RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 RALGAPBQ86X10 1494 aa9.71□□□□□ -0.86
UBE3A-205ENST00000566215 ATF3P18847 181 aa9.7□□□□□ -0.86
UBE3A-205ENST00000566215 LRPPRCP42704 1394 aaKnown RBP9.7□□□□□ -0.86
UBE3A-205ENST00000566215 AFF2P51816 1311 aa9.69□□□□□ -0.86
UBE3A-205ENST00000566215 PPP1R15AO75807 674 aaPredicted RBP9.69□□□□□ -0.86
UBE3A-205ENST00000566215 RRBP1Q9P2E9 1410 aaKnown RBP9.68□□□□□ -0.86
UBE3A-205ENST00000566215 ITSN1Q15811 1721 aa9.68□□□□□ -0.86
UBE3A-205ENST00000566215 COL24A1Q17RW2 1714 aa9.68□□□□□ -0.86
UBE3A-205ENST00000566215 ONECUT3O60422 494 aaPredicted RBP9.68□□□□□ -0.86
UBE3A-205ENST00000566215 KANK4Q5T7N3 995 aaPredicted RBP9.68□□□□□ -0.86
UBE3A-205ENST00000566215 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
UBE3A-205ENST00000566215 TRPC5Q9UL62 973 aaPredicted RBP9.67□□□□□ -0.86
UBE3A-205ENST00000566215 ANKARQ7Z5J8 1434 aa9.66□□□□□ -0.86
UBE3A-205ENST00000566215 SBNO1A3KN83 1393 aa9.66□□□□□ -0.86
UBE3A-205ENST00000566215 PARD3Q8TEW0 1356 aa9.66□□□□□ -0.86
UBE3A-205ENST00000566215 WNK3Q9BYP7 1800 aa9.65□□□□□ -0.86
UBE3A-205ENST00000566215 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.86
UBE3A-205ENST00000566215 SLC26A8Q96RN1 970 aa9.65□□□□□ -0.86
UBE3A-205ENST00000566215 AMOTL2Q9Y2J4 779 aa9.65□□□□□ -0.86
UBE3A-205ENST00000566215 RRP7BPQ9NSQ0 103 aa9.65□□□□□ -0.87
UBE3A-205ENST00000566215 NUP188Q5SRE5 1749 aa9.64□□□□□ -0.87
UBE3A-205ENST00000566215 METP08581 1390 aa9.64□□□□□ -0.87
UBE3A-205ENST00000566215 TOPAZ1Q8N9V7 1692 aa9.64□□□□□ -0.87
UBE3A-205ENST00000566215 QSER1Q2KHR3 1735 aa9.64□□□□□ -0.87
UBE3A-205ENST00000566215 MEX3CQ5U5Q3 659 aaKnown RBP9.63□□□□□ -0.87
UBE3A-205ENST00000566215 PARP4Q9UKK3 1724 aaKnown RBP9.63□□□□□ -0.87
UBE3A-205ENST00000566215 ABCC11Q96J66 1382 aa9.63□□□□□ -0.87
UBE3A-205ENST00000566215 KIAA1210Q9ULL0 1709 aa9.63□□□□□ -0.87
UBE3A-205ENST00000566215 PHRF1Q9P1Y6 1649 aaKnown RBP9.62□□□□□ -0.87
UBE3A-205ENST00000566215 USP54Q70EL1 1684 aa9.61□□□□□ -0.87
UBE3A-205ENST00000566215 ABCC6O95255 1503 aa9.61□□□□□ -0.87
UBE3A-205ENST00000566215 CASZ1Q86V15 1759 aa9.61□□□□□ -0.87
UBE3A-205ENST00000566215 QTRT2Q9H974 415 aaKnown RBP9.61□□□□□ -0.87
UBE3A-205ENST00000566215 ZRANB1Q9UGI0 708 aa9.61□□□□□ -0.87
UBE3A-205ENST00000566215 NPHP3Q7Z494 1330 aa9.6□□□□□ -0.87
UBE3A-205ENST00000566215 PIK3C2GO75747 1445 aa9.6□□□□□ -0.87
UBE3A-205ENST00000566215 SPATA31E1Q6ZUB1 1445 aa9.6□□□□□ -0.87
UBE3A-205ENST00000566215 PEAK1Q9H792 1746 aa9.6□□□□□ -0.87
UBE3A-205ENST00000566215 ANKRD30BQ9BXX2 1392 aa9.59□□□□□ -0.87
UBE3A-205ENST00000566215 TNS3Q68CZ2 1445 aa9.59□□□□□ -0.87
UBE3A-205ENST00000566215 EIF3AQ14152 1382 aaKnown RBP9.58□□□□□ -0.88
UBE3A-205ENST00000566215 LMO7Q8WWI1 1683 aa9.58□□□□□ -0.88
UBE3A-205ENST00000566215 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
UBE3A-205ENST00000566215 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
UBE3A-205ENST00000566215 ATP7BP35670 1465 aa9.58□□□□□ -0.88
UBE3A-205ENST00000566215 ARHGEF10O15013 1369 aa9.57□□□□□ -0.88
UBE3A-205ENST00000566215 BCL9O00512 1426 aa9.57□□□□□ -0.88
UBE3A-205ENST00000566215 NAIPQ13075 1403 aa9.57□□□□□ -0.88
UBE3A-205ENST00000566215 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
UBE3A-205ENST00000566215 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
UBE3A-205ENST00000566215 BRD4O60885 1362 aaPredicted RBP9.56□□□□□ -0.88
UBE3A-205ENST00000566215 VPS72Q15906 364 aa9.56□□□□□ -0.88
UBE3A-205ENST00000566215 RGPD8O14715 1765 aaPredicted RBP9.56□□□□□ -0.88
UBE3A-205ENST00000566215 NUP155O75694 1391 aa9.55□□□□□ -0.88
UBE3A-205ENST00000566215 USP21Q9UK80 565 aa9.55□□□□□ -0.88
UBE3A-205ENST00000566215 GJD4Q96KN9 370 aaPredicted RBP9.55□□□□□ -0.88
UBE3A-205ENST00000566215 TULP4Q9NRJ4 1543 aa9.55□□□□□ -0.88
UBE3A-205ENST00000566215 SPATA31A3Q5VYP0 1347 aa9.54□□□□□ -0.88
UBE3A-205ENST00000566215 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
UBE3A-205ENST00000566215 UNC5CLQ8IV45 518 aa9.53□□□□□ -0.88
UBE3A-205ENST00000566215 SBF2Q86WG5 1849 aa9.53□□□□□ -0.88
UBE3A-205ENST00000566215 TRIM52Q96A61 297 aa9.53□□□□□ -0.88
UBE3A-205ENST00000566215 STAC3Q96MF2 364 aa9.53□□□□□ -0.88
UBE3A-205ENST00000566215 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.52□□□□□ -0.899e-8■■■□□ 14.6
UBE3A-205ENST00000566215 ARHGEF28Q8N1W1 1705 aaKnown RBP9.51□□□□□ -0.89
UBE3A-205ENST00000566215 NRKQ7Z2Y5 1582 aa9.51□□□□□ -0.89
UBE3A-205ENST00000566215 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
UBE3A-205ENST00000566215 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
UBE3A-205ENST00000566215 CAMTA1Q9Y6Y1 1673 aa9.49□□□□□ -0.89
UBE3A-205ENST00000566215 APLP2Q06481 763 aa9.49□□□□□ -0.89
UBE3A-205ENST00000566215 QRICH2Q9H0J4 1663 aa9.49□□□□□ -0.89
UBE3A-205ENST00000566215 C8orf37Q96NL8 207 aa9.49□□□□□ -0.89
UBE3A-205ENST00000566215 AATKQ6ZMQ8 1374 aa9.48□□□□□ -0.89
UBE3A-205ENST00000566215 C14orf37Q86TY3 774 aa9.47□□□□□ -0.89
UBE3A-205ENST00000566215 PAPPAQ13219 1627 aa9.47□□□□□ -0.89
UBE3A-205ENST00000566215 DHX57Q6P158 1386 aaKnown RBP9.47□□□□□ -0.89
UBE3A-205ENST00000566215 AKAP12Q02952 1782 aa9.46□□□□□ -0.89
UBE3A-205ENST00000566215 SLIT3O75094 1523 aa9.46□□□□□ -0.89
UBE3A-205ENST00000566215 PSME1Q06323 249 aa9.46□□□□□ -0.89
UBE3A-205ENST00000566215 LRRC37A3O60309 1634 aa9.46□□□□□ -0.9
UBE3A-205ENST00000566215 COL18A1P39060 1754 aa9.46□□□□□ -0.9
UBE3A-205ENST00000566215 MAP3K5Q99683 1374 aa9.46□□□□□ -0.9
UBE3A-205ENST00000566215 CPDO75976 1380 aa9.45□□□□□ -0.9
UBE3A-205ENST00000566215 BCANQ96GW7 911 aa9.45□□□□□ -0.9
UBE3A-205ENST00000566215 NHSQ6T4R5 1651 aa9.44□□□□□ -0.9
UBE3A-205ENST00000566215 FAM208AQ9UK61 1670 aaKnown RBP9.44□□□□□ -0.9
UBE3A-205ENST00000566215 CHD4Q14839 1912 aa9.43□□□□□ -0.9
UBE3A-205ENST00000566215 NUTM2BA6NNL0 878 aaPredicted RBP9.43□□□□□ -0.9
UBE3A-205ENST00000566215 NUTM2EB1AL46 878 aaPredicted RBP9.43□□□□□ -0.9
UBE3A-205ENST00000566215 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
UBE3A-205ENST00000566215 NUTM2AQ8IVF1 878 aaPredicted RBP9.43□□□□□ -0.9
UBE3A-205ENST00000566215 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
UBE3A-205ENST00000566215 BARGINQ6ZT62 677 aa9.42□□□□□ -0.9
UBE3A-205ENST00000566215 RBM33Q96EV2 1170 aaKnown RBP9.42□□□□□ -0.9
UBE3A-205ENST00000566215 SPATA31A5Q5VU36 1347 aa9.42□□□□□ -0.9
UBE3A-205ENST00000566215 SPATA31A7Q8IWB4 1347 aa9.42□□□□□ -0.9
UBE3A-205ENST00000566215 BAG6P46379 1132 aa9.42□□□□□ -0.9
UBE3A-205ENST00000566215 ORAI2Q96SN7 254 aa9.41□□□□□ -0.9
UBE3A-205ENST00000566215 C14orf93Q9H972 538 aaKnown RBP9.41□□□□□ -0.9
UBE3A-205ENST00000566215 CHIC2Q9UKJ5 165 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms