RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 HLA-CQ95604 372 aa9.41□□□□□ -0.9
CAPN3-217ENST00000567817 SLC6A16Q9GZN6 736 aa9.41□□□□□ -0.9
CAPN3-217ENST00000567817 KDM4CQ9H3R0 1056 aa9.41□□□□□ -0.9
CAPN3-217ENST00000567817 S1PR4O95977 384 aa9.4□□□□□ -0.9
CAPN3-217ENST00000567817 RNF19BQ6ZMZ0 732 aa9.4□□□□□ -0.9
CAPN3-217ENST00000567817 TBC1D2Q9BYX2 928 aa9.4□□□□□ -0.9
CAPN3-217ENST00000567817 GPBP1L1Q9HC44 474 aaPredicted RBP9.4□□□□□ -0.9
CAPN3-217ENST00000567817 FDX1P10109 184 aa9.39□□□□□ -0.91
CAPN3-217ENST00000567817 GJA5P36382 358 aa9.39□□□□□ -0.91
CAPN3-217ENST00000567817 GUCA2AQ02747 115 aa9.39□□□□□ -0.91
CAPN3-217ENST00000567817 MSS51Q4VC12 460 aa9.39□□□□□ -0.91
CAPN3-217ENST00000567817 MOXD2PA6NHM9 499 aa9.38□□□□□ -0.91
CAPN3-217ENST00000567817 RNF223E7ERA6 249 aa9.37□□□□□ -0.91
CAPN3-217ENST00000567817 DDRGK1Q96HY6 314 aa9.37□□□□□ -0.91
CAPN3-217ENST00000567817 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
CAPN3-217ENST00000567817 HMGXB3Q12766 1538 aa9.36□□□□□ -0.91
CAPN3-217ENST00000567817 NDUFV2P19404 249 aa9.36□□□□□ -0.91
CAPN3-217ENST00000567817 RSBN1LQ6PCB5 846 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-217ENST00000567817 FAM160A2Q8N612 972 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-217ENST00000567817 ANKLE1Q8NAG6 615 aa9.36□□□□□ -0.91
CAPN3-217ENST00000567817 USB1Q9BQ65 265 aaKnown RBP9.36□□□□□ -0.91
CAPN3-217ENST00000567817 RETREG3Q86VR2 466 aa9.35□□□□□ -0.91
CAPN3-217ENST00000567817 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
CAPN3-217ENST00000567817 SPTLC1O15269 473 aa9.34□□□□□ -0.91
CAPN3-217ENST00000567817 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.91
CAPN3-217ENST00000567817 RSPH6AQ9H0K4 717 aa9.34□□□□□ -0.91
CAPN3-217ENST00000567817 SMARCA2P51531 1590 aa9.33□□□□□ -0.92
CAPN3-217ENST00000567817 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
CAPN3-217ENST00000567817 PRDM9Q9NQV7 894 aa9.33□□□□□ -0.92
CAPN3-217ENST00000567817 C6orf229H3BNL8 230 aa9.32□□□□□ -0.92
CAPN3-217ENST00000567817 MMP16P51512 607 aa9.32□□□□□ -0.92
CAPN3-217ENST00000567817 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
CAPN3-217ENST00000567817 RIC3Q7Z5B4 369 aa9.32□□□□□ -0.92
CAPN3-217ENST00000567817 FAM117AQ9C073 453 aa9.32□□□□□ -0.92
CAPN3-217ENST00000567817 V9GY48 417 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-217ENST00000567817 SPDYE5A6NIY4 337 aa9.31□□□□□ -0.92
CAPN3-217ENST00000567817 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-217ENST00000567817 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
CAPN3-217ENST00000567817 MTMR2Q13614 643 aa9.31□□□□□ -0.92
CAPN3-217ENST00000567817 SYMPKQ92797 1274 aaKnown RBP9.31□□□□□ -0.92
CAPN3-217ENST00000567817 PRKD2Q9BZL6 878 aa9.31□□□□□ -0.92
CAPN3-217ENST00000567817 ATAD2BQ9ULI0 1458 aa9.31□□□□□ -0.92
CAPN3-217ENST00000567817 LAMC3Q9Y6N6 1575 aa9.31□□□□□ -0.92
CAPN3-217ENST00000567817 DXOO77932 396 aaKnown RBP9.3□□□□□ -0.92
CAPN3-217ENST00000567817 PRPF38BQ5VTL8 546 aaKnown RBP9.3□□□□□ -0.92
CAPN3-217ENST00000567817 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
CAPN3-217ENST00000567817 JUNDP17535 347 aa9.29□□□□□ -0.92
CAPN3-217ENST00000567817 CLK2P49760 499 aaKnown RBP9.29□□□□□ -0.92
CAPN3-217ENST00000567817 SH3D19Q5HYK7 790 aa9.29□□□□□ -0.92
CAPN3-217ENST00000567817 ZBTB3Q9H5J0 574 aa9.29□□□□□ -0.92
CAPN3-217ENST00000567817 FCF1Q9Y324 198 aaKnown RBP9.29□□□□□ -0.92
CAPN3-217ENST00000567817 NESP48681 1621 aa9.28□□□□□ -0.92
CAPN3-217ENST00000567817 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
CAPN3-217ENST00000567817 LIMD1Q9UGP4 676 aa9.28□□□□□ -0.92
CAPN3-217ENST00000567817 PCDHB15Q9Y5E8 787 aa9.28□□□□□ -0.92
CAPN3-217ENST00000567817 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.93
CAPN3-217ENST00000567817 HRCP23327 699 aa9.26□□□□□ -0.93
CAPN3-217ENST00000567817 SLC19A1P41440 591 aa9.26□□□□□ -0.93
CAPN3-217ENST00000567817 SKIV2LQ15477 1246 aaKnown RBP9.26□□□□□ -0.93
CAPN3-217ENST00000567817 PLA2G2CQ5R387 149 aa9.26□□□□□ -0.93
CAPN3-217ENST00000567817 CSPP1Q1MSJ5 1256 aa9.25□□□□□ -0.93
CAPN3-217ENST00000567817 DESI1Q6ICB0 168 aa9.25□□□□□ -0.93
CAPN3-217ENST00000567817 PRR7Q8TB68 274 aa9.25□□□□□ -0.93
CAPN3-217ENST00000567817 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
CAPN3-217ENST00000567817 RPIAP49247 311 aa9.24□□□□□ -0.93
CAPN3-217ENST00000567817 POLR3EQ9NVU0 708 aa9.24□□□□□ -0.93
CAPN3-217ENST00000567817 LILRB3O75022 631 aa9.23□□□□□ -0.93
CAPN3-217ENST00000567817 QPCTQ16769 361 aa9.23□□□□□ -0.93
CAPN3-217ENST00000567817 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
CAPN3-217ENST00000567817 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
CAPN3-217ENST00000567817 GOPCQ9HD26 462 aa9.23□□□□□ -0.93
CAPN3-217ENST00000567817 PTPRNQ16849 979 aa9.22□□□□□ -0.93
CAPN3-217ENST00000567817 SPRYD7Q5W111 196 aa9.22□□□□□ -0.93
CAPN3-217ENST00000567817 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.93
CAPN3-217ENST00000567817 BAZ1AQ9NRL2 1556 aaPredicted RBP9.21□□□□□ -0.93
CAPN3-217ENST00000567817 NUTM2BA6NNL0 878 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-217ENST00000567817 NUTM2EB1AL46 878 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-217ENST00000567817 CFAP99D6REC4 459 aa9.21□□□□□ -0.94
CAPN3-217ENST00000567817 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-217ENST00000567817 NUTM2AQ8IVF1 878 aaPredicted RBP9.21□□□□□ -0.94
CAPN3-217ENST00000567817 NUDT12Q9BQG2 462 aa9.21□□□□□ -0.94
CAPN3-217ENST00000567817 ZBTB24O43167 697 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-217ENST00000567817 ZNF598Q86UK7 904 aaKnown RBP9.2□□□□□ -0.94
CAPN3-217ENST00000567817 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.2□□□□□ -0.94
CAPN3-217ENST00000567817 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
CAPN3-217ENST00000567817 SMARCA4P51532 1647 aa9.2□□□□□ -0.94
CAPN3-217ENST00000567817 CCNYL3P0C7X3 344 aa9.19□□□□□ -0.94
CAPN3-217ENST00000567817 CCDC24Q8N4L8 307 aa9.19□□□□□ -0.94
CAPN3-217ENST00000567817 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
CAPN3-217ENST00000567817 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
CAPN3-217ENST00000567817 WDR62O43379 1518 aa9.19□□□□□ -0.94
CAPN3-217ENST00000567817 KIF21AQ7Z4S6 1674 aa9.19□□□□□ -0.94
CAPN3-217ENST00000567817 ZNF697Q5TEC3 545 aa9.18□□□□□ -0.94
CAPN3-217ENST00000567817 PEG3Q9GZU2 1588 aa9.18□□□□□ -0.94
CAPN3-217ENST00000567817 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
CAPN3-217ENST00000567817 PPP2R2DQ66LE6 453 aa9.17□□□□□ -0.94
CAPN3-217ENST00000567817 LYPD8Q6UX82 237 aa9.17□□□□□ -0.94
CAPN3-217ENST00000567817 PROCA1Q8NCQ7 364 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-217ENST00000567817 HELBQ8NG08 1087 aaPredicted RBP9.17□□□□□ -0.94
CAPN3-217ENST00000567817 RTL5Q5HYW3 569 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms