RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 DZIP1LQ8IYY4 767 aaKnown RBP12.79□□□□□ -0.36
SNX29-205ENST00000566228 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
SNX29-205ENST00000566228 MEX3CQ5U5Q3 659 aaKnown RBP12.78□□□□□ -0.36
SNX29-205ENST00000566228 CENPQQ7L2Z9 268 aaPredicted RBP12.78□□□□□ -0.36
SNX29-205ENST00000566228 TEFQ10587 303 aa12.78□□□□□ -0.36
SNX29-205ENST00000566228 PDCL3Q9H2J4 239 aa12.78□□□□□ -0.36
SNX29-205ENST00000566228 IFIT2P09913 472 aaKnown RBP12.78□□□□□ -0.36
SNX29-205ENST00000566228 CCDC39Q9UFE4 941 aa12.78□□□□□ -0.36
SNX29-205ENST00000566228 POLR3GO15318 223 aaPredicted RBP12.78□□□□□ -0.36
SNX29-205ENST00000566228 HIRIP3Q9BW71 556 aaPredicted RBP12.77□□□□□ -0.36
SNX29-205ENST00000566228 MSH5O43196 834 aa12.77□□□□□ -0.36
SNX29-205ENST00000566228 SMC2O95347 1197 aa12.77□□□□□ -0.36
SNX29-205ENST00000566228 CEP63Q96MT8 703 aa12.77□□□□□ -0.36
SNX29-205ENST00000566228 HMGB3O15347 200 aaKnown RBP12.77□□□□□ -0.37
SNX29-205ENST00000566228 CEP164Q9UPV0 1460 aa12.77□□□□□ -0.37
SNX29-205ENST00000566228 HIP1O00291 1037 aa12.77□□□□□ -0.37
SNX29-205ENST00000566228 MCM3P25205 808 aa12.77□□□□□ -0.37
SNX29-205ENST00000566228 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
SNX29-205ENST00000566228 FAM107BQ9H098 131 aa12.76□□□□□ -0.37
SNX29-205ENST00000566228 JAKMIP3Q5VZ66 844 aa12.76□□□□□ -0.37
SNX29-205ENST00000566228 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
SNX29-205ENST00000566228 KINO60870 393 aaKnown RBP12.76□□□□□ -0.37
SNX29-205ENST00000566228 CCDC181Q5TID7 509 aa12.76□□□□□ -0.37
SNX29-205ENST00000566228 MCM2P49736 904 aa12.75□□□□□ -0.37
SNX29-205ENST00000566228 IKQ13123 557 aaPredicted RBP12.75□□□□□ -0.37
SNX29-205ENST00000566228 FAM43AQ8N2R8 423 aa12.75□□□□□ -0.37
SNX29-205ENST00000566228 EPB41L2O43491 1005 aaKnown RBP12.75□□□□□ -0.37
SNX29-205ENST00000566228 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNX29-205ENST00000566228 ANAPC15P60006 121 aa12.75□□□□□ -0.37
SNX29-205ENST00000566228 G3BP1Q13283 466 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNX29-205ENST00000566228 FAM161AQ3B820 660 aa12.75□□□□□ -0.37
SNX29-205ENST00000566228 GIMAP7Q8NHV1 300 aa12.75□□□□□ -0.37
SNX29-205ENST00000566228 SDF4Q9BRK5 362 aa12.75□□□□□ -0.37
SNX29-205ENST00000566228 ANO2Q9NQ90 1003 aa12.74□□□□□ -0.37
SNX29-205ENST00000566228 HOMER2Q9NSB8 354 aa12.74□□□□□ -0.37
SNX29-205ENST00000566228 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
SNX29-205ENST00000566228 FERMT1Q9BQL6 677 aa12.73□□□□□ -0.37
SNX29-205ENST00000566228 CARMIL2Q6F5E8 1435 aa12.73□□□□□ -0.37
SNX29-205ENST00000566228 KRT18P05783 430 aaKnown RBP12.73□□□□□ -0.37
SNX29-205ENST00000566228 DDX12PQ92771 950 aa12.73□□□□□ -0.37
SNX29-205ENST00000566228 PPP1R12BO60237 982 aaPredicted RBP12.73□□□□□ -0.37
SNX29-205ENST00000566228 INTS3Q68E01 1043 aaKnown RBP12.73□□□□□ -0.37
SNX29-205ENST00000566228 PABPN1LA6NDY0 278 aaKnown RBP12.73□□□□□ -0.37
SNX29-205ENST00000566228 ZWINTO95229 277 aa12.73□□□□□ -0.37
SNX29-205ENST00000566228 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
SNX29-205ENST00000566228 TBC1D2BQ9UPU7 963 aa12.73□□□□□ -0.37
SNX29-205ENST00000566228 BMP2KQ9NSY1 1161 aaPredicted RBP12.72□□□□□ -0.37
SNX29-205ENST00000566228 NOL8Q76FK4 1167 aaKnown RBP12.72□□□□□ -0.37
SNX29-205ENST00000566228 LRRC45Q96CN5 670 aa12.72□□□□□ -0.37
SNX29-205ENST00000566228 MBD3O95983 291 aa12.72□□□□□ -0.37
SNX29-205ENST00000566228 ZNF396Q96N95 335 aaPredicted RBP12.72□□□□□ -0.37
SNX29-205ENST00000566228 GSE1Q14687 1217 aa12.72□□□□□ -0.37
SNX29-205ENST00000566228 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
SNX29-205ENST00000566228 SREK1Q8WXA9 508 aaKnown RBP12.71□□□□□ -0.37
SNX29-205ENST00000566228 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
SNX29-205ENST00000566228 RBM19Q9Y4C8 960 aaKnown RBP12.71□□□□□ -0.37
SNX29-205ENST00000566228 MAP9Q49MG5 647 aa12.71□□□□□ -0.38
SNX29-205ENST00000566228 PDILTQ8N807 584 aa12.71□□□□□ -0.38
SNX29-205ENST00000566228 SETD5Q9C0A6 1442 aa12.71□□□□□ -0.38
SNX29-205ENST00000566228 FAM13BQ9NYF5 915 aa12.71□□□□□ -0.38
SNX29-205ENST00000566228 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 NLRP13Q86W25 1043 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 STK26Q9P289 416 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 GNL3LQ9NVN8 582 aaKnown RBP12.7□□□□□ -0.38
SNX29-205ENST00000566228 CYB5RLQ6IPT4 315 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
SNX29-205ENST00000566228 CBFA2T2O43439 604 aa12.69□□□□□ -0.38
SNX29-205ENST00000566228 FERP16591 822 aa12.69□□□□□ -0.38
SNX29-205ENST00000566228 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
SNX29-205ENST00000566228 BCCIPQ9P287 314 aaKnown RBP eCLIP12.69□□□□□ -0.38
SNX29-205ENST00000566228 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
SNX29-205ENST00000566228 HOOK3Q86VS8 718 aa12.69□□□□□ -0.38
SNX29-205ENST00000566228 LRRCC1Q9C099 1032 aa12.69□□□□□ -0.38
SNX29-205ENST00000566228 SLU7O95391 586 aaKnown RBP12.68□□□□□ -0.38
SNX29-205ENST00000566228 IMMTQ16891 758 aaKnown RBP12.68□□□□□ -0.38
SNX29-205ENST00000566228 GCOM1H8Y6P7 765 aaPredicted RBP12.68□□□□□ -0.38
SNX29-205ENST00000566228 MYZAPP0CAP1 466 aa12.68□□□□□ -0.38
SNX29-205ENST00000566228 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
SNX29-205ENST00000566228 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
SNX29-205ENST00000566228 MAP2K1Q02750 393 aaPredicted RBP12.68□□□□□ -0.38
SNX29-205ENST00000566228 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
SNX29-205ENST00000566228 SSX2IPQ9Y2D8 614 aa12.68□□□□□ -0.38
SNX29-205ENST00000566228 ZKSCAN2Q63HK3 967 aa12.68□□□□□ -0.38
SNX29-205ENST00000566228 CCDC150Q8NCX0 1101 aa12.68□□□□□ -0.38
SNX29-205ENST00000566228 API5Q9BZZ5 524 aaKnown RBP12.68□□□□□ -0.38
SNX29-205ENST00000566228 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
SNX29-205ENST00000566228 TAOK3Q9H2K8 898 aa12.68□□□□□ -0.38
SNX29-205ENST00000566228 FYB1O15117 783 aa12.67□□□□□ -0.38
SNX29-205ENST00000566228 MICALCLQ6ZW33 695 aa12.67□□□□□ -0.38
SNX29-205ENST00000566228 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
SNX29-205ENST00000566228 TMEM87AQ8NBN3 555 aa12.67□□□□□ -0.38
SNX29-205ENST00000566228 GTPBP4Q9BZE4 634 aaKnown RBP12.67□□□□□ -0.38
SNX29-205ENST00000566228 TAX1BP1Q86VP1 789 aa12.67□□□□□ -0.38
SNX29-205ENST00000566228 VPS36Q86VN1 386 aa12.67□□□□□ -0.38
SNX29-205ENST00000566228 C6orf163Q5TEZ5 329 aa12.66□□□□□ -0.38
SNX29-205ENST00000566228 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
SNX29-205ENST00000566228 ANKRD1Q15327 319 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms