RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 QRICH2Q9H0J4 1663 aa18.55■□□□□ 0.56
CNOT1-217ENST00000569263 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
CNOT1-217ENST00000569263 DCCP43146 1447 aa18.55■□□□□ 0.56
CNOT1-217ENST00000569263 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
CNOT1-217ENST00000569263 C19orf44Q9H6X5 657 aa18.54■□□□□ 0.56
CNOT1-217ENST00000569263 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
CNOT1-217ENST00000569263 ATF3P18847 181 aa18.53■□□□□ 0.56
CNOT1-217ENST00000569263 TOM1O60784 492 aa18.52■□□□□ 0.56
CNOT1-217ENST00000569263 ADGRB2O60241 1585 aa18.51■□□□□ 0.55
CNOT1-217ENST00000569263 FMN2Q9NZ56 1722 aa18.5■□□□□ 0.55
CNOT1-217ENST00000569263 CADPS2Q86UW7 1296 aa18.5■□□□□ 0.55
CNOT1-217ENST00000569263 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
CNOT1-217ENST00000569263 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
CNOT1-217ENST00000569263 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
CNOT1-217ENST00000569263 PIP4K2BP78356 416 aa18.46■□□□□ 0.55
CNOT1-217ENST00000569263 FBXO41Q8TF61 875 aa18.46■□□□□ 0.55
CNOT1-217ENST00000569263 HIRIP3Q9BW71 556 aaPredicted RBP18.46■□□□□ 0.55
CNOT1-217ENST00000569263 USP47Q96K76 1375 aa18.45■□□□□ 0.54
CNOT1-217ENST00000569263 ROBO1Q9Y6N7 1651 aa18.45■□□□□ 0.54
CNOT1-217ENST00000569263 MST1RQ04912 1400 aa18.45■□□□□ 0.54
CNOT1-217ENST00000569263 SLAIN2Q9P270 581 aa18.43■□□□□ 0.54
CNOT1-217ENST00000569263 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
CNOT1-217ENST00000569263 ITSN1Q15811 1721 aa18.41■□□□□ 0.54
CNOT1-217ENST00000569263 TULP4Q9NRJ4 1543 aa18.41■□□□□ 0.54
CNOT1-217ENST00000569263 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
CNOT1-217ENST00000569263 C1orf167Q5SNV9 1468 aa18.4■□□□□ 0.54
CNOT1-217ENST00000569263 WASLO00401 505 aaPredicted RBP18.4■□□□□ 0.54
CNOT1-217ENST00000569263 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
CNOT1-217ENST00000569263 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
CNOT1-217ENST00000569263 ANKARQ7Z5J8 1434 aa18.39■□□□□ 0.53
CNOT1-217ENST00000569263 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
CNOT1-217ENST00000569263 ST20-MTHFSA0A0A6YYL1 179 aa18.37■□□□□ 0.53
CNOT1-217ENST00000569263 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
CNOT1-217ENST00000569263 CDK19Q9BWU1 502 aa18.36■□□□□ 0.53
CNOT1-217ENST00000569263 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
CNOT1-217ENST00000569263 TOPAZ1Q8N9V7 1692 aa18.35■□□□□ 0.53
CNOT1-217ENST00000569263 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
CNOT1-217ENST00000569263 ATP7BP35670 1465 aa18.35■□□□□ 0.53
CNOT1-217ENST00000569263 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
CNOT1-217ENST00000569263 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
CNOT1-217ENST00000569263 SRPK2P78362 688 aaKnown RBP18.35■□□□□ 0.53
CNOT1-217ENST00000569263 ESCO1Q5FWF5 840 aa18.35■□□□□ 0.53
CNOT1-217ENST00000569263 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
CNOT1-217ENST00000569263 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
CNOT1-217ENST00000569263 AHDC1Q5TGY3 1603 aaPredicted RBP18.33■□□□□ 0.52
CNOT1-217ENST00000569263 SLC24A1O60721 1099 aa18.32■□□□□ 0.52
CNOT1-217ENST00000569263 PRR36Q9H6K5 1346 aa18.31■□□□□ 0.52
CNOT1-217ENST00000569263 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
CNOT1-217ENST00000569263 NUDT16Q96DE0 195 aaKnown RBP18.31■□□□□ 0.52
CNOT1-217ENST00000569263 TESK2Q96S53 571 aa18.31■□□□□ 0.52
CNOT1-217ENST00000569263 CABP2Q9NPB3 220 aa18.31■□□□□ 0.52
CNOT1-217ENST00000569263 TMF1P82094 1093 aa18.29■□□□□ 0.52
CNOT1-217ENST00000569263 ILDR1Q86SU0 546 aaPredicted RBP18.29■□□□□ 0.52
CNOT1-217ENST00000569263 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
CNOT1-217ENST00000569263 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
CNOT1-217ENST00000569263 COL16A1Q07092 1604 aaPredicted RBP18.27■□□□□ 0.52
CNOT1-217ENST00000569263 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
CNOT1-217ENST00000569263 HSPA1LP34931 641 aa18.27■□□□□ 0.52
CNOT1-217ENST00000569263 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
CNOT1-217ENST00000569263 DISP3Q9P2K9 1392 aa18.27■□□□□ 0.51
CNOT1-217ENST00000569263 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
CNOT1-217ENST00000569263 PMFBP1Q8TBY8 1022 aa18.26■□□□□ 0.51
CNOT1-217ENST00000569263 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
CNOT1-217ENST00000569263 FOXO3O43524 673 aa18.24■□□□□ 0.51
CNOT1-217ENST00000569263 CDCA8Q53HL2 280 aa18.24■□□□□ 0.51
CNOT1-217ENST00000569263 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
CNOT1-217ENST00000569263 PXDNQ92626 1479 aa18.22■□□□□ 0.51
CNOT1-217ENST00000569263 AKAP12Q02952 1782 aa18.22■□□□□ 0.51
CNOT1-217ENST00000569263 XPCQ01831 940 aaPredicted RBP18.21■□□□□ 0.51
CNOT1-217ENST00000569263 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
CNOT1-217ENST00000569263 CABP1Q9NZU7 370 aa18.21■□□□□ 0.51
CNOT1-217ENST00000569263 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
CNOT1-217ENST00000569263 PSME1Q06323 249 aa18.2■□□□□ 0.5
CNOT1-217ENST00000569263 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
CNOT1-217ENST00000569263 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
CNOT1-217ENST00000569263 ACEP12821 1306 aa18.2■□□□□ 0.5
CNOT1-217ENST00000569263 SOS2Q07890 1332 aaPredicted RBP18.2■□□□□ 0.5
CNOT1-217ENST00000569263 MYOM1P52179 1685 aa18.19■□□□□ 0.5
CNOT1-217ENST00000569263 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
CNOT1-217ENST00000569263 PLEKHG3A1L390 1219 aa18.19■□□□□ 0.5
CNOT1-217ENST00000569263 KRT28Q7Z3Y7 464 aa18.19■□□□□ 0.5
CNOT1-217ENST00000569263 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
CNOT1-217ENST00000569263 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
CNOT1-217ENST00000569263 MON2Q7Z3U7 1717 aa18.18■□□□□ 0.5
CNOT1-217ENST00000569263 LRRC59Q96AG4 307 aaKnown RBP18.17■□□□□ 0.5
CNOT1-217ENST00000569263 JCADQ9P266 1359 aa18.16■□□□□ 0.5
CNOT1-217ENST00000569263 TNS3Q68CZ2 1445 aa18.15■□□□□ 0.5
CNOT1-217ENST00000569263 SBNO1A3KN83 1393 aa18.15■□□□□ 0.5
CNOT1-217ENST00000569263 NRKQ7Z2Y5 1582 aa18.14■□□□□ 0.49
CNOT1-217ENST00000569263 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
CNOT1-217ENST00000569263 TERF2IPQ9NYB0 399 aa18.14■□□□□ 0.49
CNOT1-217ENST00000569263 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
CNOT1-217ENST00000569263 USP6P35125 1406 aa18.14■□□□□ 0.49
CNOT1-217ENST00000569263 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
CNOT1-217ENST00000569263 SLC12A5Q9H2X9 1139 aa18.13■□□□□ 0.49
CNOT1-217ENST00000569263 KTN1Q86UP2 1357 aaKnown RBP18.13■□□□□ 0.49
CNOT1-217ENST00000569263 PNPLA6Q8IY17 1366 aa18.13■□□□□ 0.49
CNOT1-217ENST00000569263 CPSF1Q10570 1443 aaKnown RBP18.13■□□□□ 0.49
CNOT1-217ENST00000569263 COL22A1Q8NFW1 1626 aaPredicted RBP18.12■□□□□ 0.49
CNOT1-217ENST00000569263 LMOD2Q6P5Q4 547 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms