RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TRIM6-TRIM34B2RNG4 842 aa8.66□□□□□ -1.02
SF3B3-210ENST00000567654 SMAPO00193 183 aa8.66□□□□□ -1.02
SF3B3-210ENST00000567654 CERKQ8TCT0 537 aa8.66□□□□□ -1.02
SF3B3-210ENST00000567654 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
SF3B3-210ENST00000567654 ATP10BO94823 1461 aa8.65□□□□□ -1.02
SF3B3-210ENST00000567654 CCDC102AQ96A19 550 aa8.65□□□□□ -1.02
SF3B3-210ENST00000567654 KIAA1468Q9P260 1216 aa8.65□□□□□ -1.02
SF3B3-210ENST00000567654 VPS9D1Q9Y2B5 631 aa8.65□□□□□ -1.02
SF3B3-210ENST00000567654 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.03
SF3B3-210ENST00000567654 TCOF1Q13428 1488 aaKnown RBP8.64□□□□□ -1.03
SF3B3-210ENST00000567654 MAP2K5Q13163 448 aa8.64□□□□□ -1.03
SF3B3-210ENST00000567654 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
SF3B3-210ENST00000567654 NLRP7Q8WX94 980 aa8.64□□□□□ -1.03
SF3B3-210ENST00000567654 GCC2Q8IWJ2 1684 aa8.64□□□□□ -1.03
SF3B3-210ENST00000567654 ABCC2Q92887 1545 aa8.64□□□□□ -1.03
SF3B3-210ENST00000567654 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
SF3B3-210ENST00000567654 SEPT9Q9UHD8 586 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-210ENST00000567654 PTPRGP23470 1445 aa8.63□□□□□ -1.03
SF3B3-210ENST00000567654 TROQ12816 1431 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-210ENST00000567654 PTPRKQ15262 1439 aa8.63□□□□□ -1.03
SF3B3-210ENST00000567654 IRF6O14896 467 aa8.62□□□□□ -1.03
SF3B3-210ENST00000567654 ITGAEP38570 1179 aa8.62□□□□□ -1.03
SF3B3-210ENST00000567654 ADGRD1Q6QNK2 874 aa8.62□□□□□ -1.03
SF3B3-210ENST00000567654 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
SF3B3-210ENST00000567654 ADGRG1Q9Y653 693 aa8.62□□□□□ -1.03
SF3B3-210ENST00000567654 ADGBQ8N7X0 1667 aa8.62□□□□□ -1.03
SF3B3-210ENST00000567654 DNMT1P26358 1616 aaKnown RBP8.62□□□□□ -1.03
SF3B3-210ENST00000567654 PREX2Q70Z35 1606 aa8.62□□□□□ -1.03
SF3B3-210ENST00000567654 TTC37Q6PGP7 1564 aa8.61□□□□□ -1.03
SF3B3-210ENST00000567654 MYO5CQ9NQX4 1742 aa8.61□□□□□ -1.03
SF3B3-210ENST00000567654 FAM50AQ14320 339 aaKnown RBP8.61□□□□□ -1.03
SF3B3-210ENST00000567654 TATDN2Q93075 761 aa8.61□□□□□ -1.03
SF3B3-210ENST00000567654 PHOX2BQ99453 314 aa8.61□□□□□ -1.03
SF3B3-210ENST00000567654 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
SF3B3-210ENST00000567654 ABCC10Q5T3U5 1492 aa8.61□□□□□ -1.03
SF3B3-210ENST00000567654 UACAQ9BZF9 1416 aa8.61□□□□□ -1.03
SF3B3-210ENST00000567654 KDM6BO15054 1643 aa8.61□□□□□ -1.03
SF3B3-210ENST00000567654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.61□□□□□ -1.03
SF3B3-210ENST00000567654 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-210ENST00000567654 PACS2Q86VP3 889 aa8.6□□□□□ -1.03
SF3B3-210ENST00000567654 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
SF3B3-210ENST00000567654 SLC4A5Q9BY07 1137 aa8.59□□□□□ -1.03
SF3B3-210ENST00000567654 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
SF3B3-210ENST00000567654 NBPF26B4DH59 902 aa8.58□□□□□ -1.04
SF3B3-210ENST00000567654 METTL3Q86U44 580 aaKnown RBP8.58□□□□□ -1.04
SF3B3-210ENST00000567654 AK7Q96M32 723 aa8.58□□□□□ -1.04
SF3B3-210ENST00000567654 GPATCH8Q9UKJ3 1502 aaKnown RBP8.58□□□□□ -1.04
SF3B3-210ENST00000567654 DHX57Q6P158 1386 aaKnown RBP8.58□□□□□ -1.04
SF3B3-210ENST00000567654 RAB3GAP2Q9H2M9 1393 aa8.58□□□□□ -1.04
SF3B3-210ENST00000567654 UHRF1BP1LA0JNW5 1464 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 MIA2Q96PC5 1412 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
SF3B3-210ENST00000567654 TK2O00142 265 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 TRIM66O15016 1216 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 HRO43593 1189 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 PXYLP1Q8TE99 480 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 EYA1Q99502 592 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 MAPKBP1O60336 1514 aa8.57□□□□□ -1.04
SF3B3-210ENST00000567654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.57□□□□□ -1.042e-7■□□□□ 10.7
SF3B3-210ENST00000567654 SAMD9LQ8IVG5 1584 aa8.56□□□□□ -1.04
SF3B3-210ENST00000567654 KDM5BQ9UGL1 1544 aa8.56□□□□□ -1.04
SF3B3-210ENST00000567654 SETD5Q9C0A6 1442 aa8.55□□□□□ -1.04
SF3B3-210ENST00000567654 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-210ENST00000567654 ZEB1P37275 1124 aaPredicted RBP8.55□□□□□ -1.04
SF3B3-210ENST00000567654 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
SF3B3-210ENST00000567654 ZNF644Q9H582 1327 aaPredicted RBP8.54□□□□□ -1.04
SF3B3-210ENST00000567654 RCCD1A6NED2 376 aa8.54□□□□□ -1.04
SF3B3-210ENST00000567654 DAPK1P53355 1430 aa8.54□□□□□ -1.04
SF3B3-210ENST00000567654 NAIPQ13075 1403 aa8.54□□□□□ -1.04
SF3B3-210ENST00000567654 OATP04181 439 aa8.53□□□□□ -1.04
SF3B3-210ENST00000567654 MDM2Q00987 491 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-210ENST00000567654 MRPL50Q8N5N7 158 aaKnown RBP8.53□□□□□ -1.04
SF3B3-210ENST00000567654 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
SF3B3-210ENST00000567654 NBPF3Q9H094 633 aa8.53□□□□□ -1.04
SF3B3-210ENST00000567654 CDK11AQ9UQ88 783 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-210ENST00000567654 HFM1A2PYH4 1435 aa8.53□□□□□ -1.04
SF3B3-210ENST00000567654 ABCC5O15440 1437 aa8.53□□□□□ -1.04
SF3B3-210ENST00000567654 RIMBP3CA6NJZ7 1639 aa8.52□□□□□ -1.05
SF3B3-210ENST00000567654 RIMBP3BA6NNM3 1639 aa8.52□□□□□ -1.05
SF3B3-210ENST00000567654 RIMBP3Q9UFD9 1639 aa8.52□□□□□ -1.05
SF3B3-210ENST00000567654 PDE4DQ08499 809 aa8.52□□□□□ -1.05
SF3B3-210ENST00000567654 STAC3Q96MF2 364 aa8.52□□□□□ -1.05
SF3B3-210ENST00000567654 GPBP1L1Q9HC44 474 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-210ENST00000567654 FAM98CQ17RN3 349 aaKnown RBP8.51□□□□□ -1.05
SF3B3-210ENST00000567654 ARHGEF5Q12774 1597 aa8.51□□□□□ -1.05
SF3B3-210ENST00000567654 PLEKHD1A6NEE1 506 aa8.5□□□□□ -1.05
SF3B3-210ENST00000567654 TTLL12Q14166 644 aaPredicted RBP8.5□□□□□ -1.05
SF3B3-210ENST00000567654 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
SF3B3-210ENST00000567654 SAMD7Q7Z3H4 446 aa8.5□□□□□ -1.05
SF3B3-210ENST00000567654 AKNAQ7Z591 1439 aa8.5□□□□□ -1.05
SF3B3-210ENST00000567654 ZFRQ96KR1 1074 aaKnown RBP8.5□□□□□ -1.05
SF3B3-210ENST00000567654 ABCA9Q8IUA7 1624 aa8.5□□□□□ -1.05
SF3B3-210ENST00000567654 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
SF3B3-210ENST00000567654 DNAJB2P25686 324 aa8.49□□□□□ -1.05
SF3B3-210ENST00000567654 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
SF3B3-210ENST00000567654 PARP9Q8IXQ6 854 aa8.49□□□□□ -1.05
SF3B3-210ENST00000567654 CHIC2Q9UKJ5 165 aa8.49□□□□□ -1.05
SF3B3-210ENST00000567654 DENND4BO75064 1496 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-210ENST00000567654 ARHGAP5Q13017 1502 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms