RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 STK31Q9BXU1 1019 aa7.71□□□□□ -1.18
CDH13-209ENST00000567109 IPO8O15397 1037 aaKnown RBP7.7□□□□□ -1.18
CDH13-209ENST00000567109 TRAK1Q9UPV9 953 aa7.7□□□□□ -1.18
CDH13-209ENST00000567109 SF3B2Q13435 895 aaKnown RBP7.7□□□□□ -1.18
CDH13-209ENST00000567109 AMPHP49418 695 aa7.7□□□□□ -1.18
CDH13-209ENST00000567109 WWC2Q6AWC2 1192 aa7.7□□□□□ -1.18
CDH13-209ENST00000567109 TPM3P06753 285 aa7.7□□□□□ -1.18
CDH13-209ENST00000567109 PPP1R1BQ9UD71 204 aaPredicted RBP7.7□□□□□ -1.18
CDH13-209ENST00000567109 SAMD1Q6SPF0 538 aaPredicted RBP7.7□□□□□ -1.18
CDH13-209ENST00000567109 LTV1Q96GA3 475 aaPredicted RBP7.69□□□□□ -1.18
CDH13-209ENST00000567109 PTPRKQ15262 1439 aa7.69□□□□□ -1.18
CDH13-209ENST00000567109 CFAP70Q5T0N1 1121 aa7.69□□□□□ -1.18
CDH13-209ENST00000567109 CSPP1Q1MSJ5 1256 aa7.69□□□□□ -1.18
CDH13-209ENST00000567109 SYAP1Q96A49 352 aaPredicted RBP7.69□□□□□ -1.18
CDH13-209ENST00000567109 IDI1Q13907 227 aa7.68□□□□□ -1.18
CDH13-209ENST00000567109 PAF1Q8N7H5 531 aa7.68□□□□□ -1.18
CDH13-209ENST00000567109 R3HCC1Q9Y3T6 440 aaKnown RBP7.68□□□□□ -1.18
CDH13-209ENST00000567109 FBXO31Q5XUX0 539 aaPredicted RBP7.68□□□□□ -1.18
CDH13-209ENST00000567109 C14orf93Q9H972 538 aaKnown RBP7.68□□□□□ -1.18
CDH13-209ENST00000567109 C1orf141Q5JVX7 400 aa7.68□□□□□ -1.18
CDH13-209ENST00000567109 TBX22Q9Y458 520 aa7.68□□□□□ -1.18
CDH13-209ENST00000567109 ATF3P18847 181 aa7.68□□□□□ -1.18
CDH13-209ENST00000567109 ATAD2Q6PL18 1390 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 USP47Q96K76 1375 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 ODF2Q5BJF6 829 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 SF3A1Q15459 793 aaKnown RBP7.67□□□□□ -1.18
CDH13-209ENST00000567109 SLC4A10Q6U841 1118 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 ZFYVE16Q7Z3T8 1539 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 CGNL1Q0VF96 1302 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 ST20-MTHFSA0A0A6YYL1 179 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 SIRT1Q96EB6 747 aa7.67□□□□□ -1.18
CDH13-209ENST00000567109 SYCP2Q9BX26 1530 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 PSME1Q06323 249 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 GBP4Q96PP9 640 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 PUS7Q96PZ0 661 aaKnown RBP7.66□□□□□ -1.18
CDH13-209ENST00000567109 ZMYM3Q14202 1370 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
CDH13-209ENST00000567109 CEBPAP49715 358 aaPredicted RBP7.66□□□□□ -1.18
CDH13-209ENST00000567109 MINK1Q8N4C8 1332 aaPredicted RBP7.66□□□□□ -1.18
CDH13-209ENST00000567109 GPRASP1Q5JY77 1395 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 SETD1BQ9UPS6 1966 aaKnown RBP7.66□□□□□ -1.18
CDH13-209ENST00000567109 WASHC2AQ641Q2 1341 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 DHX16O60231 1041 aaKnown RBP7.66□□□□□ -1.18
CDH13-209ENST00000567109 B4GALNT3Q6L9W6 998 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 ITPRIPQ8IWB1 547 aa7.66□□□□□ -1.18
CDH13-209ENST00000567109 RBM33Q96EV2 1170 aaKnown RBP7.65□□□□□ -1.18
CDH13-209ENST00000567109 ZBED9Q6R2W3 1325 aa7.65□□□□□ -1.18
CDH13-209ENST00000567109 KIF3AQ9Y496 699 aa7.65□□□□□ -1.18
CDH13-209ENST00000567109 SYNE3Q6ZMZ3 975 aa7.65□□□□□ -1.18
CDH13-209ENST00000567109 H3BQV1 296 aa7.65□□□□□ -1.18
CDH13-209ENST00000567109 TMEM132AQ24JP5 1023 aa7.65□□□□□ -1.18
CDH13-209ENST00000567109 LRRFIP1Q32MZ4 808 aaKnown RBP7.65□□□□□ -1.18
CDH13-209ENST00000567109 IFFO2Q5TF58 517 aa7.65□□□□□ -1.18
CDH13-209ENST00000567109 ZNF692Q9BU19 519 aaPredicted RBP7.65□□□□□ -1.18
CDH13-209ENST00000567109 SUPT6HQ7KZ85 1726 aaKnown RBP7.65□□□□□ -1.18
CDH13-209ENST00000567109 KIF16BQ96L93 1317 aa7.65□□□□□ -1.19
CDH13-209ENST00000567109 SKOR2Q2VWA4 1001 aaPredicted RBP7.65□□□□□ -1.19
CDH13-209ENST00000567109 NUTM2FA1L443 756 aa7.65□□□□□ -1.19
CDH13-209ENST00000567109 YEATS2Q9ULM3 1422 aa7.65□□□□□ -1.19
CDH13-209ENST00000567109 FAM135AQ9P2D6 1515 aa7.64□□□□□ -1.19
CDH13-209ENST00000567109 PCMTD1Q96MG8 357 aaPredicted RBP7.64□□□□□ -1.19
CDH13-209ENST00000567109 TPM1P09493 284 aa7.64□□□□□ -1.19
CDH13-209ENST00000567109 TNNT3P45378 269 aaPredicted RBP7.64□□□□□ -1.19
CDH13-209ENST00000567109 CCDC70Q6NSX1 233 aa7.64□□□□□ -1.19
CDH13-209ENST00000567109 COG3Q96JB2 828 aa7.64□□□□□ -1.19
CDH13-209ENST00000567109 ARHGAP31Q2M1Z3 1444 aa7.64□□□□□ -1.19
CDH13-209ENST00000567109 SETQ01105 290 aaPredicted RBP7.64□□□□□ -1.19
CDH13-209ENST00000567109 UHRF1BP1Q6BDS2 1440 aa7.64□□□□□ -1.19
CDH13-209ENST00000567109 PATL2C9JE40 543 aaKnown RBP7.64□□□□□ -1.19
CDH13-209ENST00000567109 HMMRO75330 724 aa7.63□□□□□ -1.19
CDH13-209ENST00000567109 U2AF1L5P0DN76 240 aaPredicted RBP7.63□□□□□ -1.19
CDH13-209ENST00000567109 U2AF1Q01081 240 aaKnown RBP eCLIP7.63□□□□□ -1.19
CDH13-209ENST00000567109 CT47A1Q5JQC4 288 aaPredicted RBP7.63□□□□□ -1.19
CDH13-209ENST00000567109 PHF14O94880 888 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 RIMS2Q9UQ26 1411 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 NLRP13Q86W25 1043 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 ATP7AQ04656 1500 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 DDX11L8A8MPP1 907 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 APPP05067 770 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.62□□□□□ -1.19
CDH13-209ENST00000567109 PPM1FP49593 454 aaPredicted RBP7.62□□□□□ -1.19
CDH13-209ENST00000567109 RRP12Q5JTH9 1297 aaKnown RBP7.62□□□□□ -1.19
CDH13-209ENST00000567109 FAM184AQ8NB25 1140 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 TTC5Q8N0Z6 440 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 VSIG10Q8N0Z9 540 aa7.62□□□□□ -1.19
CDH13-209ENST00000567109 PTPN23Q9H3S7 1636 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 EPS15P42566 896 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.61□□□□□ -1.19
CDH13-209ENST00000567109 RTN4Q9NQC3 1192 aaKnown RBP7.61□□□□□ -1.19
CDH13-209ENST00000567109 TMEM2Q9UHN6 1383 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 IKQ13123 557 aaPredicted RBP7.61□□□□□ -1.19
CDH13-209ENST00000567109 CCDC47Q96A33 483 aaKnown RBP7.61□□□□□ -1.19
CDH13-209ENST00000567109 TRIM29Q14134 588 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 HSP90AA2PQ14568 343 aaPredicted RBP7.61□□□□□ -1.19
CDH13-209ENST00000567109 IL27Q8NEV9 243 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 ARID3AQ99856 593 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 ARHGEF5Q12774 1597 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 NBPF8Q3BBV2 869 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 ADGRF5Q8IZF2 1346 aa7.61□□□□□ -1.19
CDH13-209ENST00000567109 ZFYVE27Q5T4F4 411 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms