27.97■■■□□ 2.07
SPSB3-211ENST00000569380 CC2D1BQ5T0F9 858 aaKnown RBP27.97■■■□□ 2.07
SPSB3-211ENST00000569380 KNSTRNQ9Y448 316 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 AKAP12Q02952 1782 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 CPSF1Q10570 1443 aaKnown RBP27.96■■■□□ 2.07
SPSB3-211ENST00000569380 ANP32CO43423 234 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 TERF2IPQ9NYB0 399 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 ACEP12821 1306 aa27.95■■■□□ 2.07
SPSB3-211ENST00000569380 ATF3P18847 181 aa27.95■■■□□ 2.06
SPSB3-211ENST00000569380 ORAI2Q96SN7 254 aa27.95■■■□□ 2.06
SPSB3-211ENST00000569380 PLEKHG3A1L390 1219 aa27.94■■■□□ 2.06
SPSB3-211ENST00000569380 AMER1Q5JTC6 1135 aaPredicted RBP27.94■■■□□ 2.06
SPSB3-211ENST00000569380 HDGFL2Q7Z4V5 671 aaPredicted RBP27.94■■■□□ 2.06
SPSB3-211ENST00000569380 MST1RQ04912 1400 aa27.94■■■□□ 2.06
SPSB3-211ENST00000569380 C1orf167Q5SNV9 1468 aa27.93■■■□□ 2.06
SPSB3-211ENST00000569380 SLAIN2Q9P270 581 aa27.93■■■□□ 2.06
SPSB3-211ENST00000569380 MON2Q7Z3U7 1717 aa27.92■■■□□ 2.06
SPSB3-211ENST00000569380 ESCO1Q5FWF5 840 aa27.92■■■□□ 2.06
SPSB3-211ENST00000569380 PRKRIP1Q9H875 184 aaPredicted RBP27.92■■■□□ 2.06
SPSB3-211ENST00000569380 DCCP43146 1447 aa27.92■■■□□ 2.06
SPSB3-211ENST00000569380 KTN1Q86UP2 1357 aaKnown RBP27.92■■■□□ 2.06
SPSB3-211ENST00000569380 PHF8Q9UPP1 1060 aa27.89■■■□□ 2.06
SPSB3-211ENST00000569380 CADPS2Q86UW7 1296 aa27.88■■■□□ 2.05
SPSB3-211ENST00000569380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.88■■■□□ 2.05
SPSB3-211ENST00000569380 NGDNQ8NEJ9 315 aaKnown RBP27.88■■■□□ 2.05
SPSB3-211ENST00000569380 MED1Q15648 1581 aaPredicted RBP27.88■■■□□ 2.05
SPSB3-211ENST00000569380 POLR3AO14802 1390 aaPredicted RBP27.87■■■□□ 2.05
SPSB3-211ENST00000569380 NRKQ7Z2Y5 1582 aa27.85■■■□□ 2.05
SPSB3-211ENST00000569380 USP6P35125 1406 aa27.84■■■□□ 2.05
SPSB3-211ENST00000569380 EDC4Q6P2E9 1401 aaKnown RBP27.83■■■□□ 2.05
SPSB3-211ENST00000569380 GGNBP2Q9H3C7 697 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms