RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 HLA-CQ95604 372 aa8.73□□□□□ -1.01
CDH1-211ENST00000567320 MSS51Q4VC12 460 aa8.72□□□□□ -1.01
CDH1-211ENST00000567320 USB1Q9BQ65 265 aaKnown RBP8.72□□□□□ -1.01
CDH1-211ENST00000567320 FAM217BQ9NTX9 383 aaPredicted RBP8.72□□□□□ -1.01
CDH1-211ENST00000567320 HOXA2O43364 376 aa8.71□□□□□ -1.02
CDH1-211ENST00000567320 GDF9O60383 454 aa8.71□□□□□ -1.02
CDH1-211ENST00000567320 DGAT1O75907 488 aa8.71□□□□□ -1.02
CDH1-211ENST00000567320 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
CDH1-211ENST00000567320 CCDC24Q8N4L8 307 aa8.71□□□□□ -1.02
CDH1-211ENST00000567320 GUCA2AQ02747 115 aa8.7□□□□□ -1.02
CDH1-211ENST00000567320 ZC3H15Q8WU90 426 aaKnown RBP8.69□□□□□ -1.02
CDH1-211ENST00000567320 ZMYND10O75800 440 aa8.68□□□□□ -1.02
CDH1-211ENST00000567320 SSTR3P32745 418 aaPredicted RBP8.68□□□□□ -1.02
CDH1-211ENST00000567320 BARGINQ6ZT62 677 aa8.68□□□□□ -1.02
CDH1-211ENST00000567320 CYP4X1Q8N118 509 aa8.68□□□□□ -1.02
CDH1-211ENST00000567320 PKD2L1Q9P0L9 805 aa8.68□□□□□ -1.02
CDH1-211ENST00000567320 MYT1Q01538 1121 aa8.67□□□□□ -1.02
CDH1-211ENST00000567320 SYMPKQ92797 1274 aaKnown RBP8.67□□□□□ -1.02
CDH1-211ENST00000567320 REPIN1Q9BWE0 567 aaKnown RBP8.66□□□□□ -1.02
CDH1-211ENST00000567320 TTC24A2A3L6 582 aaPredicted RBP8.65□□□□□ -1.02
CDH1-211ENST00000567320 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
CDH1-211ENST00000567320 MMP16P51512 607 aa8.65□□□□□ -1.02
CDH1-211ENST00000567320 DXOO77932 396 aaKnown RBP8.64□□□□□ -1.03
CDH1-211ENST00000567320 FDX1P10109 184 aa8.64□□□□□ -1.03
CDH1-211ENST00000567320 TRIM32Q13049 653 aa8.64□□□□□ -1.03
CDH1-211ENST00000567320 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
CDH1-211ENST00000567320 ST8SIA5O15466 376 aa8.62□□□□□ -1.03
CDH1-211ENST00000567320 JUNDP17535 347 aa8.61□□□□□ -1.03
CDH1-211ENST00000567320 NDUFV2P19404 249 aa8.61□□□□□ -1.03
CDH1-211ENST00000567320 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
CDH1-211ENST00000567320 SPIRE2Q8WWL2 714 aa8.61□□□□□ -1.03
CDH1-211ENST00000567320 AMHR2Q16671 573 aa8.6□□□□□ -1.03
CDH1-211ENST00000567320 BEGAINQ9BUH8 593 aa8.6□□□□□ -1.03
CDH1-211ENST00000567320 TOR4AQ9NXH8 423 aa8.6□□□□□ -1.03
CDH1-211ENST00000567320 NUDT12Q9BQG2 462 aa8.59□□□□□ -1.03
CDH1-211ENST00000567320 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
CDH1-211ENST00000567320 MOXD2PA6NHM9 499 aa8.58□□□□□ -1.04
CDH1-211ENST00000567320 WNT7AO00755 349 aa8.58□□□□□ -1.04
CDH1-211ENST00000567320 MRGPRX2Q96LB1 330 aa8.58□□□□□ -1.04
CDH1-211ENST00000567320 AK7Q96M32 723 aa8.58□□□□□ -1.04
CDH1-211ENST00000567320 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
CDH1-211ENST00000567320 TRIM66O15016 1216 aa8.57□□□□□ -1.04
CDH1-211ENST00000567320 SNIP1Q8TAD8 396 aaKnown RBP8.57□□□□□ -1.04
CDH1-211ENST00000567320 POTECB2RU33 542 aa8.56□□□□□ -1.04
CDH1-211ENST00000567320 AXIN1O15169 862 aa8.56□□□□□ -1.04
CDH1-211ENST00000567320 MS4A1P11836 297 aa8.56□□□□□ -1.04
CDH1-211ENST00000567320 PARP9Q8IXQ6 854 aa8.56□□□□□ -1.04
CDH1-211ENST00000567320 RC3H1Q5TC82 1133 aaKnown RBP8.55□□□□□ -1.04
CDH1-211ENST00000567320 TBC1D2Q9BYX2 928 aa8.55□□□□□ -1.04
CDH1-211ENST00000567320 MTMR2Q13614 643 aa8.54□□□□□ -1.04
CDH1-211ENST00000567320 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
CDH1-211ENST00000567320 PRR7Q8TB68 274 aa8.54□□□□□ -1.04
CDH1-211ENST00000567320 ZNF775Q96BV0 537 aaPredicted RBP8.54□□□□□ -1.04
CDH1-211ENST00000567320 J3QL48 77 aa8.53□□□□□ -1.04
CDH1-211ENST00000567320 CCNYL3P0C7X3 344 aa8.53□□□□□ -1.04
CDH1-211ENST00000567320 WNT7BP56706 349 aa8.53□□□□□ -1.04
CDH1-211ENST00000567320 PTCRAQ6ISU1 281 aaPredicted RBP8.53□□□□□ -1.04
CDH1-211ENST00000567320 AVPP01185 164 aa8.52□□□□□ -1.05
CDH1-211ENST00000567320 SMPD1P17405 629 aa8.52□□□□□ -1.05
CDH1-211ENST00000567320 SKOR1P84550 965 aa8.52□□□□□ -1.05
CDH1-211ENST00000567320 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.05
CDH1-211ENST00000567320 CTC1Q2NKJ3 1217 aa8.52□□□□□ -1.05
CDH1-211ENST00000567320 EHBP1Q8NDI1 1231 aa8.52□□□□□ -1.05
CDH1-211ENST00000567320 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
CDH1-211ENST00000567320 ALDH1A1P00352 501 aa8.51□□□□□ -1.05
CDH1-211ENST00000567320 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
CDH1-211ENST00000567320 CTHP32929 405 aa8.5□□□□□ -1.05
CDH1-211ENST00000567320 PTPRNQ16849 979 aa8.5□□□□□ -1.05
CDH1-211ENST00000567320 RSBN1LQ6PCB5 846 aaPredicted RBP8.5□□□□□ -1.05
CDH1-211ENST00000567320 CRIPAKQ8N1N5 446 aa8.5□□□□□ -1.05
CDH1-211ENST00000567320 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
CDH1-211ENST00000567320 C11orf95C9JLR9 678 aaPredicted RBP8.49□□□□□ -1.05
CDH1-211ENST00000567320 PDE4DQ08499 809 aa8.49□□□□□ -1.05
CDH1-211ENST00000567320 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
CDH1-211ENST00000567320 TSC1Q92574 1164 aa8.49□□□□□ -1.05
CDH1-211ENST00000567320 UNC93B1Q9H1C4 597 aa8.49□□□□□ -1.05
CDH1-211ENST00000567320 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
CDH1-211ENST00000567320 HPS1Q92902 700 aa8.48□□□□□ -1.05
CDH1-211ENST00000567320 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
CDH1-211ENST00000567320 EVA1BQ9NVM1 165 aa8.48□□□□□ -1.05
CDH1-211ENST00000567320 GMPR2Q9P2T1 348 aaKnown RBP8.48□□□□□ -1.05
CDH1-211ENST00000567320 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
CDH1-211ENST00000567320 NUTM2BA6NNL0 878 aaPredicted RBP8.47□□□□□ -1.05
CDH1-211ENST00000567320 NUTM2EB1AL46 878 aaPredicted RBP8.47□□□□□ -1.05
CDH1-211ENST00000567320 KCNH2Q12809 1159 aa8.47□□□□□ -1.05
CDH1-211ENST00000567320 NUTM2DQ5VT03 806 aaPredicted RBP8.47□□□□□ -1.05
CDH1-211ENST00000567320 NUTM2AQ8IVF1 878 aaPredicted RBP8.47□□□□□ -1.05
CDH1-211ENST00000567320 BAP1Q92560 729 aa8.47□□□□□ -1.05
CDH1-211ENST00000567320 WASF2Q9Y6W5 498 aa8.47□□□□□ -1.05
CDH1-211ENST00000567320 GJA5P36382 358 aa8.46□□□□□ -1.06
CDH1-211ENST00000567320 SMCPP49901 116 aaPredicted RBP8.46□□□□□ -1.06
CDH1-211ENST00000567320 SH3BP2P78314 561 aa8.46□□□□□ -1.06
CDH1-211ENST00000567320 SPTLC1O15269 473 aa8.45□□□□□ -1.06
CDH1-211ENST00000567320 HRCP23327 699 aa8.45□□□□□ -1.06
CDH1-211ENST00000567320 DESI1Q6ICB0 168 aa8.45□□□□□ -1.06
CDH1-211ENST00000567320 CABLES1Q8TDN4 633 aa8.45□□□□□ -1.06
CDH1-211ENST00000567320 CFAP99D6REC4 459 aa8.44□□□□□ -1.06
CDH1-211ENST00000567320 ATP13A2Q9NQ11 1180 aa8.44□□□□□ -1.06
CDH1-211ENST00000567320 ATP1B4Q9UN42 357 aaPredicted RBP8.43□□□□□ -1.06
CDH1-211ENST00000567320 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms