RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 IFT172Q9UG01 1749 aa22.69■■□□□ 1.22
CDR2-206ENST00000567406 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
CDR2-206ENST00000567406 PLEKHH1Q9ULM0 1364 aa22.69■■□□□ 1.22
CDR2-206ENST00000567406 SOS2Q07890 1332 aaPredicted RBP22.69■■□□□ 1.22
CDR2-206ENST00000567406 XPCQ01831 940 aaPredicted RBP22.68■■□□□ 1.22
CDR2-206ENST00000567406 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
CDR2-206ENST00000567406 QTRT2Q9H974 415 aaKnown RBP22.66■■□□□ 1.22
CDR2-206ENST00000567406 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
CDR2-206ENST00000567406 NGLY1Q96IV0 654 aa22.65■■□□□ 1.22
CDR2-206ENST00000567406 LAMC1P11047 1609 aa22.64■■□□□ 1.22
CDR2-206ENST00000567406 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.22
CDR2-206ENST00000567406 FOXO3O43524 673 aa22.64■■□□□ 1.21
CDR2-206ENST00000567406 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
CDR2-206ENST00000567406 UPF1Q92900 1129 aaKnown RBP eCLIP22.63■■□□□ 1.21
CDR2-206ENST00000567406 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
CDR2-206ENST00000567406 TECPR2O15040 1411 aa22.62■■□□□ 1.21
CDR2-206ENST00000567406 CDC42BPGQ6DT37 1551 aa22.62■■□□□ 1.21
CDR2-206ENST00000567406 YTHDC2Q9H6S0 1430 aaKnown RBP22.61■■□□□ 1.21
CDR2-206ENST00000567406 C14orf93Q9H972 538 aaKnown RBP22.6■■□□□ 1.21
CDR2-206ENST00000567406 NPHP3Q7Z494 1330 aa22.59■■□□□ 1.21
CDR2-206ENST00000567406 SAFB2Q14151 953 aaKnown RBP eCLIP22.59■■□□□ 1.21
CDR2-206ENST00000567406 RBM6P78332 1123 aaKnown RBP22.57■■□□□ 1.2
CDR2-206ENST00000567406 PXDNQ92626 1479 aa22.57■■□□□ 1.2
CDR2-206ENST00000567406 KNDC1Q76NI1 1749 aa22.57■■□□□ 1.2
CDR2-206ENST00000567406 USP21Q9UK80 565 aa22.56■■□□□ 1.2
CDR2-206ENST00000567406 RGS12O14924 1447 aa22.56■■□□□ 1.2
CDR2-206ENST00000567406 CDK12Q9NYV4 1490 aaPredicted RBP22.54■■□□□ 1.2
CDR2-206ENST00000567406 KDM2AQ9Y2K7 1162 aa22.54■■□□□ 1.2
CDR2-206ENST00000567406 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
CDR2-206ENST00000567406 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
CDR2-206ENST00000567406 PRAM1Q96QH2 718 aa22.53■■□□□ 1.2
CDR2-206ENST00000567406 ACIN1Q9UKV3 1341 aaKnown RBP22.53■■□□□ 1.2
CDR2-206ENST00000567406 FMN2Q9NZ56 1722 aa22.52■■□□□ 1.2
CDR2-206ENST00000567406 COL22A1Q8NFW1 1626 aaPredicted RBP22.52■■□□□ 1.2
CDR2-206ENST00000567406 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
CDR2-206ENST00000567406 FNBP4Q8N3X1 1017 aaPredicted RBP22.51■■□□□ 1.19
CDR2-206ENST00000567406 SIRT1Q96EB6 747 aa22.51■■□□□ 1.19
CDR2-206ENST00000567406 MYOM2P54296 1465 aa22.51■■□□□ 1.19
CDR2-206ENST00000567406 KRT28Q7Z3Y7 464 aa22.5■■□□□ 1.19
CDR2-206ENST00000567406 RGPD8O14715 1765 aaPredicted RBP22.5■■□□□ 1.19
CDR2-206ENST00000567406 TRPC5Q9UL62 973 aaPredicted RBP22.49■■□□□ 1.19
CDR2-206ENST00000567406 DCAF11Q8TEB1 546 aa22.48■■□□□ 1.19
CDR2-206ENST00000567406 POGKQ9P215 609 aa22.48■■□□□ 1.19
CDR2-206ENST00000567406 TRAK1Q9UPV9 953 aa22.48■■□□□ 1.19
CDR2-206ENST00000567406 PHF8Q9UPP1 1060 aa22.47■■□□□ 1.19
CDR2-206ENST00000567406 SPATA31A3Q5VYP0 1347 aa22.47■■□□□ 1.19
CDR2-206ENST00000567406 HIRIP3Q9BW71 556 aaPredicted RBP22.46■■□□□ 1.19
CDR2-206ENST00000567406 ATRNO75882 1429 aa22.45■■□□□ 1.18
CDR2-206ENST00000567406 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
CDR2-206ENST00000567406 PMFBP1Q8TBY8 1022 aa22.44■■□□□ 1.18
CDR2-206ENST00000567406 CABLES1Q8TDN4 633 aa22.44■■□□□ 1.18
CDR2-206ENST00000567406 MINK1Q8N4C8 1332 aaPredicted RBP22.42■■□□□ 1.18
CDR2-206ENST00000567406 LMOD2Q6P5Q4 547 aa22.42■■□□□ 1.18
CDR2-206ENST00000567406 KIF1AQ12756 1690 aa22.42■■□□□ 1.18
CDR2-206ENST00000567406 MARF1Q9Y4F3 1742 aaKnown RBP22.41■■□□□ 1.18
CDR2-206ENST00000567406 ADGRB1O14514 1584 aa22.41■■□□□ 1.18
CDR2-206ENST00000567406 PSME1Q06323 249 aa22.4■■□□□ 1.18
CDR2-206ENST00000567406 DLC1Q96QB1 1528 aa22.38■■□□□ 1.17
CDR2-206ENST00000567406 HAP1P54257 671 aaPredicted RBP22.38■■□□□ 1.17
CDR2-206ENST00000567406 GJD4Q96KN9 370 aaPredicted RBP22.37■■□□□ 1.17
CDR2-206ENST00000567406 USP32Q8NFA0 1604 aa22.37■■□□□ 1.17
CDR2-206ENST00000567406 HRCP23327 699 aa22.36■■□□□ 1.17
CDR2-206ENST00000567406 TNS3Q68CZ2 1445 aa22.36■■□□□ 1.17
CDR2-206ENST00000567406 UNC5CLQ8IV45 518 aa22.35■■□□□ 1.17
CDR2-206ENST00000567406 PRR36Q9H6K5 1346 aa22.34■■□□□ 1.17
CDR2-206ENST00000567406 EP400Q96L91 3159 aa22.34■■□□□ 1.17
CDR2-206ENST00000567406 ATAD2Q6PL18 1390 aa22.34■■□□□ 1.17
CDR2-206ENST00000567406 SLIT2O94813 1529 aa22.32■■□□□ 1.16
CDR2-206ENST00000567406 SBNO1A3KN83 1393 aa22.32■■□□□ 1.16
CDR2-206ENST00000567406 ANKARQ7Z5J8 1434 aa22.31■■□□□ 1.16
CDR2-206ENST00000567406 WASLO00401 505 aaPredicted RBP22.31■■□□□ 1.16
CDR2-206ENST00000567406 ADGRB2O60241 1585 aa22.3■■□□□ 1.16
CDR2-206ENST00000567406 RALGAPBQ86X10 1494 aa22.3■■□□□ 1.16
CDR2-206ENST00000567406 FAM83GA6ND36 823 aa22.29■■□□□ 1.16
CDR2-206ENST00000567406 GLI3P10071 1580 aa22.29■■□□□ 1.16
CDR2-206ENST00000567406 ARHGEF10O15013 1369 aa22.27■■□□□ 1.16
CDR2-206ENST00000567406 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.27■■□□□ 1.16
CDR2-206ENST00000567406 CCDC9Q9Y3X0 531 aaKnown RBP22.27■■□□□ 1.16
CDR2-206ENST00000567406 NGDNQ8NEJ9 315 aaKnown RBP22.26■■□□□ 1.15
CDR2-206ENST00000567406 STAC3Q96MF2 364 aa22.26■■□□□ 1.15
CDR2-206ENST00000567406 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
CDR2-206ENST00000567406 ABCA3Q99758 1704 aa22.26■■□□□ 1.15
CDR2-206ENST00000567406 PAK3O75914 559 aaPredicted RBP22.25■■□□□ 1.15
CDR2-206ENST00000567406 TRPM3Q9HCF6 1732 aaPredicted RBP22.25■■□□□ 1.15
CDR2-206ENST00000567406 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
CDR2-206ENST00000567406 ARHGEF28Q8N1W1 1705 aaKnown RBP22.23■■□□□ 1.15
CDR2-206ENST00000567406 VPS72Q15906 364 aa22.23■■□□□ 1.15
CDR2-206ENST00000567406 NBPF1Q3BBV0 1214 aa22.23■■□□□ 1.15
CDR2-206ENST00000567406 SEPT12Q8IYM1 358 aa22.23■■□□□ 1.15
CDR2-206ENST00000567406 NUDT16Q96DE0 195 aaKnown RBP22.23■■□□□ 1.15
CDR2-206ENST00000567406 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
CDR2-206ENST00000567406 SRCAPQ6ZRS2 3230 aa22.23■■□□□ 1.15
CDR2-206ENST00000567406 CDK19Q9BWU1 502 aa22.22■■□□□ 1.15
CDR2-206ENST00000567406 EIF3AQ14152 1382 aaKnown RBP22.22■■□□□ 1.15
CDR2-206ENST00000567406 BRWD3Q6RI45 1802 aa22.21■■□□□ 1.15
CDR2-206ENST00000567406 BTG4Q9NY30 223 aa22.2■■□□□ 1.14
CDR2-206ENST00000567406 ALS2Q96Q42 1657 aa22.2■■□□□ 1.14
CDR2-206ENST00000567406 NUTM2GQ5VZR2 741 aa22.18■■□□□ 1.14
CDR2-206ENST00000567406 NWD2Q9ULI1 1742 aa22.17■■□□□ 1.14
CDR2-206ENST00000567406 ATP7BP35670 1465 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms