RNA–Protein interactions for RNA: ENST00000566042.5

CPNE2-206, Transcript of copine 2, humanhuman

TSL 2

Gene CPNE2, Length 3,446 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-206ENST00000566042 RNF123Q5XPI4 1314 aa13.54□□□□□ -0.24
CPNE2-206ENST00000566042 PDE3BQ13370 1112 aa13.54□□□□□ -0.24
CPNE2-206ENST00000566042 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
CPNE2-206ENST00000566042 SBNO2Q9Y2G9 1366 aa13.54□□□□□ -0.24
CPNE2-206ENST00000566042 MTHFSP49914 203 aa13.54□□□□□ -0.24
CPNE2-206ENST00000566042 SETBP1Q9Y6X0 1596 aa13.53□□□□□ -0.24
CPNE2-206ENST00000566042 PREX1Q8TCU6 1659 aa13.53□□□□□ -0.24
CPNE2-206ENST00000566042 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
CPNE2-206ENST00000566042 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.24
CPNE2-206ENST00000566042 C20orf194Q5TEA3 1177 aa13.52□□□□□ -0.24
CPNE2-206ENST00000566042 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
CPNE2-206ENST00000566042 ZMYM4Q5VZL5 1548 aa13.51□□□□□ -0.25
CPNE2-206ENST00000566042 TULP4Q9NRJ4 1543 aa13.51□□□□□ -0.25
CPNE2-206ENST00000566042 FBLN1P23142 703 aa13.51□□□□□ -0.25
CPNE2-206ENST00000566042 CLTCQ00610 1675 aaKnown RBP13.51□□□□□ -0.25
CPNE2-206ENST00000566042 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
CPNE2-206ENST00000566042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.5□□□□□ -0.25
CPNE2-206ENST00000566042 NPC1L1Q9UHC9 1359 aa13.5□□□□□ -0.25
CPNE2-206ENST00000566042 TMEM131LA2VDJ0 1609 aa13.5□□□□□ -0.25
CPNE2-206ENST00000566042 SKAP1Q86WV1 359 aa13.5□□□□□ -0.25
CPNE2-206ENST00000566042 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
CPNE2-206ENST00000566042 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
CPNE2-206ENST00000566042 YTHDC2Q9H6S0 1430 aaKnown RBP13.5□□□□□ -0.25
CPNE2-206ENST00000566042 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
CPNE2-206ENST00000566042 TXNDC2Q86VQ3 553 aa13.49□□□□□ -0.25
CPNE2-206ENST00000566042 ZC3H13Q5T200 1668 aaKnown RBP13.49□□□□□ -0.25
CPNE2-206ENST00000566042 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
CPNE2-206ENST00000566042 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
CPNE2-206ENST00000566042 PPM1GO15355 546 aaPredicted RBP13.49□□□□□ -0.25
CPNE2-206ENST00000566042 CRBNQ96SW2 442 aa13.49□□□□□ -0.25
CPNE2-206ENST00000566042 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
CPNE2-206ENST00000566042 ZMYM3Q14202 1370 aa13.48□□□□□ -0.25
CPNE2-206ENST00000566042 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
CPNE2-206ENST00000566042 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
CPNE2-206ENST00000566042 ARHGEF28Q8N1W1 1705 aaKnown RBP13.47□□□□□ -0.25
CPNE2-206ENST00000566042 U2SURPO15042 1029 aaKnown RBP13.47□□□□□ -0.25
CPNE2-206ENST00000566042 RIMS2Q9UQ26 1411 aa13.47□□□□□ -0.25
CPNE2-206ENST00000566042 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
CPNE2-206ENST00000566042 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
CPNE2-206ENST00000566042 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
CPNE2-206ENST00000566042 MSH5O43196 834 aa13.46□□□□□ -0.25
CPNE2-206ENST00000566042 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.26
CPNE2-206ENST00000566042 PTPRMP28827 1452 aa13.45□□□□□ -0.26
CPNE2-206ENST00000566042 ZNF521Q96K83 1311 aa13.45□□□□□ -0.26
CPNE2-206ENST00000566042 BCAR3O75815 825 aa13.45□□□□□ -0.26
CPNE2-206ENST00000566042 SLFN5Q08AF3 891 aa13.44□□□□□ -0.26
CPNE2-206ENST00000566042 TCP11L2Q8N4U5 519 aa13.44□□□□□ -0.26
CPNE2-206ENST00000566042 KIF13AQ9H1H9 1805 aa13.44□□□□□ -0.26
CPNE2-206ENST00000566042 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
CPNE2-206ENST00000566042 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
CPNE2-206ENST00000566042 CFAP53Q96M91 514 aa13.44□□□□□ -0.26
CPNE2-206ENST00000566042 METP08581 1390 aa13.43□□□□□ -0.26
CPNE2-206ENST00000566042 FYB1O15117 783 aa13.43□□□□□ -0.26
CPNE2-206ENST00000566042 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
CPNE2-206ENST00000566042 WWC1Q8IX03 1113 aa13.42□□□□□ -0.26
CPNE2-206ENST00000566042 POLR3AO14802 1390 aaPredicted RBP13.42□□□□□ -0.26
CPNE2-206ENST00000566042 HDGFL2Q7Z4V5 671 aaPredicted RBP13.42□□□□□ -0.26
CPNE2-206ENST00000566042 SLC26A8Q96RN1 970 aa13.42□□□□□ -0.26
CPNE2-206ENST00000566042 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
CPNE2-206ENST00000566042 PPP6R1Q9UPN7 881 aa13.41□□□□□ -0.26
CPNE2-206ENST00000566042 AGLP35573 1532 aa13.41□□□□□ -0.26
CPNE2-206ENST00000566042 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
CPNE2-206ENST00000566042 ARHGEF40Q8TER5 1519 aa13.4□□□□□ -0.26
CPNE2-206ENST00000566042 INSRP06213 1382 aa13.4□□□□□ -0.26
CPNE2-206ENST00000566042 RUNDC1Q96C34 613 aa13.4□□□□□ -0.26
CPNE2-206ENST00000566042 ATAD2Q6PL18 1390 aa13.4□□□□□ -0.26
CPNE2-206ENST00000566042 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
CPNE2-206ENST00000566042 TNRQ92752 1358 aa13.39□□□□□ -0.27
CPNE2-206ENST00000566042 SPATA31D1Q6ZQQ2 1576 aa13.38□□□□□ -0.27
CPNE2-206ENST00000566042 ABCC11Q96J66 1382 aa13.38□□□□□ -0.27
CPNE2-206ENST00000566042 E9PSI1 815 aa13.38□□□□□ -0.27
CPNE2-206ENST00000566042 CANXP27824 592 aaKnown RBP13.38□□□□□ -0.27
CPNE2-206ENST00000566042 LTKP29376 864 aa13.38□□□□□ -0.27
CPNE2-206ENST00000566042 SOX12O15370 315 aa13.37□□□□□ -0.27
CPNE2-206ENST00000566042 NME9Q86XW9 330 aa13.37□□□□□ -0.27
CPNE2-206ENST00000566042 DEKP35659 375 aaKnown RBP13.36□□□□□ -0.27
CPNE2-206ENST00000566042 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
CPNE2-206ENST00000566042 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPNE2-206ENST00000566042 PUS7Q96PZ0 661 aaKnown RBP13.36□□□□□ -0.27
CPNE2-206ENST00000566042 REREQ9P2R6 1566 aa13.36□□□□□ -0.27
CPNE2-206ENST00000566042 WASLO00401 505 aaPredicted RBP13.35□□□□□ -0.27
CPNE2-206ENST00000566042 NPM2Q86SE8 214 aaKnown RBP13.35□□□□□ -0.27
CPNE2-206ENST00000566042 TSR2Q969E8 191 aaKnown RBP13.35□□□□□ -0.27
CPNE2-206ENST00000566042 EMILIN1Q9Y6C2 1016 aa13.35□□□□□ -0.27
CPNE2-206ENST00000566042 HMOX1P09601 288 aa13.34□□□□□ -0.27
CPNE2-206ENST00000566042 TRMT2AQ8IZ69 625 aaKnown RBP13.34□□□□□ -0.27
CPNE2-206ENST00000566042 PANK1Q8TE04 598 aa13.34□□□□□ -0.27
CPNE2-206ENST00000566042 NUDT16Q96DE0 195 aaKnown RBP13.34□□□□□ -0.27
CPNE2-206ENST00000566042 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
CPNE2-206ENST00000566042 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
CPNE2-206ENST00000566042 CLUAP1Q96AJ1 413 aa13.34□□□□□ -0.27
CPNE2-206ENST00000566042 RRS1Q15050 365 aaKnown RBP13.33□□□□□ -0.27
CPNE2-206ENST00000566042 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.33□□□□□ -0.28
CPNE2-206ENST00000566042 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
CPNE2-206ENST00000566042 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.28
CPNE2-206ENST00000566042 NSD2O96028 1365 aa13.32□□□□□ -0.28
CPNE2-206ENST00000566042 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
CPNE2-206ENST00000566042 DIAPH1O60610 1272 aaKnown RBP13.32□□□□□ -0.28
CPNE2-206ENST00000566042 COG6Q9Y2V7 657 aa13.32□□□□□ -0.28
CPNE2-206ENST00000566042 PPIP5K1Q6PFW1 1433 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms