RNA–Protein interactions for RNA: ENST00000565891.1

SPG7-212, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-212ENST00000565891 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
SPG7-212ENST00000565891 ESCO1Q5FWF5 840 aa22.02■■□□□ 1.12
SPG7-212ENST00000565891 TECPR2O15040 1411 aa22■■□□□ 1.11
SPG7-212ENST00000565891 C8orf37Q96NL8 207 aa22■■□□□ 1.11
SPG7-212ENST00000565891 PIK3C2GO75747 1445 aa21.99■■□□□ 1.11
SPG7-212ENST00000565891 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
SPG7-212ENST00000565891 ADAMTS2O95450 1211 aa21.98■■□□□ 1.11
SPG7-212ENST00000565891 C14orf93Q9H972 538 aaKnown RBP21.98■■□□□ 1.11
SPG7-212ENST00000565891 SIRT1Q96EB6 747 aa21.97■■□□□ 1.11
SPG7-212ENST00000565891 NGLY1Q96IV0 654 aa21.97■■□□□ 1.11
SPG7-212ENST00000565891 NPHP3Q7Z494 1330 aa21.97■■□□□ 1.11
SPG7-212ENST00000565891 QTRT2Q9H974 415 aaKnown RBP21.96■■□□□ 1.11
SPG7-212ENST00000565891 YTHDC2Q9H6S0 1430 aaKnown RBP21.96■■□□□ 1.11
SPG7-212ENST00000565891 CDC42BPGQ6DT37 1551 aa21.95■■□□□ 1.11
SPG7-212ENST00000565891 LAMC1P11047 1609 aa21.95■■□□□ 1.1
SPG7-212ENST00000565891 IFT172Q9UG01 1749 aa21.95■■□□□ 1.1
SPG7-212ENST00000565891 NUTM2FA1L443 756 aa21.95■■□□□ 1.1
SPG7-212ENST00000565891 FOXO3O43524 673 aa21.94■■□□□ 1.1
SPG7-212ENST00000565891 CFAP70Q5T0N1 1121 aa21.94■■□□□ 1.1
SPG7-212ENST00000565891 PLEKHH1Q9ULM0 1364 aa21.94■■□□□ 1.1
SPG7-212ENST00000565891 DHX57Q6P158 1386 aaKnown RBP21.93■■□□□ 1.1
SPG7-212ENST00000565891 RBM6P78332 1123 aaKnown RBP21.92■■□□□ 1.1
SPG7-212ENST00000565891 CDK12Q9NYV4 1490 aaPredicted RBP21.9■■□□□ 1.1
SPG7-212ENST00000565891 XPCQ01831 940 aaPredicted RBP21.9■■□□□ 1.1
SPG7-212ENST00000565891 UPF1Q92900 1129 aaKnown RBP eCLIP21.9■■□□□ 1.1
SPG7-212ENST00000565891 MYOM2P54296 1465 aa21.9■■□□□ 1.1
SPG7-212ENST00000565891 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
SPG7-212ENST00000565891 HRCP23327 699 aa21.89■■□□□ 1.09
SPG7-212ENST00000565891 USP21Q9UK80 565 aa21.88■■□□□ 1.09
SPG7-212ENST00000565891 KNDC1Q76NI1 1749 aa21.87■■□□□ 1.09
SPG7-212ENST00000565891 PXDNQ92626 1479 aa21.86■■□□□ 1.09
SPG7-212ENST00000565891 FNBP4Q8N3X1 1017 aaPredicted RBP21.86■■□□□ 1.09
SPG7-212ENST00000565891 PRAM1Q96QH2 718 aa21.86■■□□□ 1.09
SPG7-212ENST00000565891 POGKQ9P215 609 aa21.85■■□□□ 1.09
SPG7-212ENST00000565891 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
SPG7-212ENST00000565891 TRPC5Q9UL62 973 aaPredicted RBP21.84■■□□□ 1.09
SPG7-212ENST00000565891 KDM2AQ9Y2K7 1162 aa21.84■■□□□ 1.09
SPG7-212ENST00000565891 KRT28Q7Z3Y7 464 aa21.83■■□□□ 1.09
SPG7-212ENST00000565891 DCAF11Q8TEB1 546 aa21.83■■□□□ 1.09
SPG7-212ENST00000565891 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
SPG7-212ENST00000565891 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
SPG7-212ENST00000565891 COL22A1Q8NFW1 1626 aaPredicted RBP21.81■■□□□ 1.08
SPG7-212ENST00000565891 SPATA31A3Q5VYP0 1347 aa21.8■■□□□ 1.08
SPG7-212ENST00000565891 PSME1Q06323 249 aa21.8■■□□□ 1.08
SPG7-212ENST00000565891 FMN2Q9NZ56 1722 aa21.8■■□□□ 1.08
SPG7-212ENST00000565891 RGS12O14924 1447 aa21.8■■□□□ 1.08
SPG7-212ENST00000565891 TRAK1Q9UPV9 953 aa21.79■■□□□ 1.08
SPG7-212ENST00000565891 DLC1Q96QB1 1528 aa21.76■■□□□ 1.07
SPG7-212ENST00000565891 KIF1AQ12756 1690 aa21.75■■□□□ 1.07
SPG7-212ENST00000565891 ATRNO75882 1429 aa21.75■■□□□ 1.07
SPG7-212ENST00000565891 HAP1P54257 671 aaPredicted RBP21.73■■□□□ 1.07
SPG7-212ENST00000565891 ADGRB1O14514 1584 aa21.73■■□□□ 1.07
SPG7-212ENST00000565891 BCL9LQ86UU0 1499 aa21.72■■□□□ 1.07
SPG7-212ENST00000565891 PMFBP1Q8TBY8 1022 aa21.72■■□□□ 1.07
SPG7-212ENST00000565891 HIRIP3Q9BW71 556 aaPredicted RBP21.72■■□□□ 1.07
SPG7-212ENST00000565891 ANKARQ7Z5J8 1434 aa21.72■■□□□ 1.07
SPG7-212ENST00000565891 LMOD2Q6P5Q4 547 aa21.71■■□□□ 1.07
SPG7-212ENST00000565891 GJD4Q96KN9 370 aaPredicted RBP21.71■■□□□ 1.07
SPG7-212ENST00000565891 MINK1Q8N4C8 1332 aaPredicted RBP21.71■■□□□ 1.07
SPG7-212ENST00000565891 SBNO1A3KN83 1393 aa21.71■■□□□ 1.07
SPG7-212ENST00000565891 UNC5CLQ8IV45 518 aa21.7■■□□□ 1.06
SPG7-212ENST00000565891 ATAD2Q6PL18 1390 aa21.7■■□□□ 1.06
SPG7-212ENST00000565891 TNS3Q68CZ2 1445 aa21.7■■□□□ 1.06
SPG7-212ENST00000565891 CABLES1Q8TDN4 633 aa21.69■■□□□ 1.06
SPG7-212ENST00000565891 EIF3AQ14152 1382 aaKnown RBP21.69■■□□□ 1.06
SPG7-212ENST00000565891 WASLO00401 505 aaPredicted RBP21.68■■□□□ 1.06
SPG7-212ENST00000565891 PLEKHG5O94827 1062 aa21.68■■□□□ 1.06
SPG7-212ENST00000565891 RGPD8O14715 1765 aaPredicted RBP21.68■■□□□ 1.06
SPG7-212ENST00000565891 ARHGEF10O15013 1369 aa21.67■■□□□ 1.06
SPG7-212ENST00000565891 GPRASP1Q5JY77 1395 aa21.65■■□□□ 1.06
SPG7-212ENST00000565891 MARF1Q9Y4F3 1742 aaKnown RBP21.65■■□□□ 1.06
SPG7-212ENST00000565891 ADGRB2O60241 1585 aa21.65■■□□□ 1.06
SPG7-212ENST00000565891 SLIT2O94813 1529 aa21.65■■□□□ 1.06
SPG7-212ENST00000565891 PRR36Q9H6K5 1346 aa21.63■■□□□ 1.05
SPG7-212ENST00000565891 NGDNQ8NEJ9 315 aaKnown RBP21.62■■□□□ 1.05
SPG7-212ENST00000565891 USP32Q8NFA0 1604 aa21.62■■□□□ 1.05
SPG7-212ENST00000565891 VPS72Q15906 364 aa21.6■■□□□ 1.05
SPG7-212ENST00000565891 TULP4Q9NRJ4 1543 aa21.6■■□□□ 1.05
SPG7-212ENST00000565891 RALGAPBQ86X10 1494 aa21.59■■□□□ 1.05
SPG7-212ENST00000565891 FAM83GA6ND36 823 aa21.59■■□□□ 1.05
SPG7-212ENST00000565891 CCDC125Q86Z20 511 aa21.59■■□□□ 1.05
SPG7-212ENST00000565891 NUDT16Q96DE0 195 aaKnown RBP21.59■■□□□ 1.05
SPG7-212ENST00000565891 CCDC9Q9Y3X0 531 aaKnown RBP21.58■■□□□ 1.05
SPG7-212ENST00000565891 PAK3O75914 559 aaPredicted RBP21.57■■□□□ 1.04
SPG7-212ENST00000565891 CDK19Q9BWU1 502 aa21.57■■□□□ 1.04
SPG7-212ENST00000565891 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.57■■□□□ 1.04
SPG7-212ENST00000565891 NBPF1Q3BBV0 1214 aa21.54■■□□□ 1.04
SPG7-212ENST00000565891 SEPT12Q8IYM1 358 aa21.54■■□□□ 1.04
SPG7-212ENST00000565891 ONECUT3O60422 494 aaPredicted RBP21.53■■□□□ 1.04
SPG7-212ENST00000565891 GLI3P10071 1580 aa21.53■■□□□ 1.04
SPG7-212ENST00000565891 BTG4Q9NY30 223 aa21.52■■□□□ 1.04
SPG7-212ENST00000565891 CCDC61Q9Y6R9 512 aa21.52■■□□□ 1.04
SPG7-212ENST00000565891 ARHGEF28Q8N1W1 1705 aaKnown RBP21.51■■□□□ 1.03
SPG7-212ENST00000565891 TRPM3Q9HCF6 1732 aaPredicted RBP21.5■■□□□ 1.03
SPG7-212ENST00000565891 ATP7BP35670 1465 aa21.5■■□□□ 1.03
SPG7-212ENST00000565891 NWD2Q9ULI1 1742 aa21.49■■□□□ 1.03
SPG7-212ENST00000565891 NBPF8Q3BBV2 869 aa21.48■■□□□ 1.03
SPG7-212ENST00000565891 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
SPG7-212ENST00000565891 KIAA1210Q9ULL0 1709 aa21.48■■□□□ 1.03
SPG7-212ENST00000565891 ALS2Q96Q42 1657 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms