RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 JCADQ9P266 1359 aa17.65■□□□□ 0.42
NR4A1-221ENST00000565848 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
NR4A1-221ENST00000565848 C14orf37Q86TY3 774 aa17.64■□□□□ 0.41
NR4A1-221ENST00000565848 MSH6P52701 1360 aa17.64■□□□□ 0.41
NR4A1-221ENST00000565848 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
NR4A1-221ENST00000565848 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
NR4A1-221ENST00000565848 CARD11Q9BXL7 1154 aa17.62■□□□□ 0.41
NR4A1-221ENST00000565848 PTCH1Q13635 1447 aa17.62■□□□□ 0.41
NR4A1-221ENST00000565848 NUTM2BA6NNL0 878 aaPredicted RBP17.6■□□□□ 0.41
NR4A1-221ENST00000565848 NUTM2EB1AL46 878 aaPredicted RBP17.6■□□□□ 0.41
NR4A1-221ENST00000565848 RXRBP28702 533 aa17.6■□□□□ 0.41
NR4A1-221ENST00000565848 NUTM2AQ8IVF1 878 aaPredicted RBP17.6■□□□□ 0.41
NR4A1-221ENST00000565848 SIRT1Q96EB6 747 aa17.6■□□□□ 0.41
NR4A1-221ENST00000565848 USP47Q96K76 1375 aa17.6■□□□□ 0.41
NR4A1-221ENST00000565848 ROBO1Q9Y6N7 1651 aa17.6■□□□□ 0.41
NR4A1-221ENST00000565848 NKTRP30414 1462 aaKnown RBP17.57■□□□□ 0.4
NR4A1-221ENST00000565848 SBNO2Q9Y2G9 1366 aa17.57■□□□□ 0.4
NR4A1-221ENST00000565848 XIRP1Q702N8 1843 aaKnown RBP17.57■□□□□ 0.4
NR4A1-221ENST00000565848 QRICH2Q9H0J4 1663 aa17.57■□□□□ 0.4
NR4A1-221ENST00000565848 ROBO2Q9HCK4 1378 aa17.56■□□□□ 0.4
NR4A1-221ENST00000565848 SPATA31A6Q5VVP1 1343 aa17.55■□□□□ 0.4
NR4A1-221ENST00000565848 AMOTL2Q9Y2J4 779 aa17.55■□□□□ 0.4
NR4A1-221ENST00000565848 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
NR4A1-221ENST00000565848 ADGRB2O60241 1585 aa17.54■□□□□ 0.4
NR4A1-221ENST00000565848 HSPA5P11021 654 aaKnown RBP17.54■□□□□ 0.4
NR4A1-221ENST00000565848 EIF4G2P78344 907 aaKnown RBP eCLIP17.54■□□□□ 0.4
NR4A1-221ENST00000565848 TESK2Q96S53 571 aa17.54■□□□□ 0.4
NR4A1-221ENST00000565848 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.54■□□□□ 0.4
NR4A1-221ENST00000565848 ATF3P18847 181 aa17.53■□□□□ 0.4
NR4A1-221ENST00000565848 TRAK1Q9UPV9 953 aa17.53■□□□□ 0.4
NR4A1-221ENST00000565848 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
NR4A1-221ENST00000565848 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
NR4A1-221ENST00000565848 LRP6O75581 1613 aa17.5■□□□□ 0.39
NR4A1-221ENST00000565848 PHLPP1O60346 1717 aa17.5■□□□□ 0.39
NR4A1-221ENST00000565848 STK26Q9P289 416 aa17.5■□□□□ 0.39
NR4A1-221ENST00000565848 NALCNQ8IZF0 1738 aa17.5■□□□□ 0.39
NR4A1-221ENST00000565848 CENPJQ9HC77 1338 aaPredicted RBP17.49■□□□□ 0.39
NR4A1-221ENST00000565848 NCOA3Q9Y6Q9 1424 aa17.49■□□□□ 0.39
NR4A1-221ENST00000565848 TULP4Q9NRJ4 1543 aa17.49■□□□□ 0.39
NR4A1-221ENST00000565848 CADPS2Q86UW7 1296 aa17.48■□□□□ 0.39
NR4A1-221ENST00000565848 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
NR4A1-221ENST00000565848 AFF2P51816 1311 aa17.47■□□□□ 0.39
NR4A1-221ENST00000565848 C19orf44Q9H6X5 657 aa17.47■□□□□ 0.39
NR4A1-221ENST00000565848 WAPLQ7Z5K2 1190 aa17.46■□□□□ 0.39
NR4A1-221ENST00000565848 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
NR4A1-221ENST00000565848 C8orf37Q96NL8 207 aa17.45■□□□□ 0.38
NR4A1-221ENST00000565848 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
NR4A1-221ENST00000565848 ADGRL3Q9HAR2 1447 aa17.44■□□□□ 0.38
NR4A1-221ENST00000565848 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-221ENST00000565848 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
NR4A1-221ENST00000565848 BRINP3Q76B58 766 aa17.42■□□□□ 0.38
NR4A1-221ENST00000565848 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
NR4A1-221ENST00000565848 FMN2Q9NZ56 1722 aa17.41■□□□□ 0.38
NR4A1-221ENST00000565848 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
NR4A1-221ENST00000565848 POGKQ9P215 609 aa17.41■□□□□ 0.38
NR4A1-221ENST00000565848 COL16A1Q07092 1604 aaPredicted RBP17.4■□□□□ 0.38
NR4A1-221ENST00000565848 DCCP43146 1447 aa17.4■□□□□ 0.38
NR4A1-221ENST00000565848 MYOM1P52179 1685 aa17.4■□□□□ 0.38
NR4A1-221ENST00000565848 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
NR4A1-221ENST00000565848 USP32Q8NFA0 1604 aa17.39■□□□□ 0.38
NR4A1-221ENST00000565848 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
NR4A1-221ENST00000565848 ADAMTS2O95450 1211 aa17.38■□□□□ 0.37
NR4A1-221ENST00000565848 NGLY1Q96IV0 654 aa17.38■□□□□ 0.37
NR4A1-221ENST00000565848 ZNF316A6NFI3 1004 aaPredicted RBP17.37■□□□□ 0.37
NR4A1-221ENST00000565848 TMF1P82094 1093 aa17.37■□□□□ 0.37
NR4A1-221ENST00000565848 SAFB2Q14151 953 aaKnown RBP eCLIP17.37■□□□□ 0.37
NR4A1-221ENST00000565848 DDX17Q92841 729 aaKnown RBP17.37■□□□□ 0.37
NR4A1-221ENST00000565848 LRRC59Q96AG4 307 aaKnown RBP17.37■□□□□ 0.37
NR4A1-221ENST00000565848 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
NR4A1-221ENST00000565848 WASHC2AQ641Q2 1341 aa17.37■□□□□ 0.37
NR4A1-221ENST00000565848 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
NR4A1-221ENST00000565848 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
NR4A1-221ENST00000565848 ATP7BP35670 1465 aa17.37■□□□□ 0.37
NR4A1-221ENST00000565848 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
NR4A1-221ENST00000565848 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
NR4A1-221ENST00000565848 EVC2Q86UK5 1308 aa17.36■□□□□ 0.37
NR4A1-221ENST00000565848 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
NR4A1-221ENST00000565848 ANKARQ7Z5J8 1434 aa17.34■□□□□ 0.37
NR4A1-221ENST00000565848 CDK12Q9NYV4 1490 aaPredicted RBP17.33■□□□□ 0.37
NR4A1-221ENST00000565848 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.36
NR4A1-221ENST00000565848 RGS12O14924 1447 aa17.32■□□□□ 0.36
NR4A1-221ENST00000565848 CDK19Q9BWU1 502 aa17.32■□□□□ 0.36
NR4A1-221ENST00000565848 ITSN1Q15811 1721 aa17.32■□□□□ 0.36
NR4A1-221ENST00000565848 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
NR4A1-221ENST00000565848 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
NR4A1-221ENST00000565848 MST1RQ04912 1400 aa17.3■□□□□ 0.36
NR4A1-221ENST00000565848 ATAD2Q6PL18 1390 aa17.3■□□□□ 0.36
NR4A1-221ENST00000565848 AHDC1Q5TGY3 1603 aaPredicted RBP17.3■□□□□ 0.36
NR4A1-221ENST00000565848 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
NR4A1-221ENST00000565848 USP21Q9UK80 565 aa17.29■□□□□ 0.36
NR4A1-221ENST00000565848 CD163L1Q9NR16 1453 aa17.29■□□□□ 0.36
NR4A1-221ENST00000565848 NINLQ9Y2I6 1382 aa17.28■□□□□ 0.36
NR4A1-221ENST00000565848 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
NR4A1-221ENST00000565848 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
NR4A1-221ENST00000565848 AKAP12Q02952 1782 aa17.26■□□□□ 0.35
NR4A1-221ENST00000565848 SHPRHQ149N8 1683 aa17.26■□□□□ 0.35
NR4A1-221ENST00000565848 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
NR4A1-221ENST00000565848 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
NR4A1-221ENST00000565848 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
NR4A1-221ENST00000565848 KIF1AQ12756 1690 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms