RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 STK26Q9P289 416 aa21.6■■□□□ 1.05
KNOP1-203ENST00000565844 NALCNQ8IZF0 1738 aa21.58■■□□□ 1.05
KNOP1-203ENST00000565844 ATF3P18847 181 aa21.58■■□□□ 1.04
KNOP1-203ENST00000565844 USP47Q96K76 1375 aa21.57■■□□□ 1.04
KNOP1-203ENST00000565844 COL16A1Q07092 1604 aaPredicted RBP21.57■■□□□ 1.04
KNOP1-203ENST00000565844 NCOA3Q9Y6Q9 1424 aa21.57■■□□□ 1.04
KNOP1-203ENST00000565844 C19orf44Q9H6X5 657 aa21.57■■□□□ 1.04
KNOP1-203ENST00000565844 TRAK1Q9UPV9 953 aa21.57■■□□□ 1.04
KNOP1-203ENST00000565844 DLC1Q96QB1 1528 aa21.57■■□□□ 1.04
KNOP1-203ENST00000565844 TECPR2O15040 1411 aa21.56■■□□□ 1.04
KNOP1-203ENST00000565844 ABCC11Q96J66 1382 aa21.56■■□□□ 1.04
KNOP1-203ENST00000565844 CADPS2Q86UW7 1296 aa21.55■■□□□ 1.04
KNOP1-203ENST00000565844 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
KNOP1-203ENST00000565844 EIF3AQ14152 1382 aaKnown RBP21.55■■□□□ 1.04
KNOP1-203ENST00000565844 RGS17Q9UGC6 210 aaPredicted RBP21.53■■□□□ 1.04
KNOP1-203ENST00000565844 PTCH1Q13635 1447 aa21.53■■□□□ 1.04
KNOP1-203ENST00000565844 ROBO2Q9HCK4 1378 aa21.51■■□□□ 1.03
KNOP1-203ENST00000565844 EIF4G2P78344 907 aaKnown RBP eCLIP21.51■■□□□ 1.03
KNOP1-203ENST00000565844 AHDC1Q5TGY3 1603 aaPredicted RBP21.5■■□□□ 1.03
KNOP1-203ENST00000565844 BRINP3Q76B58 766 aa21.48■■□□□ 1.03
KNOP1-203ENST00000565844 PRAM1Q96QH2 718 aa21.48■■□□□ 1.03
KNOP1-203ENST00000565844 JCADQ9P266 1359 aa21.48■■□□□ 1.03
KNOP1-203ENST00000565844 HSPA5P11021 654 aaKnown RBP21.48■■□□□ 1.03
KNOP1-203ENST00000565844 POGKQ9P215 609 aa21.48■■□□□ 1.03
KNOP1-203ENST00000565844 MST1RQ04912 1400 aa21.47■■□□□ 1.03
KNOP1-203ENST00000565844 ADGRL3Q9HAR2 1447 aa21.47■■□□□ 1.03
KNOP1-203ENST00000565844 PLEKHH1Q9ULM0 1364 aa21.47■■□□□ 1.03
KNOP1-203ENST00000565844 CENPJQ9HC77 1338 aaPredicted RBP21.47■■□□□ 1.03
KNOP1-203ENST00000565844 WAPLQ7Z5K2 1190 aa21.47■■□□□ 1.03
KNOP1-203ENST00000565844 DCCP43146 1447 aa21.46■■□□□ 1.03
KNOP1-203ENST00000565844 SHPRHQ149N8 1683 aa21.46■■□□□ 1.03
KNOP1-203ENST00000565844 ST20-MTHFSA0A0A6YYL1 179 aa21.46■■□□□ 1.03
KNOP1-203ENST00000565844 SAFB2Q14151 953 aaKnown RBP eCLIP21.46■■□□□ 1.03
KNOP1-203ENST00000565844 SIRT1Q96EB6 747 aa21.46■■□□□ 1.03
KNOP1-203ENST00000565844 NHSL1Q5SYE7 1610 aa21.46■■□□□ 1.03
KNOP1-203ENST00000565844 DDX17Q92841 729 aaKnown RBP21.45■■□□□ 1.02
KNOP1-203ENST00000565844 LRP6O75581 1613 aa21.44■■□□□ 1.02
KNOP1-203ENST00000565844 HIRIP3Q9BW71 556 aaPredicted RBP21.44■■□□□ 1.02
KNOP1-203ENST00000565844 POTEAQ6S8J7 498 aa21.42■■□□□ 1.02
KNOP1-203ENST00000565844 SBNO2Q9Y2G9 1366 aa21.4■■□□□ 1.02
KNOP1-203ENST00000565844 ADGRB2O60241 1585 aa21.4■■□□□ 1.02
KNOP1-203ENST00000565844 MINK1Q8N4C8 1332 aaPredicted RBP21.4■■□□□ 1.02
KNOP1-203ENST00000565844 TESK2Q96S53 571 aa21.38■■□□□ 1.01
KNOP1-203ENST00000565844 NUTM2BA6NNL0 878 aaPredicted RBP21.37■■□□□ 1.01
KNOP1-203ENST00000565844 NUTM2EB1AL46 878 aaPredicted RBP21.37■■□□□ 1.01
KNOP1-203ENST00000565844 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
KNOP1-203ENST00000565844 NUTM2AQ8IVF1 878 aaPredicted RBP21.37■■□□□ 1.01
KNOP1-203ENST00000565844 TULP4Q9NRJ4 1543 aa21.37■■□□□ 1.01
KNOP1-203ENST00000565844 C1orf167Q5SNV9 1468 aa21.36■■□□□ 1.01
KNOP1-203ENST00000565844 CDC42BPGQ6DT37 1551 aa21.36■■□□□ 1.01
KNOP1-203ENST00000565844 SPATA31A6Q5VVP1 1343 aa21.34■■□□□ 1.01
KNOP1-203ENST00000565844 ORAI2Q96SN7 254 aa21.34■■□□□ 1.01
KNOP1-203ENST00000565844 TMF1P82094 1093 aa21.33■■□□□ 1
KNOP1-203ENST00000565844 FMN2Q9NZ56 1722 aa21.32■■□□□ 1
KNOP1-203ENST00000565844 SLC24A1O60721 1099 aa21.32■■□□□ 1
KNOP1-203ENST00000565844 EVC2Q86UK5 1308 aa21.32■■□□□ 1
KNOP1-203ENST00000565844 NUTM2FA1L443 756 aa21.31■■□□□ 1
KNOP1-203ENST00000565844 RGPD8O14715 1765 aaPredicted RBP21.29■■□□□ 1
KNOP1-203ENST00000565844 WASLO00401 505 aaPredicted RBP21.28■■□□□ 1
KNOP1-203ENST00000565844 SRPK2P78362 688 aaKnown RBP21.27■■□□□ 1
KNOP1-203ENST00000565844 CDK19Q9BWU1 502 aa21.27■■□□□ 1
KNOP1-203ENST00000565844 PNPLA6Q8IY17 1366 aa21.26■□□□□ 0.99
KNOP1-203ENST00000565844 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
KNOP1-203ENST00000565844 USP32Q8NFA0 1604 aa21.26■□□□□ 0.99
KNOP1-203ENST00000565844 ITSN1Q15811 1721 aa21.25■□□□□ 0.99
KNOP1-203ENST00000565844 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
KNOP1-203ENST00000565844 C11orf95C9JLR9 678 aaPredicted RBP21.25■□□□□ 0.99
KNOP1-203ENST00000565844 CDCA8Q53HL2 280 aa21.25■□□□□ 0.99
KNOP1-203ENST00000565844 ESCO1Q5FWF5 840 aa21.24■□□□□ 0.99
KNOP1-203ENST00000565844 CABP2Q9NPB3 220 aa21.24■□□□□ 0.99
KNOP1-203ENST00000565844 MYOM1P52179 1685 aa21.24■□□□□ 0.99
KNOP1-203ENST00000565844 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
KNOP1-203ENST00000565844 KIF7Q2M1P5 1343 aa21.24■□□□□ 0.99
KNOP1-203ENST00000565844 XPCQ01831 940 aaPredicted RBP21.23■□□□□ 0.99
KNOP1-203ENST00000565844 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
KNOP1-203ENST00000565844 CCDC7Q96M83 1385 aa21.23■□□□□ 0.99
KNOP1-203ENST00000565844 ATP7BP35670 1465 aa21.22■□□□□ 0.99
KNOP1-203ENST00000565844 WASHC2AQ641Q2 1341 aa21.22■□□□□ 0.99
KNOP1-203ENST00000565844 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
KNOP1-203ENST00000565844 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
KNOP1-203ENST00000565844 AFF2P51816 1311 aa21.21■□□□□ 0.99
KNOP1-203ENST00000565844 ADAMTS2O95450 1211 aa21.21■□□□□ 0.99
KNOP1-203ENST00000565844 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
KNOP1-203ENST00000565844 SOS2Q07890 1332 aaPredicted RBP21.2■□□□□ 0.98
KNOP1-203ENST00000565844 ZNF772Q68DY9 489 aaPredicted RBP21.2■□□□□ 0.98
KNOP1-203ENST00000565844 PUS7Q96PZ0 661 aaKnown RBP21.2■□□□□ 0.98
KNOP1-203ENST00000565844 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
KNOP1-203ENST00000565844 FOXO3O43524 673 aa21.18■□□□□ 0.98
KNOP1-203ENST00000565844 NUDT16Q96DE0 195 aaKnown RBP21.18■□□□□ 0.98
KNOP1-203ENST00000565844 PXDNQ92626 1479 aa21.16■□□□□ 0.98
KNOP1-203ENST00000565844 PPIP5K1Q6PFW1 1433 aa21.16■□□□□ 0.98
KNOP1-203ENST00000565844 COL22A1Q8NFW1 1626 aaPredicted RBP21.15■□□□□ 0.98
KNOP1-203ENST00000565844 KIF1AQ12756 1690 aa21.14■□□□□ 0.97
KNOP1-203ENST00000565844 NPHP3Q7Z494 1330 aa21.14■□□□□ 0.97
KNOP1-203ENST00000565844 MARF1Q9Y4F3 1742 aaKnown RBP21.14■□□□□ 0.97
KNOP1-203ENST00000565844 NINLQ9Y2I6 1382 aa21.13■□□□□ 0.97
KNOP1-203ENST00000565844 TMC1Q8TDI8 760 aa21.13■□□□□ 0.97
KNOP1-203ENST00000565844 CCDC61Q9Y6R9 512 aa21.13■□□□□ 0.97
KNOP1-203ENST00000565844 RXRBP28702 533 aa21.12■□□□□ 0.97
KNOP1-203ENST00000565844 AKAP12Q02952 1782 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms