RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 GLI3P10071 1580 aa14.99□□□□□ -0.01
KARS-209ENST00000568378 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
KARS-209ENST00000568378 SEPT12Q8IYM1 358 aa14.98□□□□□ -0.01
KARS-209ENST00000568378 E9PCH4 1651 aa14.97□□□□□ -0.01
KARS-209ENST00000568378 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
KARS-209ENST00000568378 NPHP3Q7Z494 1330 aa14.96□□□□□ -0.01
KARS-209ENST00000568378 ADGRL2O95490 1459 aa14.96□□□□□ -0.01
KARS-209ENST00000568378 R3HDM1Q15032 1099 aaKnown RBP14.95□□□□□ -0.02
KARS-209ENST00000568378 KRT27Q7Z3Y8 459 aa14.95□□□□□ -0.02
KARS-209ENST00000568378 IQGAP3Q86VI3 1631 aa14.95□□□□□ -0.02
KARS-209ENST00000568378 CCDC9Q9Y3X0 531 aaKnown RBP14.94□□□□□ -0.02
KARS-209ENST00000568378 SLIT2O94813 1529 aa14.93□□□□□ -0.02
KARS-209ENST00000568378 A0A0G2JS52 829 aa14.93□□□□□ -0.02
KARS-209ENST00000568378 MYT1Q01538 1121 aa14.93□□□□□ -0.02
KARS-209ENST00000568378 XPCQ01831 940 aaPredicted RBP14.93□□□□□ -0.02
KARS-209ENST00000568378 ESCO1Q5FWF5 840 aa14.93□□□□□ -0.02
KARS-209ENST00000568378 PXDNQ92626 1479 aa14.92□□□□□ -0.02
KARS-209ENST00000568378 FOXO3O43524 673 aa14.9□□□□□ -0.02
KARS-209ENST00000568378 EN1Q05925 392 aaPredicted RBP14.9□□□□□ -0.02
KARS-209ENST00000568378 LRPPRCP42704 1394 aaKnown RBP14.89□□□□□ -0.03
KARS-209ENST00000568378 ROBO2Q9HCK4 1378 aa14.89□□□□□ -0.03
KARS-209ENST00000568378 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
KARS-209ENST00000568378 HAP1P54257 671 aaPredicted RBP14.89□□□□□ -0.03
KARS-209ENST00000568378 VPS72Q15906 364 aa14.89□□□□□ -0.03
KARS-209ENST00000568378 APLP2Q06481 763 aa14.88□□□□□ -0.03
KARS-209ENST00000568378 FAM50AQ14320 339 aaKnown RBP14.87□□□□□ -0.03
KARS-209ENST00000568378 USP32Q8NFA0 1604 aa14.87□□□□□ -0.03
KARS-209ENST00000568378 ONECUT3O60422 494 aaPredicted RBP14.86□□□□□ -0.03
KARS-209ENST00000568378 RGPD1P0DJD0 1748 aa14.86□□□□□ -0.03
KARS-209ENST00000568378 IFFO2Q5TF58 517 aa14.85□□□□□ -0.03
KARS-209ENST00000568378 HFM1A2PYH4 1435 aa14.84□□□□□ -0.03
KARS-209ENST00000568378 NUP155O75694 1391 aa14.84□□□□□ -0.03
KARS-209ENST00000568378 NEXMIFQ5QGS0 1516 aa14.83□□□□□ -0.04
KARS-209ENST00000568378 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.04
KARS-209ENST00000568378 PLEKHG5O94827 1062 aa14.83□□□□□ -0.04
KARS-209ENST00000568378 PLCH1Q4KWH8 1693 aa14.82□□□□□ -0.04
KARS-209ENST00000568378 NUTM2FA1L443 756 aa14.82□□□□□ -0.04
KARS-209ENST00000568378 PPP1R1BQ9UD71 204 aaPredicted RBP14.82□□□□□ -0.04
KARS-209ENST00000568378 NWD2Q9ULI1 1742 aa14.82□□□□□ -0.04
KARS-209ENST00000568378 SPATA31A3Q5VYP0 1347 aa14.82□□□□□ -0.04
KARS-209ENST00000568378 SENP3-EIF4A1A0A087X0R7 540 aa14.81□□□□□ -0.04
KARS-209ENST00000568378 EZH2Q15910 746 aaKnown RBP14.81□□□□□ -0.04
KARS-209ENST00000568378 FAM98CQ17RN3 349 aaKnown RBP14.81□□□□□ -0.04
KARS-209ENST00000568378 DISP2A7MBM2 1401 aa14.8□□□□□ -0.04
KARS-209ENST00000568378 CCDC144AA2RUR9 1427 aa14.79□□□□□ -0.04
KARS-209ENST00000568378 FAM182BQ5T319 152 aa14.79□□□□□ -0.04
KARS-209ENST00000568378 PRAG1Q86YV5 1406 aa14.79□□□□□ -0.04
KARS-209ENST00000568378 CABLES1Q8TDN4 633 aa14.78□□□□□ -0.04
KARS-209ENST00000568378 ADGRB2O60241 1585 aa14.77□□□□□ -0.04
KARS-209ENST00000568378 NAIPQ13075 1403 aa14.77□□□□□ -0.04
KARS-209ENST00000568378 VGFO15240 615 aaPredicted RBP14.77□□□□□ -0.05
KARS-209ENST00000568378 KRT28Q7Z3Y7 464 aa14.77□□□□□ -0.05
KARS-209ENST00000568378 TNS1Q9HBL0 1735 aaKnown RBP14.77□□□□□ -0.05
KARS-209ENST00000568378 TNS3Q68CZ2 1445 aa14.75□□□□□ -0.05
KARS-209ENST00000568378 NINLQ9Y2I6 1382 aa14.75□□□□□ -0.05
KARS-209ENST00000568378 KIF1AQ12756 1690 aa14.75□□□□□ -0.05
KARS-209ENST00000568378 LMOD2Q6P5Q4 547 aa14.75□□□□□ -0.05
KARS-209ENST00000568378 CLTCL1P53675 1640 aa14.74□□□□□ -0.05
KARS-209ENST00000568378 CAMKK2Q96RR4 588 aa14.74□□□□□ -0.05
KARS-209ENST00000568378 SPON1Q9HCB6 807 aa14.74□□□□□ -0.05
KARS-209ENST00000568378 PARD3Q8TEW0 1356 aa14.73□□□□□ -0.05
KARS-209ENST00000568378 FAM83GA6ND36 823 aa14.73□□□□□ -0.05
KARS-209ENST00000568378 PSME1Q06323 249 aa14.73□□□□□ -0.05
KARS-209ENST00000568378 NBPF8Q3BBV2 869 aa14.73□□□□□ -0.05
KARS-209ENST00000568378 NBPF14Q5TI25 921 aa14.73□□□□□ -0.05
KARS-209ENST00000568378 ZNF784Q8NCA9 323 aaPredicted RBP14.73□□□□□ -0.05
KARS-209ENST00000568378 KIF1BO60333 1816 aa14.73□□□□□ -0.05
KARS-209ENST00000568378 TRIM37O94972 964 aa14.72□□□□□ -0.05
KARS-209ENST00000568378 APBA3O96018 575 aa14.72□□□□□ -0.05
KARS-209ENST00000568378 BTG4Q9NY30 223 aa14.72□□□□□ -0.05
KARS-209ENST00000568378 ROCK1Q13464 1354 aa14.72□□□□□ -0.05
KARS-209ENST00000568378 NRAPQ86VF7 1730 aa14.71□□□□□ -0.05
KARS-209ENST00000568378 ABCA3Q99758 1704 aa14.71□□□□□ -0.05
KARS-209ENST00000568378 KCNQ2O43526 872 aa14.7□□□□□ -0.06
KARS-209ENST00000568378 ARHGEF10O15013 1369 aa14.7□□□□□ -0.06
KARS-209ENST00000568378 C1QTNF8P60827 252 aa14.69□□□□□ -0.06
KARS-209ENST00000568378 FAM196AQ6ZSG2 479 aa14.69□□□□□ -0.06
KARS-209ENST00000568378 WAPLQ7Z5K2 1190 aa14.69□□□□□ -0.06
KARS-209ENST00000568378 STK26Q9P289 416 aa14.69□□□□□ -0.06
KARS-209ENST00000568378 CAMTA1Q9Y6Y1 1673 aa14.68□□□□□ -0.06
KARS-209ENST00000568378 PHF8Q9UPP1 1060 aa14.68□□□□□ -0.06
KARS-209ENST00000568378 FMN2Q9NZ56 1722 aa14.68□□□□□ -0.06
KARS-209ENST00000568378 SPATA31A5Q5VU36 1347 aa14.67□□□□□ -0.06
KARS-209ENST00000568378 SPATA31A7Q8IWB4 1347 aa14.67□□□□□ -0.06
KARS-209ENST00000568378 SBNO1A3KN83 1393 aa14.67□□□□□ -0.06
KARS-209ENST00000568378 RREB1Q92766 1687 aa14.67□□□□□ -0.06
KARS-209ENST00000568378 THSD7AQ9UPZ6 1657 aa14.67□□□□□ -0.06
KARS-209ENST00000568378 RPGRIP1LQ68CZ1 1315 aa14.66□□□□□ -0.06
KARS-209ENST00000568378 NUP188Q5SRE5 1749 aa14.66□□□□□ -0.06
KARS-209ENST00000568378 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
KARS-209ENST00000568378 COL14A1Q05707 1796 aaKnown RBP14.65□□□□□ -0.06
KARS-209ENST00000568378 PLEKHH1Q9ULM0 1364 aa14.63□□□□□ -0.07
KARS-209ENST00000568378 TECPR2O15040 1411 aa14.63□□□□□ -0.07
KARS-209ENST00000568378 ITGAEP38570 1179 aa14.62□□□□□ -0.07
KARS-209ENST00000568378 RRBP1Q9P2E9 1410 aaKnown RBP14.62□□□□□ -0.07
KARS-209ENST00000568378 PPLO60437 1756 aa14.62□□□□□ -0.07
KARS-209ENST00000568378 NRXN1Q9ULB1 1477 aa14.62□□□□□ -0.07
KARS-209ENST00000568378 RGPD8O14715 1765 aaPredicted RBP14.6□□□□□ -0.07
KARS-209ENST00000568378 PDE3BQ13370 1112 aa14.6□□□□□ -0.07
KARS-209ENST00000568378 IFT172Q9UG01 1749 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms