RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
COMMD4-224ENST00000568877 ZEB1P37275 1124 aaPredicted RBP23.69■■□□□ 1.38
COMMD4-224ENST00000568877 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.66■■□□□ 1.38
COMMD4-224ENST00000568877 NALCNQ8IZF0 1738 aa23.65■■□□□ 1.38
COMMD4-224ENST00000568877 USP47Q96K76 1375 aa23.65■■□□□ 1.38
COMMD4-224ENST00000568877 MINK1Q8N4C8 1332 aaPredicted RBP23.64■■□□□ 1.38
COMMD4-224ENST00000568877 ATF3P18847 181 aa23.64■■□□□ 1.37
COMMD4-224ENST00000568877 DCCP43146 1447 aa23.63■■□□□ 1.37
COMMD4-224ENST00000568877 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
COMMD4-224ENST00000568877 HIRIP3Q9BW71 556 aaPredicted RBP23.63■■□□□ 1.37
COMMD4-224ENST00000568877 ST20-MTHFSA0A0A6YYL1 179 aa23.61■■□□□ 1.37
COMMD4-224ENST00000568877 TOM1O60784 492 aa23.6■■□□□ 1.37
COMMD4-224ENST00000568877 UBAP1LF5GYI3 381 aa23.59■■□□□ 1.37
COMMD4-224ENST00000568877 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
COMMD4-224ENST00000568877 QRICH2Q9H0J4 1663 aa23.58■■□□□ 1.37
COMMD4-224ENST00000568877 ADGRB2O60241 1585 aa23.58■■□□□ 1.37
COMMD4-224ENST00000568877 EIF4G2P78344 907 aaKnown RBP eCLIP23.58■■□□□ 1.37
COMMD4-224ENST00000568877 SBNO2Q9Y2G9 1366 aa23.57■■□□□ 1.36
COMMD4-224ENST00000568877 WASLO00401 505 aaPredicted RBP23.57■■□□□ 1.36
COMMD4-224ENST00000568877 SLAIN2Q9P270 581 aa23.56■■□□□ 1.36
COMMD4-224ENST00000568877 MST1RQ04912 1400 aa23.54■■□□□ 1.36
COMMD4-224ENST00000568877 HSPA5P11021 654 aaKnown RBP23.54■■□□□ 1.36
COMMD4-224ENST00000568877 TESK2Q96S53 571 aa23.54■■□□□ 1.36
COMMD4-224ENST00000568877 CDK19Q9BWU1 502 aa23.54■■□□□ 1.36
COMMD4-224ENST00000568877 NUTM2FA1L443 756 aa23.52■■□□□ 1.36
COMMD4-224ENST00000568877 SLC24A1O60721 1099 aa23.52■■□□□ 1.36
COMMD4-224ENST00000568877 EVC2Q86UK5 1308 aa23.52■■□□□ 1.36
COMMD4-224ENST00000568877 C1orf167Q5SNV9 1468 aa23.5■■□□□ 1.35
COMMD4-224ENST00000568877 PIP4K2BP78356 416 aa23.5■■□□□ 1.35
COMMD4-224ENST00000568877 FMN2Q9NZ56 1722 aa23.5■■□□□ 1.35
COMMD4-224ENST00000568877 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
COMMD4-224ENST00000568877 SRPK2P78362 688 aaKnown RBP23.49■■□□□ 1.35
COMMD4-224ENST00000568877 CABP2Q9NPB3 220 aa23.47■■□□□ 1.35
COMMD4-224ENST00000568877 SCAF1Q9H7N4 1312 aaKnown RBP23.47■■□□□ 1.35
COMMD4-224ENST00000568877 ANKARQ7Z5J8 1434 aa23.47■■□□□ 1.35
COMMD4-224ENST00000568877 TMF1P82094 1093 aa23.46■■□□□ 1.35
COMMD4-224ENST00000568877 NUDT16Q96DE0 195 aaKnown RBP23.46■■□□□ 1.35
COMMD4-224ENST00000568877 PRR36Q9H6K5 1346 aa23.46■■□□□ 1.35
COMMD4-224ENST00000568877 ESCO1Q5FWF5 840 aa23.45■■□□□ 1.34
COMMD4-224ENST00000568877 FBXO41Q8TF61 875 aa23.45■■□□□ 1.34
COMMD4-224ENST00000568877 ORAI2Q96SN7 254 aa23.45■■□□□ 1.34
COMMD4-224ENST00000568877 BRINP3Q76B58 766 aa23.44■■□□□ 1.34
COMMD4-224ENST00000568877 USP32Q8NFA0 1604 aa23.43■■□□□ 1.34
COMMD4-224ENST00000568877 ATP7BP35670 1465 aa23.43■■□□□ 1.34
COMMD4-224ENST00000568877 DISP3Q9P2K9 1392 aa23.42■■□□□ 1.34
COMMD4-224ENST00000568877 PUS7Q96PZ0 661 aaKnown RBP23.42■■□□□ 1.34
COMMD4-224ENST00000568877 CCDC61Q9Y6R9 512 aa23.42■■□□□ 1.34
COMMD4-224ENST00000568877 ROBO1Q9Y6N7 1651 aa23.4■■□□□ 1.34
COMMD4-224ENST00000568877 CDCA8Q53HL2 280 aa23.39■■□□□ 1.33
COMMD4-224ENST00000568877 PHF8Q9UPP1 1060 aa23.39■■□□□ 1.33
COMMD4-224ENST00000568877 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.33
COMMD4-224ENST00000568877 RGPD8O14715 1765 aaPredicted RBP23.37■■□□□ 1.33
COMMD4-224ENST00000568877 PMFBP1Q8TBY8 1022 aa23.36■■□□□ 1.33
COMMD4-224ENST00000568877 PPIP5K1Q6PFW1 1433 aa23.35■■□□□ 1.33
COMMD4-224ENST00000568877 PLEKHG3A1L390 1219 aa23.35■■□□□ 1.33
COMMD4-224ENST00000568877 CABP1Q9NZU7 370 aa23.35■■□□□ 1.33
COMMD4-224ENST00000568877 FOXO3O43524 673 aa23.34■■□□□ 1.33
COMMD4-224ENST00000568877 ITSN1Q15811 1721 aa23.33■■□□□ 1.33
COMMD4-224ENST00000568877 KIF1AQ12756 1690 aa23.33■■□□□ 1.33
COMMD4-224ENST00000568877 TOPAZ1Q8N9V7 1692 aa23.33■■□□□ 1.33
COMMD4-224ENST00000568877 C11orf95C9JLR9 678 aaPredicted RBP23.33■■□□□ 1.33
COMMD4-224ENST00000568877 DDX17Q92841 729 aaKnown RBP23.32■■□□□ 1.32
COMMD4-224ENST00000568877 NPHP3Q7Z494 1330 aa23.32■■□□□ 1.32
COMMD4-224ENST00000568877 NGDNQ8NEJ9 315 aaKnown RBP23.31■■□□□ 1.32
COMMD4-224ENST00000568877 TMC1Q8TDI8 760 aa23.31■■□□□ 1.32
COMMD4-224ENST00000568877 ACEP12821 1306 aa23.3■■□□□ 1.32
COMMD4-224ENST00000568877 AHDC1Q5TGY3 1603 aaPredicted RBP23.3■■□□□ 1.32
COMMD4-224ENST00000568877 POLR3GLQ9BT43 218 aa23.29■■□□□ 1.32
COMMD4-224ENST00000568877 SLC12A5Q9H2X9 1139 aa23.29■■□□□ 1.32
COMMD4-224ENST00000568877 POLR3AO14802 1390 aaPredicted RBP23.28■■□□□ 1.32
COMMD4-224ENST00000568877 PSME1Q06323 249 aa23.28■■□□□ 1.32
COMMD4-224ENST00000568877 NHSL1Q5SYE7 1610 aa23.28■■□□□ 1.32
COMMD4-224ENST00000568877 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
COMMD4-224ENST00000568877 HSPA1LP34931 641 aa23.27■■□□□ 1.32
COMMD4-224ENST00000568877 KRT28Q7Z3Y7 464 aa23.27■■□□□ 1.32
COMMD4-224ENST00000568877 SOS2Q07890 1332 aaPredicted RBP23.27■■□□□ 1.32
COMMD4-224ENST00000568877 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
COMMD4-224ENST00000568877 KIF7Q2M1P5 1343 aa23.26■■□□□ 1.31
COMMD4-224ENST00000568877 PXDNQ92626 1479 aa23.24■■□□□ 1.31
COMMD4-224ENST00000568877 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
COMMD4-224ENST00000568877 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
COMMD4-224ENST00000568877 TERF2IPQ9NYB0 399 aa23.23■■□□□ 1.31
COMMD4-224ENST00000568877 CPSF1Q10570 1443 aaKnown RBP23.22■■□□□ 1.31
COMMD4-224ENST00000568877 HDGFL2Q7Z4V5 671 aaPredicted RBP23.21■■□□□ 1.31
COMMD4-224ENST00000568877 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
COMMD4-224ENST00000568877 LRRC59Q96AG4 307 aaKnown RBP23.21■■□□□ 1.31
COMMD4-224ENST00000568877 WASHC2AQ641Q2 1341 aa23.21■■□□□ 1.31
COMMD4-224ENST00000568877 CCDC7Q96M83 1385 aa23.21■■□□□ 1.31
COMMD4-224ENST00000568877 CD163L1Q9NR16 1453 aa23.21■■□□□ 1.31
COMMD4-224ENST00000568877 COL16A1Q07092 1604 aaPredicted RBP23.21■■□□□ 1.31
COMMD4-224ENST00000568877 SBNO1A3KN83 1393 aa23.19■■□□□ 1.3
COMMD4-224ENST00000568877 KTN1Q86UP2 1357 aaKnown RBP23.19■■□□□ 1.3
COMMD4-224ENST00000568877 USP6P35125 1406 aa23.18■■□□□ 1.3
COMMD4-224ENST00000568877 A0A1W2PP64 1363 aa23.18■■□□□ 1.3
COMMD4-224ENST00000568877 ANKRD36BQ8N2N9 1353 aa23.18■■□□□ 1.3
COMMD4-224ENST00000568877 BRD4O60885 1362 aaPredicted RBP23.17■■□□□ 1.3
COMMD4-224ENST00000568877 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
COMMD4-224ENST00000568877 MYOM1P52179 1685 aa23.17■■□□□ 1.3
COMMD4-224ENST00000568877 PAK3O75914 559 aaPredicted RBP23.17■■□□□ 1.3
COMMD4-224ENST00000568877 AKAP12Q02952 1782 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms