RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
FANCA-231ENST00000568626 NALCNQ8IZF0 1738 aa16.93■□□□□ 0.3
FANCA-231ENST00000568626 TMEM94Q12767 1356 aa16.93■□□□□ 0.3
FANCA-231ENST00000568626 PROSER2Q86WR7 435 aaPredicted RBP16.93■□□□□ 0.3
FANCA-231ENST00000568626 PRAM1Q96QH2 718 aa16.93■□□□□ 0.3
FANCA-231ENST00000568626 XIRP1Q702N8 1843 aaKnown RBP16.92■□□□□ 0.3
FANCA-231ENST00000568626 EIF4G2P78344 907 aaKnown RBP eCLIP16.92■□□□□ 0.3
FANCA-231ENST00000568626 CDC42BPGQ6DT37 1551 aa16.92■□□□□ 0.3
FANCA-231ENST00000568626 PLEKHH1Q9ULM0 1364 aa16.91■□□□□ 0.3
FANCA-231ENST00000568626 DCCP43146 1447 aa16.91■□□□□ 0.3
FANCA-231ENST00000568626 SLC24A1O60721 1099 aa16.91■□□□□ 0.3
FANCA-231ENST00000568626 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.9■□□□□ 0.3
FANCA-231ENST00000568626 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
FANCA-231ENST00000568626 MSH6P52701 1360 aa16.89■□□□□ 0.29
FANCA-231ENST00000568626 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
FANCA-231ENST00000568626 ST20-MTHFSA0A0A6YYL1 179 aa16.86■□□□□ 0.29
FANCA-231ENST00000568626 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
FANCA-231ENST00000568626 C19orf44Q9H6X5 657 aa16.85■□□□□ 0.29
FANCA-231ENST00000568626 FMN2Q9NZ56 1722 aa16.84■□□□□ 0.29
FANCA-231ENST00000568626 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
FANCA-231ENST00000568626 TULP4Q9NRJ4 1543 aa16.84■□□□□ 0.29
FANCA-231ENST00000568626 MINK1Q8N4C8 1332 aaPredicted RBP16.83■□□□□ 0.28
FANCA-231ENST00000568626 TESK2Q96S53 571 aa16.83■□□□□ 0.28
FANCA-231ENST00000568626 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
FANCA-231ENST00000568626 SCAF1Q9H7N4 1312 aaKnown RBP16.82■□□□□ 0.28
FANCA-231ENST00000568626 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
FANCA-231ENST00000568626 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
FANCA-231ENST00000568626 ANKARQ7Z5J8 1434 aa16.81■□□□□ 0.28
FANCA-231ENST00000568626 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
FANCA-231ENST00000568626 ATF3P18847 181 aa16.81■□□□□ 0.28
FANCA-231ENST00000568626 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
FANCA-231ENST00000568626 TMF1P82094 1093 aa16.81■□□□□ 0.28
FANCA-231ENST00000568626 ITSN1Q15811 1721 aa16.8■□□□□ 0.28
FANCA-231ENST00000568626 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
FANCA-231ENST00000568626 CDCA8Q53HL2 280 aa16.79■□□□□ 0.28
FANCA-231ENST00000568626 PUS7Q96PZ0 661 aaKnown RBP16.78■□□□□ 0.28
FANCA-231ENST00000568626 ATP7BP35670 1465 aa16.78■□□□□ 0.28
FANCA-231ENST00000568626 MST1RQ04912 1400 aa16.78■□□□□ 0.28
FANCA-231ENST00000568626 ATAD2Q6PL18 1390 aa16.77■□□□□ 0.28
FANCA-231ENST00000568626 TOM1O60784 492 aa16.77■□□□□ 0.28
FANCA-231ENST00000568626 HSPA1LP34931 641 aa16.77■□□□□ 0.28
FANCA-231ENST00000568626 TOPAZ1Q8N9V7 1692 aa16.77■□□□□ 0.28
FANCA-231ENST00000568626 USP32Q8NFA0 1604 aa16.77■□□□□ 0.27
FANCA-231ENST00000568626 SRPK2P78362 688 aaKnown RBP16.76■□□□□ 0.27
FANCA-231ENST00000568626 CDK19Q9BWU1 502 aa16.76■□□□□ 0.27
FANCA-231ENST00000568626 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
FANCA-231ENST00000568626 C1orf167Q5SNV9 1468 aa16.74■□□□□ 0.27
FANCA-231ENST00000568626 NINLQ9Y2I6 1382 aa16.74■□□□□ 0.27
FANCA-231ENST00000568626 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
FANCA-231ENST00000568626 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
FANCA-231ENST00000568626 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
FANCA-231ENST00000568626 RGPD8O14715 1765 aaPredicted RBP16.71■□□□□ 0.27
FANCA-231ENST00000568626 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
FANCA-231ENST00000568626 SLAIN2Q9P270 581 aa16.7■□□□□ 0.26
FANCA-231ENST00000568626 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
FANCA-231ENST00000568626 MYOM1P52179 1685 aa16.69■□□□□ 0.26
FANCA-231ENST00000568626 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
FANCA-231ENST00000568626 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
FANCA-231ENST00000568626 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
FANCA-231ENST00000568626 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
FANCA-231ENST00000568626 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
FANCA-231ENST00000568626 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
FANCA-231ENST00000568626 NHSL1Q5SYE7 1610 aa16.66■□□□□ 0.26
FANCA-231ENST00000568626 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
FANCA-231ENST00000568626 ESCO1Q5FWF5 840 aa16.65■□□□□ 0.26
FANCA-231ENST00000568626 WASHC2AQ641Q2 1341 aa16.65■□□□□ 0.26
FANCA-231ENST00000568626 POLR3AO14802 1390 aaPredicted RBP16.64■□□□□ 0.26
FANCA-231ENST00000568626 AKAP12Q02952 1782 aa16.64■□□□□ 0.25
FANCA-231ENST00000568626 AHDC1Q5TGY3 1603 aaPredicted RBP16.64■□□□□ 0.25
FANCA-231ENST00000568626 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
FANCA-231ENST00000568626 BRINP3Q76B58 766 aa16.64■□□□□ 0.25
FANCA-231ENST00000568626 MON2Q7Z3U7 1717 aa16.63■□□□□ 0.25
FANCA-231ENST00000568626 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
FANCA-231ENST00000568626 ANKRD36BQ8N2N9 1353 aa16.63■□□□□ 0.25
FANCA-231ENST00000568626 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
FANCA-231ENST00000568626 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
FANCA-231ENST00000568626 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
FANCA-231ENST00000568626 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
FANCA-231ENST00000568626 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
FANCA-231ENST00000568626 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
FANCA-231ENST00000568626 BRD4O60885 1362 aaPredicted RBP16.62■□□□□ 0.25
FANCA-231ENST00000568626 CPSF1Q10570 1443 aaKnown RBP16.61■□□□□ 0.25
FANCA-231ENST00000568626 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
FANCA-231ENST00000568626 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
FANCA-231ENST00000568626 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
FANCA-231ENST00000568626 ACEP12821 1306 aa16.6■□□□□ 0.25
FANCA-231ENST00000568626 NRKQ7Z2Y5 1582 aa16.6■□□□□ 0.25
FANCA-231ENST00000568626 PMFBP1Q8TBY8 1022 aa16.59■□□□□ 0.25
FANCA-231ENST00000568626 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
FANCA-231ENST00000568626 A0A1W2PP64 1363 aa16.59■□□□□ 0.25
FANCA-231ENST00000568626 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
FANCA-231ENST00000568626 USP6P35125 1406 aa16.58■□□□□ 0.24
FANCA-231ENST00000568626 PXDNQ92626 1479 aa16.58■□□□□ 0.24
FANCA-231ENST00000568626 PHLPP1O60346 1717 aa16.57■□□□□ 0.24
FANCA-231ENST00000568626 TRPM3Q9HCF6 1732 aaPredicted RBP16.57■□□□□ 0.24
FANCA-231ENST00000568626 KTN1Q86UP2 1357 aaKnown RBP16.57■□□□□ 0.24
FANCA-231ENST00000568626 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
FANCA-231ENST00000568626 FOXO3O43524 673 aa16.56■□□□□ 0.24
FANCA-231ENST00000568626 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
FANCA-231ENST00000568626 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms