RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	TMEM94	Q12767	1356 aa		13.98	□□□□□ -0.17
TCF4-231	ENST00000566279	PLEKHH1	Q9ULM0	1364 aa		13.98	□□□□□ -0.17
TCF4-231	ENST00000566279	WAPL	Q7Z5K2	1190 aa		13.97	□□□□□ -0.17
TCF4-231	ENST00000566279	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.97	□□□□□ -0.17
TCF4-231	ENST00000566279	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
TCF4-231	ENST00000566279	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.97	□□□□□ -0.17
TCF4-231	ENST00000566279	LRPPRC	P42704	1394 aa	Known RBP	13.96	□□□□□ -0.17
TCF4-231	ENST00000566279	NALCN	Q8IZF0	1738 aa		13.96	□□□□□ -0.17
TCF4-231	ENST00000566279	CERK	Q8TCT0	537 aa		13.95	□□□□□ -0.18
TCF4-231	ENST00000566279	POLR3GL	Q9BT43	218 aa		13.95	□□□□□ -0.18
TCF4-231	ENST00000566279	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.94	□□□□□ -0.18
TCF4-231	ENST00000566279	PTCH1	Q13635	1447 aa		13.94	□□□□□ -0.18
TCF4-231	ENST00000566279	C14orf37	Q86TY3	774 aa		13.93	□□□□□ -0.18
TCF4-231	ENST00000566279	PRAM1	Q96QH2	718 aa		13.93	□□□□□ -0.18
TCF4-231	ENST00000566279	ABCC11	Q96J66	1382 aa		13.93	□□□□□ -0.18
TCF4-231	ENST00000566279	TECPR2	O15040	1411 aa		13.93	□□□□□ -0.18
TCF4-231	ENST00000566279	CCDC184	Q52MB2	194 aa		13.92	□□□□□ -0.18
TCF4-231	ENST00000566279	TESK2	Q96S53	571 aa		13.91	□□□□□ -0.18
TCF4-231	ENST00000566279	DLC1	Q96QB1	1528 aa		13.9	□□□□□ -0.18
TCF4-231	ENST00000566279	POGK	Q9P215	609 aa		13.89	□□□□□ -0.19
TCF4-231	ENST00000566279	QRICH2	Q9H0J4	1663 aa		13.89	□□□□□ -0.19
TCF4-231	ENST00000566279	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.89	□□□□□ -0.19
TCF4-231	ENST00000566279	DISP3	Q9P2K9	1392 aa		13.88	□□□□□ -0.19
TCF4-231	ENST00000566279	NUTM2F	A1L443	756 aa		13.88	□□□□□ -0.19
TCF4-231	ENST00000566279	FAM135B	Q49AJ0	1406 aa		13.88	□□□□□ -0.19
TCF4-231	ENST00000566279	ADGRL3	Q9HAR2	1447 aa		13.88	□□□□□ -0.19
TCF4-231	ENST00000566279	MSH6	P52701	1360 aa		13.87	□□□□□ -0.19
TCF4-231	ENST00000566279	MRS2	Q9HD23	443 aa		13.86	□□□□□ -0.19
TCF4-231	ENST00000566279	UBAP1L	F5GYI3	381 aa		13.85	□□□□□ -0.19
TCF4-231	ENST00000566279	PIP4K2B	P78356	416 aa		13.84	□□□□□ -0.19
TCF4-231	ENST00000566279	C19orf44	Q9H6X5	657 aa		13.84	□□□□□ -0.19
TCF4-231	ENST00000566279	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.84	□□□□□ -0.19
TCF4-231	ENST00000566279	RGPD8	O14715	1765 aa	Predicted RBP	13.83	□□□□□ -0.19
TCF4-231	ENST00000566279	IQSEC2	Q5JU85	1478 aa		13.83	□□□□□ -0.2
TCF4-231	ENST00000566279	TMF1	P82094	1093 aa		13.83	□□□□□ -0.2
TCF4-231	ENST00000566279	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
TCF4-231	ENST00000566279	CDC42BPG	Q6DT37	1551 aa		13.83	□□□□□ -0.2
TCF4-231	ENST00000566279	SIRT1	Q96EB6	747 aa		13.82	□□□□□ -0.2
TCF4-231	ENST00000566279	NCOA3	Q9Y6Q9	1424 aa		13.82	□□□□□ -0.2
TCF4-231	ENST00000566279	FMN2	Q9NZ56	1722 aa		13.82	□□□□□ -0.2
TCF4-231	ENST00000566279	ATF3	P18847	181 aa		13.82	□□□□□ -0.2
TCF4-231	ENST00000566279	ADGRB2	O60241	1585 aa		13.81	□□□□□ -0.2
TCF4-231	ENST00000566279	TULP4	Q9NRJ4	1543 aa		13.81	□□□□□ -0.2
TCF4-231	ENST00000566279	EIF3A	Q14152	1382 aa	Known RBP	13.81	□□□□□ -0.2
TCF4-231	ENST00000566279	KTN1	Q86UP2	1357 aa	Known RBP	13.81	□□□□□ -0.2
TCF4-231	ENST00000566279	USP32	Q8NFA0	1604 aa		13.81	□□□□□ -0.2
TCF4-231	ENST00000566279	MST1R	Q04912	1400 aa		13.81	□□□□□ -0.2
TCF4-231	ENST00000566279	CNGB1	Q14028	1251 aa	Predicted RBP	13.81	□□□□□ -0.2
TCF4-231	ENST00000566279	ROBO1	Q9Y6N7	1651 aa		13.8	□□□□□ -0.2
TCF4-231	ENST00000566279	CADPS2	Q86UW7	1296 aa		13.79	□□□□□ -0.2
TCF4-231	ENST00000566279	FAM9B	Q8IZU0	186 aa		13.79	□□□□□ -0.2
TCF4-231	ENST00000566279	DCC	P43146	1447 aa		13.79	□□□□□ -0.2
TCF4-231	ENST00000566279	PER1	O15534	1290 aa	Predicted RBP	13.79	□□□□□ -0.2
TCF4-231	ENST00000566279	TOM1	O60784	492 aa		13.79	□□□□□ -0.2
TCF4-231	ENST00000566279	SLAIN2	Q9P270	581 aa		13.79	□□□□□ -0.2
TCF4-231	ENST00000566279	ORAI2	Q96SN7	254 aa		13.78	□□□□□ -0.2
TCF4-231	ENST00000566279	WASL	O00401	505 aa	Predicted RBP	13.78	□□□□□ -0.2
TCF4-231	ENST00000566279	RALBP1	Q15311	655 aa		13.78	□□□□□ -0.2
TCF4-231	ENST00000566279	CABP2	Q9NPB3	220 aa		13.78	□□□□□ -0.2
TCF4-231	ENST00000566279	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.78	□□□□□ -0.2
TCF4-231	ENST00000566279	PRR36	Q9H6K5	1346 aa		13.78	□□□□□ -0.2
TCF4-231	ENST00000566279	C1orf167	Q5SNV9	1468 aa		13.78	□□□□□ -0.2
TCF4-231	ENST00000566279	PARD3	Q8TEW0	1356 aa		13.77	□□□□□ -0.21
TCF4-231	ENST00000566279	DDX17	Q92841	729 aa	Known RBP	13.77	□□□□□ -0.21
TCF4-231	ENST00000566279	CDK19	Q9BWU1	502 aa		13.77	□□□□□ -0.21
TCF4-231	ENST00000566279	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.76	□□□□□ -0.21
TCF4-231	ENST00000566279	MYOM1	P52179	1685 aa		13.76	□□□□□ -0.21
TCF4-231	ENST00000566279	PANK3	Q9H999	370 aa		13.76	□□□□□ -0.21
TCF4-231	ENST00000566279	SRPK2	P78362	688 aa	Known RBP	13.75	□□□□□ -0.21
TCF4-231	ENST00000566279	ATP7B	P35670	1465 aa		13.75	□□□□□ -0.21
TCF4-231	ENST00000566279	ESCO1	Q5FWF5	840 aa		13.75	□□□□□ -0.21
TCF4-231	ENST00000566279	BRINP3	Q76B58	766 aa		13.75	□□□□□ -0.21
TCF4-231	ENST00000566279	BRD4	O60885	1362 aa	Predicted RBP	13.74	□□□□□ -0.21
TCF4-231	ENST00000566279	CDCA8	Q53HL2	280 aa		13.73	□□□□□ -0.21
TCF4-231	ENST00000566279	PMFBP1	Q8TBY8	1022 aa		13.73	□□□□□ -0.21
TCF4-231	ENST00000566279	FBXO41	Q8TF61	875 aa		13.73	□□□□□ -0.21
TCF4-231	ENST00000566279	ZBED9	Q6R2W3	1325 aa		13.73	□□□□□ -0.21
TCF4-231	ENST00000566279	TOPAZ1	Q8N9V7	1692 aa		13.73	□□□□□ -0.21
TCF4-231	ENST00000566279	PNISR	Q8TF01	805 aa	Known RBP	13.73	□□□□□ -0.21
TCF4-231	ENST00000566279	XPC	Q01831	940 aa	Predicted RBP	13.72	□□□□□ -0.21
TCF4-231	ENST00000566279	SBNO2	Q9Y2G9	1366 aa		13.72	□□□□□ -0.21
TCF4-231	ENST00000566279	EVC2	Q86UK5	1308 aa		13.72	□□□□□ -0.21
TCF4-231	ENST00000566279	NUDT16	Q96DE0	195 aa	Known RBP	13.72	□□□□□ -0.21
TCF4-231	ENST00000566279	TMC1	Q8TDI8	760 aa		13.71	□□□□□ -0.21
TCF4-231	ENST00000566279	ITSN1	Q15811	1721 aa		13.7	□□□□□ -0.22
TCF4-231	ENST00000566279	PHLPP1	O60346	1717 aa		13.7	□□□□□ -0.22
TCF4-231	ENST00000566279	FOXO3	O43524	673 aa		13.7	□□□□□ -0.22
TCF4-231	ENST00000566279	ILDR1	Q86SU0	546 aa	Predicted RBP	13.7	□□□□□ -0.22
TCF4-231	ENST00000566279	NLRP13	Q86W25	1043 aa		13.7	□□□□□ -0.22
TCF4-231	ENST00000566279	ANKAR	Q7Z5J8	1434 aa		13.69	□□□□□ -0.22
TCF4-231	ENST00000566279	NHSL1	Q5SYE7	1610 aa		13.69	□□□□□ -0.22
TCF4-231	ENST00000566279	SLC24A1	O60721	1099 aa		13.69	□□□□□ -0.22
TCF4-231	ENST00000566279	HSPA1L	P34931	641 aa		13.69	□□□□□ -0.22
TCF4-231	ENST00000566279	PPIP5K1	Q6PFW1	1433 aa		13.69	□□□□□ -0.22
TCF4-231	ENST00000566279	CC2D1B	Q5T0F9	858 aa	Known RBP	13.69	□□□□□ -0.22
TCF4-231	ENST00000566279	PHF8	Q9UPP1	1060 aa		13.68	□□□□□ -0.22
TCF4-231	ENST00000566279	KIF1A	Q12756	1690 aa		13.68	□□□□□ -0.22
TCF4-231	ENST00000566279	CABP1	Q9NZU7	370 aa		13.67	□□□□□ -0.22
TCF4-231	ENST00000566279	FKBP8	Q14318	412 aa		13.67	□□□□□ -0.22
TCF4-231	ENST00000566279	CCDC61	Q9Y6R9	512 aa		13.66	□□□□□ -0.22

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