RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 MOXD2PA6NHM9 499 aa16.01■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 PLA2G2CQ5R387 149 aa16.01■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 FCF1Q9Y324 198 aaKnown RBP16.01■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 NDUFV2P19404 249 aa16■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 LIAT1Q6ZQX7 453 aa16■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 PCDHGC3Q9UN70 934 aa16■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 SYMPKQ92797 1274 aaKnown RBP15.99■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 MMP16P51512 607 aa15.98■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 SPRYD7Q5W111 196 aa15.97■□□□□ 0.15
DNAAF4-CCPG1-202ENST00000568310 C6orf229H3BNL8 230 aa15.95■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 RETREG3Q86VR2 466 aa15.95■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 GFRA3O60609 400 aa15.94■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 DXOO77932 396 aaKnown RBP15.93■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 LAPTM4AQ15012 233 aa15.93■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 ZNF598Q86UK7 904 aaKnown RBP15.93■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 GJA5P36382 358 aa15.92■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 RPIAP49247 311 aa15.91■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
DNAAF4-CCPG1-202ENST00000568310 ZNF697Q5TEC3 545 aa15.89■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 PDZRN3Q9UPQ7 1066 aa15.89■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 SPTLC1O15269 473 aa15.88■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 JUNDP17535 347 aa15.88■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 MTMR2Q13614 643 aa15.87■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 RIC3Q7Z5B4 369 aa15.87■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 GPBP1L1Q9HC44 474 aaPredicted RBP15.87■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 SPDYE5A6NIY4 337 aa15.86■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 ZBTB24O43167 697 aaPredicted RBP15.86■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 CD2BP2O95400 341 aaKnown RBP15.86■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 NRG2O14511 850 aaPredicted RBP15.85■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 MYSM1Q5VVJ2 828 aa15.85■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 KDM4CQ9H3R0 1056 aa15.85■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 PCDHB15Q9Y5E8 787 aa15.85■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 TRIM67Q6ZTA4 783 aa15.84■□□□□ 0.13
DNAAF4-CCPG1-202ENST00000568310 Q6ZNB5 142 aa15.83■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 CCDC24Q8N4L8 307 aa15.83■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 PRR7Q8TB68 274 aa15.82■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 ZBTB3Q9H5J0 574 aa15.8■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 HRCP23327 699 aa15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 PRR20EP86478 221 aa15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 PRR20CP86479 221 aa15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 PRR20DP86480 221 aa15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 PRR20BP86481 221 aa15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 PRR20AP86496 221 aa15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 PRPF38BQ5VTL8 546 aaKnown RBP15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 LIMD1Q9UGP4 676 aa15.79■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 GDF9O60383 454 aa15.78■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 CSPP1Q1MSJ5 1256 aa15.78■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 NUDT12Q9BQG2 462 aa15.78■□□□□ 0.12
DNAAF4-CCPG1-202ENST00000568310 TRIM32Q13049 653 aa15.76■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 TUSC1Q2TAM9 212 aa15.76■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 DESI1Q6ICB0 168 aa15.76■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 DDRGK1Q96HY6 314 aa15.76■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 FAM117AQ9C073 453 aa15.76■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 TNFRSF10AO00220 468 aa15.75■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 FOXC1Q12948 553 aa15.75■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 TPRNQ4KMQ1 711 aa15.75■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 CABLES1Q8TDN4 633 aa15.75■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 CLK2P49760 499 aaKnown RBP15.74■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 PTPRNQ16849 979 aa15.74■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 CCNYL3P0C7X3 344 aa15.73■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 POLR3EQ9NVU0 708 aa15.73■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 CFAP99D6REC4 459 aa15.72■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 QPCTQ16769 361 aa15.72■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 NUTM2BA6NNL0 878 aaPredicted RBP15.71■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 NUTM2EB1AL46 878 aaPredicted RBP15.71■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 NUTM2DQ5VT03 806 aaPredicted RBP15.71■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 NUTM2AQ8IVF1 878 aaPredicted RBP15.71■□□□□ 0.11
DNAAF4-CCPG1-202ENST00000568310 PTCRAQ6ISU1 281 aaPredicted RBP15.7■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 LILRB3O75022 631 aa15.69■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 EVA1BQ9NVM1 165 aa15.68■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 PLEKHG3A1L390 1219 aa15.67■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 NEUROD2Q15784 382 aa15.67■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 SKIV2LQ15477 1246 aaKnown RBP15.66■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 SH3D19Q5HYK7 790 aa15.66■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 TRAF7Q6Q0C0 670 aa15.66■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 LYPD8Q6UX82 237 aa15.66■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 WNT7AO00755 349 aa15.65■□□□□ 0.1
DNAAF4-CCPG1-202ENST00000568310 KCNH2Q12809 1159 aa15.64■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 WNT7BP56706 349 aa15.63■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 PKDCCQ504Y2 493 aa15.63■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 TSC1Q92574 1164 aa15.63■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 LCE2BO14633 110 aa15.62■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 DGAT1O75907 488 aa15.62■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 SKOR1P84550 965 aa15.62■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 CYP4X1Q8N118 509 aa15.62■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 UNC93B1Q9H1C4 597 aa15.62■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 FAM187AA6NFU0 413 aa15.61■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 TOR4AQ9NXH8 423 aa15.61■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 CTHP32929 405 aa15.59■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 RC3H1Q5TC82 1133 aaKnown RBP15.59■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 PROCA1Q8NCQ7 364 aaPredicted RBP15.59■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 MRGPRX2Q96LB1 330 aa15.59■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 ATP1B4Q9UN42 357 aaPredicted RBP15.59■□□□□ 0.09
DNAAF4-CCPG1-202ENST00000568310 BRPF1P55201 1214 aaPredicted RBP15.58■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 HELBQ8NG08 1087 aaPredicted RBP15.58■□□□□ 0.08
DNAAF4-CCPG1-202ENST00000568310 PER1O15534 1290 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms