RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 ARHGEF28Q8N1W1 1705 aaKnown RBP12.67□□□□□ -0.38
TCF4-240ENST00000568673 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
TCF4-240ENST00000568673 CGNL1Q0VF96 1302 aa12.67□□□□□ -0.38
TCF4-240ENST00000568673 USP32Q8NFA0 1604 aa12.66□□□□□ -0.38
TCF4-240ENST00000568673 PREX1Q8TCU6 1659 aa12.66□□□□□ -0.38
TCF4-240ENST00000568673 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
TCF4-240ENST00000568673 TMEM131LA2VDJ0 1609 aa12.65□□□□□ -0.38
TCF4-240ENST00000568673 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
TCF4-240ENST00000568673 E9PSI1 815 aa12.65□□□□□ -0.38
TCF4-240ENST00000568673 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.65□□□□□ -0.38
TCF4-240ENST00000568673 ANKRD36BQ8N2N9 1353 aa12.64□□□□□ -0.39
TCF4-240ENST00000568673 C20orf194Q5TEA3 1177 aa12.64□□□□□ -0.39
TCF4-240ENST00000568673 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
TCF4-240ENST00000568673 PPP6R1Q9UPN7 881 aa12.64□□□□□ -0.39
TCF4-240ENST00000568673 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
TCF4-240ENST00000568673 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
TCF4-240ENST00000568673 NKTRP30414 1462 aaKnown RBP12.63□□□□□ -0.39
TCF4-240ENST00000568673 NSD2O96028 1365 aa12.63□□□□□ -0.39
TCF4-240ENST00000568673 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
TCF4-240ENST00000568673 DIP2BQ9P265 1576 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 MYO5BQ9ULV0 1848 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 STK26Q9P289 416 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 MTHFSP49914 203 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
TCF4-240ENST00000568673 MS4A1P11836 297 aa12.61□□□□□ -0.39
TCF4-240ENST00000568673 SAFB2Q14151 953 aaKnown RBP eCLIP12.61□□□□□ -0.39
TCF4-240ENST00000568673 WWC1Q8IX03 1113 aa12.61□□□□□ -0.39
TCF4-240ENST00000568673 RUNDC1Q96C34 613 aa12.61□□□□□ -0.39
TCF4-240ENST00000568673 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
TCF4-240ENST00000568673 CFAP53Q96M91 514 aa12.61□□□□□ -0.39
TCF4-240ENST00000568673 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
TCF4-240ENST00000568673 AGLP35573 1532 aa12.6□□□□□ -0.39
TCF4-240ENST00000568673 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
TCF4-240ENST00000568673 PTPRMP28827 1452 aa12.59□□□□□ -0.39
TCF4-240ENST00000568673 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
TCF4-240ENST00000568673 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
TCF4-240ENST00000568673 DMRT2Q9Y5R5 561 aa12.59□□□□□ -0.39
TCF4-240ENST00000568673 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
TCF4-240ENST00000568673 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
TCF4-240ENST00000568673 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
TCF4-240ENST00000568673 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
TCF4-240ENST00000568673 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.4
TCF4-240ENST00000568673 ABCC11Q96J66 1382 aa12.58□□□□□ -0.4
TCF4-240ENST00000568673 KDM2BQ8NHM5 1336 aa12.58□□□□□ -0.4
TCF4-240ENST00000568673 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
TCF4-240ENST00000568673 POGKQ9P215 609 aa12.58□□□□□ -0.4
TCF4-240ENST00000568673 A0A1W2PP64 1363 aa12.57□□□□□ -0.4
TCF4-240ENST00000568673 PDE4AP27815 886 aa12.57□□□□□ -0.4
TCF4-240ENST00000568673 TSPOAP1O95153 1857 aa12.57□□□□□ -0.4
TCF4-240ENST00000568673 BCAR3O75815 825 aa12.57□□□□□ -0.4
TCF4-240ENST00000568673 CENPQQ7L2Z9 268 aaPredicted RBP12.57□□□□□ -0.4
TCF4-240ENST00000568673 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
TCF4-240ENST00000568673 ALKQ9UM73 1620 aa12.56□□□□□ -0.4
TCF4-240ENST00000568673 CCDC27Q2M243 656 aa12.56□□□□□ -0.4
TCF4-240ENST00000568673 BACH2Q9BYV9 841 aa12.56□□□□□ -0.4
TCF4-240ENST00000568673 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
TCF4-240ENST00000568673 WDR63Q8IWG1 891 aa12.56□□□□□ -0.4
TCF4-240ENST00000568673 IPO9Q96P70 1041 aaKnown RBP12.56□□□□□ -0.4
TCF4-240ENST00000568673 IQSEC2Q5JU85 1478 aa12.55□□□□□ -0.4
TCF4-240ENST00000568673 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
TCF4-240ENST00000568673 NOP58Q9Y2X3 529 aaKnown RBP12.55□□□□□ -0.4
TCF4-240ENST00000568673 CLTCQ00610 1675 aaKnown RBP12.54□□□□□ -0.4
TCF4-240ENST00000568673 RRP7AQ9Y3A4 280 aaKnown RBP12.54□□□□□ -0.4
TCF4-240ENST00000568673 FYB1O15117 783 aa12.54□□□□□ -0.4
TCF4-240ENST00000568673 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
TCF4-240ENST00000568673 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
TCF4-240ENST00000568673 SPATA31D1Q6ZQQ2 1576 aa12.53□□□□□ -0.4
TCF4-240ENST00000568673 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
TCF4-240ENST00000568673 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
TCF4-240ENST00000568673 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
TCF4-240ENST00000568673 GGNBP2Q9H3C7 697 aa12.53□□□□□ -0.4
TCF4-240ENST00000568673 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
TCF4-240ENST00000568673 MED14O60244 1454 aa12.52□□□□□ -0.4
TCF4-240ENST00000568673 ARHGEF40Q8TER5 1519 aa12.52□□□□□ -0.4
TCF4-240ENST00000568673 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
TCF4-240ENST00000568673 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
TCF4-240ENST00000568673 MLECQ14165 292 aa12.5□□□□□ -0.41
TCF4-240ENST00000568673 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
TCF4-240ENST00000568673 NLRP1Q9C000 1473 aa12.5□□□□□ -0.41
TCF4-240ENST00000568673 DLC1Q96QB1 1528 aa12.5□□□□□ -0.41
TCF4-240ENST00000568673 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
TCF4-240ENST00000568673 RARSP54136 660 aaKnown RBP12.5□□□□□ -0.41
TCF4-240ENST00000568673 SKAP1Q86WV1 359 aa12.5□□□□□ -0.41
TCF4-240ENST00000568673 ZBTB47Q9UFB7 747 aaPredicted RBP12.5□□□□□ -0.41
TCF4-240ENST00000568673 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
TCF4-240ENST00000568673 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
TCF4-240ENST00000568673 WAPLQ7Z5K2 1190 aa12.48□□□□□ -0.41
TCF4-240ENST00000568673 PLEKHF1Q96S99 279 aa12.48□□□□□ -0.41
TCF4-240ENST00000568673 COL3A1P02461 1466 aaPredicted RBP12.48□□□□□ -0.41
TCF4-240ENST00000568673 ADGRB2O60241 1585 aa12.48□□□□□ -0.41
TCF4-240ENST00000568673 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
TCF4-240ENST00000568673 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.48□□□□□ -0.41
TCF4-240ENST00000568673 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
TCF4-240ENST00000568673 ZMYM3Q14202 1370 aa12.47□□□□□ -0.41
TCF4-240ENST00000568673 PNPLA6Q8IY17 1366 aa12.47□□□□□ -0.41
TCF4-240ENST00000568673 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms