RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 POGKQ9P215 609 aa28.5■■■□□ 2.15
SPSB3-211ENST00000569380 KCNA6P17658 529 aa28.48■■■□□ 2.15
SPSB3-211ENST00000569380 MINK1Q8N4C8 1332 aaPredicted RBP28.48■■■□□ 2.15
SPSB3-211ENST00000569380 DDX10Q13206 875 aaKnown RBP28.47■■■□□ 2.15
SPSB3-211ENST00000569380 UBAP1LF5GYI3 381 aa28.46■■■□□ 2.15
SPSB3-211ENST00000569380 TMF1P82094 1093 aa28.45■■■□□ 2.15
SPSB3-211ENST00000569380 PIK3R4Q99570 1358 aa28.45■■■□□ 2.14
SPSB3-211ENST00000569380 LRRC7Q96NW7 1537 aa28.44■■■□□ 2.14
SPSB3-211ENST00000569380 TULP4Q9NRJ4 1543 aa28.44■■■□□ 2.14
SPSB3-211ENST00000569380 SBNO2Q9Y2G9 1366 aa28.43■■■□□ 2.14
SPSB3-211ENST00000569380 FAM135BQ49AJ0 1406 aa28.43■■■□□ 2.14
SPSB3-211ENST00000569380 RBM33Q96EV2 1170 aaKnown RBP28.42■■■□□ 2.14
SPSB3-211ENST00000569380 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.42■■■□□ 2.14
SPSB3-211ENST00000569380 PTCH1Q13635 1447 aa28.39■■■□□ 2.14
SPSB3-211ENST00000569380 SIRT1Q96EB6 747 aa28.39■■■□□ 2.13
SPSB3-211ENST00000569380 NWD1Q149M9 1564 aa28.38■■■□□ 2.13
SPSB3-211ENST00000569380 DIEXFQ68CQ4 756 aaKnown RBP28.36■■■□□ 2.13
SPSB3-211ENST00000569380 CABP2Q9NPB3 220 aa28.34■■■□□ 2.13
SPSB3-211ENST00000569380 EVC2Q86UK5 1308 aa28.33■■■□□ 2.12
SPSB3-211ENST00000569380 MYOM1P52179 1685 aa28.31■■■□□ 2.12
SPSB3-211ENST00000569380 PIP4K2BP78356 416 aa28.3■■■□□ 2.12
SPSB3-211ENST00000569380 CDK19Q9BWU1 502 aa28.3■■■□□ 2.12
SPSB3-211ENST00000569380 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
SPSB3-211ENST00000569380 SRPK2P78362 688 aaKnown RBP28.29■■■□□ 2.12
SPSB3-211ENST00000569380 SCAF1Q9H7N4 1312 aaKnown RBP28.28■■■□□ 2.12
SPSB3-211ENST00000569380 TOM1O60784 492 aa28.28■■■□□ 2.12
SPSB3-211ENST00000569380 NALCNQ8IZF0 1738 aa28.28■■■□□ 2.12
SPSB3-211ENST00000569380 ADGRB2O60241 1585 aa28.26■■■□□ 2.11
SPSB3-211ENST00000569380 WASLO00401 505 aaPredicted RBP28.26■■■□□ 2.11
SPSB3-211ENST00000569380 CDCA8Q53HL2 280 aa28.26■■■□□ 2.11
SPSB3-211ENST00000569380 TMEM94Q12767 1356 aa28.25■■■□□ 2.11
SPSB3-211ENST00000569380 SLC24A1O60721 1099 aa28.25■■■□□ 2.11
SPSB3-211ENST00000569380 PROSER2Q86WR7 435 aaPredicted RBP28.25■■■□□ 2.11
SPSB3-211ENST00000569380 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
SPSB3-211ENST00000569380 NUTM2FA1L443 756 aa28.23■■■□□ 2.11
SPSB3-211ENST00000569380 SLC12A5Q9H2X9 1139 aa28.21■■■□□ 2.11
SPSB3-211ENST00000569380 TMC1Q8TDI8 760 aa28.2■■■□□ 2.11
SPSB3-211ENST00000569380 PRR36Q9H6K5 1346 aa28.19■■■□□ 2.1
SPSB3-211ENST00000569380 PANK3Q9H999 370 aa28.19■■■□□ 2.1
SPSB3-211ENST00000569380 ADGRL3Q9HAR2 1447 aa28.17■■■□□ 2.1
SPSB3-211ENST00000569380 HSPA1LP34931 641 aa28.16■■■□□ 2.1
SPSB3-211ENST00000569380 C14orf37Q86TY3 774 aa28.16■■■□□ 2.1
SPSB3-211ENST00000569380 USP32Q8NFA0 1604 aa28.16■■■□□ 2.1
SPSB3-211ENST00000569380 NUDT16Q96DE0 195 aaKnown RBP28.15■■■□□ 2.1
SPSB3-211ENST00000569380 PUS7Q96PZ0 661 aaKnown RBP28.15■■■□□ 2.1
SPSB3-211ENST00000569380 RGPD8O14715 1765 aaPredicted RBP28.15■■■□□ 2.1
SPSB3-211ENST00000569380 ATP7BP35670 1465 aa28.15■■■□□ 2.1
SPSB3-211ENST00000569380 ATAD2Q6PL18 1390 aa28.13■■■□□ 2.09
SPSB3-211ENST00000569380 FMN2Q9NZ56 1722 aa28.13■■■□□ 2.09
SPSB3-211ENST00000569380 CNGB1Q14028 1251 aaPredicted RBP28.13■■■□□ 2.09
SPSB3-211ENST00000569380 CDC42BPGQ6DT37 1551 aa28.12■■■□□ 2.09
SPSB3-211ENST00000569380 CABP1Q9NZU7 370 aa28.11■■■□□ 2.09
SPSB3-211ENST00000569380 PER1O15534 1290 aaPredicted RBP28.09■■■□□ 2.09
SPSB3-211ENST00000569380 PPIP5K1Q6PFW1 1433 aa28.09■■■□□ 2.09
SPSB3-211ENST00000569380 MIER1Q8N108 512 aa28.09■■■□□ 2.09
SPSB3-211ENST00000569380 CARD14Q9BXL6 1004 aa28.09■■■□□ 2.09
SPSB3-211ENST00000569380 TOPAZ1Q8N9V7 1692 aa28.08■■■□□ 2.09
SPSB3-211ENST00000569380 CD163L1Q9NR16 1453 aa28.08■■■□□ 2.09
SPSB3-211ENST00000569380 MSH6P52701 1360 aa28.05■■■□□ 2.08
SPSB3-211ENST00000569380 CCDC61Q9Y6R9 512 aa28.05■■■□□ 2.08
SPSB3-211ENST00000569380 A0A1W2PP64 1363 aa28.05■■■□□ 2.08
SPSB3-211ENST00000569380 C19orf44Q9H6X5 657 aa28.04■■■□□ 2.08
SPSB3-211ENST00000569380 ANKRD36BQ8N2N9 1353 aa28.02■■■□□ 2.08
SPSB3-211ENST00000569380 NINLQ9Y2I6 1382 aa28.01■■■□□ 2.07
SPSB3-211ENST00000569380 PMFBP1Q8TBY8 1022 aa28.01■■■□□ 2.07
SPSB3-211ENST00000569380 NSD3Q9BZ95 1437 aa28■■■□□ 2.07
SPSB3-211ENST00000569380 NCOA3Q9Y6Q9 1424 aa28■■■□□ 2.07
SPSB3-211ENST00000569380 ITSN1Q15811 1721 aa27.99■■■□□ 2.07
SPSB3-211ENST00000569380 ANKARQ7Z5J8 1434 aa27.99■■■□□ 2.07
SPSB3-211ENST00000569380 ROBO1Q9Y6N7 1651 aa27.97■■■□□ 2.07
SPSB3-211ENST00000569380 CC2D1BQ5T0F9 858 aaKnown RBP27.97■■■□□ 2.07
SPSB3-211ENST00000569380 KNSTRNQ9Y448 316 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 AKAP12Q02952 1782 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 CPSF1Q10570 1443 aaKnown RBP27.96■■■□□ 2.07
SPSB3-211ENST00000569380 ANP32CO43423 234 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 TERF2IPQ9NYB0 399 aa27.96■■■□□ 2.07
SPSB3-211ENST00000569380 ACEP12821 1306 aa27.95■■■□□ 2.07
SPSB3-211ENST00000569380 ATF3P18847 181 aa27.95■■■□□ 2.06
SPSB3-211ENST00000569380 ORAI2Q96SN7 254 aa27.95■■■□□ 2.06
SPSB3-211ENST00000569380 PLEKHG3A1L390 1219 aa27.94■■■□□ 2.06
SPSB3-211ENST00000569380 AMER1Q5JTC6 1135 aaPredicted RBP27.94■■■□□ 2.06
SPSB3-211ENST00000569380 HDGFL2Q7Z4V5 671 aaPredicted RBP27.94■■■□□ 2.06
SPSB3-211ENST00000569380 MST1RQ04912 1400 aa27.94■■■□□ 2.06
SPSB3-211ENST00000569380 C1orf167Q5SNV9 1468 aa27.93■■■□□ 2.06
SPSB3-211ENST00000569380 SLAIN2Q9P270 581 aa27.93■■■□□ 2.06
SPSB3-211ENST00000569380 MON2Q7Z3U7 1717 aa27.92■■■□□ 2.06
SPSB3-211ENST00000569380 ESCO1Q5FWF5 840 aa27.92■■■□□ 2.06
SPSB3-211ENST00000569380 PRKRIP1Q9H875 184 aaPredicted RBP27.92■■■□□ 2.06
SPSB3-211ENST00000569380 DCCP43146 1447 aa27.92■■■□□ 2.06
SPSB3-211ENST00000569380 KTN1Q86UP2 1357 aaKnown RBP27.92■■■□□ 2.06
SPSB3-211ENST00000569380 PHF8Q9UPP1 1060 aa27.89■■■□□ 2.06
SPSB3-211ENST00000569380 CADPS2Q86UW7 1296 aa27.88■■■□□ 2.05
SPSB3-211ENST00000569380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.88■■■□□ 2.05
SPSB3-211ENST00000569380 NGDNQ8NEJ9 315 aaKnown RBP27.88■■■□□ 2.05
SPSB3-211ENST00000569380 MED1Q15648 1581 aaPredicted RBP27.88■■■□□ 2.05
SPSB3-211ENST00000569380 POLR3AO14802 1390 aaPredicted RBP27.87■■■□□ 2.05
SPSB3-211ENST00000569380 NRKQ7Z2Y5 1582 aa27.85■■■□□ 2.05
SPSB3-211ENST00000569380 USP6P35125 1406 aa27.84■■■□□ 2.05
SPSB3-211ENST00000569380 EDC4Q6P2E9 1401 aaKnown RBP27.83■■■□□ 2.05
SPSB3-211ENST00000569380 GGNBP2Q9H3C7 697 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms