RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 ESF1Q9H501 851 aaKnown RBP8.6□□□□□ -1.03
CHD9-217ENST00000565832 SLC52A1Q9NWF4 448 aa8.6□□□□□ -1.03
CHD9-217ENST00000565832 DISP3Q9P2K9 1392 aa8.6□□□□□ -1.03
CHD9-217ENST00000565832 CLTCQ00610 1675 aaKnown RBP8.6□□□□□ -1.03
CHD9-217ENST00000565832 ZMYM3Q14202 1370 aa8.59□□□□□ -1.03
CHD9-217ENST00000565832 FXR2P51116 673 aaKnown RBP eCLIP8.59□□□□□ -1.03
CHD9-217ENST00000565832 ZNF467Q7Z7K2 595 aaPredicted RBP8.59□□□□□ -1.03
CHD9-217ENST00000565832 PCDHB8Q9UN66 801 aa8.59□□□□□ -1.03
CHD9-217ENST00000565832 PCDHB13Q9Y5F0 798 aa8.59□□□□□ -1.03
CHD9-217ENST00000565832 MYO5BQ9ULV0 1848 aa8.59□□□□□ -1.03
CHD9-217ENST00000565832 TRAK1Q9UPV9 953 aa8.59□□□□□ -1.03
CHD9-217ENST00000565832 CCDC61Q9Y6R9 512 aa8.59□□□□□ -1.03
CHD9-217ENST00000565832 STAC3Q96MF2 364 aa8.58□□□□□ -1.04
CHD9-217ENST00000565832 PRKRIP1Q9H875 184 aaPredicted RBP8.58□□□□□ -1.04
CHD9-217ENST00000565832 ADGRB3O60242 1522 aa8.58□□□□□ -1.04
CHD9-217ENST00000565832 AGLP35573 1532 aa8.58□□□□□ -1.04
CHD9-217ENST00000565832 ARHGEF40Q8TER5 1519 aa8.58□□□□□ -1.04
CHD9-217ENST00000565832 PREX1Q8TCU6 1659 aa8.58□□□□□ -1.04
CHD9-217ENST00000565832 C14orf93Q9H972 538 aaKnown RBP8.58□□□□□ -1.04
CHD9-217ENST00000565832 REREQ9P2R6 1566 aa8.57□□□□□ -1.04
CHD9-217ENST00000565832 PIK3C2BO00750 1634 aa8.57□□□□□ -1.04
CHD9-217ENST00000565832 ZC3H13Q5T200 1668 aaKnown RBP8.57□□□□□ -1.04
CHD9-217ENST00000565832 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
CHD9-217ENST00000565832 IFT172Q9UG01 1749 aa8.57□□□□□ -1.04
CHD9-217ENST00000565832 TPRNQ4KMQ1 711 aa8.56□□□□□ -1.04
CHD9-217ENST00000565832 RYDENQ9NUL5 291 aaKnown RBP8.56□□□□□ -1.04
CHD9-217ENST00000565832 PPLO60437 1756 aa8.56□□□□□ -1.04
CHD9-217ENST00000565832 CENPBP07199 599 aaPredicted RBP8.56□□□□□ -1.04
CHD9-217ENST00000565832 TMF1P82094 1093 aa8.56□□□□□ -1.04
CHD9-217ENST00000565832 PDAP1Q13442 181 aaKnown RBP8.56□□□□□ -1.04
CHD9-217ENST00000565832 STK26Q9P289 416 aa8.56□□□□□ -1.04
CHD9-217ENST00000565832 ERVK-7P63135 1459 aa8.56□□□□□ -1.04
CHD9-217ENST00000565832 RPGRIP1LQ68CZ1 1315 aa8.56□□□□□ -1.04
CHD9-217ENST00000565832 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
CHD9-217ENST00000565832 SAFB2Q14151 953 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHD9-217ENST00000565832 PIK3C2GO75747 1445 aa8.55□□□□□ -1.04
CHD9-217ENST00000565832 MYOM2P54296 1465 aa8.55□□□□□ -1.04
CHD9-217ENST00000565832 NRXN1Q9ULB1 1477 aa8.55□□□□□ -1.04
CHD9-217ENST00000565832 PANK3Q9H999 370 aa8.55□□□□□ -1.04
CHD9-217ENST00000565832 NEURL4Q96JN8 1562 aa8.55□□□□□ -1.04
CHD9-217ENST00000565832 SCAF11Q99590 1463 aaKnown RBP8.54□□□□□ -1.04
CHD9-217ENST00000565832 TMEM131LA2VDJ0 1609 aa8.54□□□□□ -1.04
CHD9-217ENST00000565832 CHRDL2Q6WN34 429 aa8.54□□□□□ -1.04
CHD9-217ENST00000565832 NEXMIFQ5QGS0 1516 aa8.54□□□□□ -1.04
CHD9-217ENST00000565832 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
CHD9-217ENST00000565832 PER1O15534 1290 aaPredicted RBP8.54□□□□□ -1.04
CHD9-217ENST00000565832 NBR1Q14596 966 aa8.54□□□□□ -1.04
CHD9-217ENST00000565832 LAMC1P11047 1609 aa8.53□□□□□ -1.04
CHD9-217ENST00000565832 IQGAP1P46940 1657 aa8.53□□□□□ -1.04
CHD9-217ENST00000565832 CC2D1BQ5T0F9 858 aaKnown RBP8.52□□□□□ -1.04
CHD9-217ENST00000565832 FAM9BQ8IZU0 186 aa8.52□□□□□ -1.04
CHD9-217ENST00000565832 PIP4P2Q8N4L2 257 aa8.52□□□□□ -1.04
CHD9-217ENST00000565832 PSEN1P49768 467 aa8.52□□□□□ -1.05
CHD9-217ENST00000565832 ZNF579Q8NAF0 562 aaKnown RBP8.52□□□□□ -1.05
CHD9-217ENST00000565832 MRS2Q9HD23 443 aa8.51□□□□□ -1.05
CHD9-217ENST00000565832 A2ML1A8K2U0 1454 aa8.51□□□□□ -1.05
CHD9-217ENST00000565832 KIAA1210Q9ULL0 1709 aa8.51□□□□□ -1.05
CHD9-217ENST00000565832 ADGRB1O14514 1584 aa8.5□□□□□ -1.05
CHD9-217ENST00000565832 SPATA31D1Q6ZQQ2 1576 aa8.5□□□□□ -1.05
CHD9-217ENST00000565832 CENPJQ9HC77 1338 aaPredicted RBP8.5□□□□□ -1.05
CHD9-217ENST00000565832 PAK3O75914 559 aaPredicted RBP8.5□□□□□ -1.05
CHD9-217ENST00000565832 IFNL1Q8IU54 200 aa8.5□□□□□ -1.05
CHD9-217ENST00000565832 GTF3C3Q9Y5Q9 886 aa8.5□□□□□ -1.05
CHD9-217ENST00000565832 TNRQ92752 1358 aa8.49□□□□□ -1.05
CHD9-217ENST00000565832 LTKP29376 864 aa8.49□□□□□ -1.05
CHD9-217ENST00000565832 WAPLQ7Z5K2 1190 aa8.49□□□□□ -1.05
CHD9-217ENST00000565832 SLC12A5Q9H2X9 1139 aa8.49□□□□□ -1.05
CHD9-217ENST00000565832 RIMS2Q9UQ26 1411 aa8.49□□□□□ -1.05
CHD9-217ENST00000565832 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
CHD9-217ENST00000565832 MAP3K13O43283 966 aa8.48□□□□□ -1.05
CHD9-217ENST00000565832 TMC1Q8TDI8 760 aa8.48□□□□□ -1.05
CHD9-217ENST00000565832 PRAM1Q96QH2 718 aa8.48□□□□□ -1.05
CHD9-217ENST00000565832 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
CHD9-217ENST00000565832 CABP2Q9NPB3 220 aa8.48□□□□□ -1.05
CHD9-217ENST00000565832 ZFYVE9O95405 1425 aa8.48□□□□□ -1.05
CHD9-217ENST00000565832 HNRNPUQ00839 825 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHD9-217ENST00000565832 KIF12Q96FN5 646 aa8.47□□□□□ -1.05
CHD9-217ENST00000565832 MFRPQ9BY79 579 aa8.47□□□□□ -1.05
CHD9-217ENST00000565832 MINK1Q8N4C8 1332 aaPredicted RBP8.47□□□□□ -1.05
CHD9-217ENST00000565832 SETBP1Q9Y6X0 1596 aa8.47□□□□□ -1.05
CHD9-217ENST00000565832 ASXL1Q8IXJ9 1541 aa8.46□□□□□ -1.05
CHD9-217ENST00000565832 CDCA8Q53HL2 280 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 CADPS2Q86UW7 1296 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 TXNDC2Q86VQ3 553 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 SLC26A8Q96RN1 970 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 POGKQ9P215 609 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 ALKQ9UM73 1620 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 METP08581 1390 aa8.46□□□□□ -1.06
CHD9-217ENST00000565832 C3P01024 1663 aa8.45□□□□□ -1.06
CHD9-217ENST00000565832 YTHDC2Q9H6S0 1430 aaKnown RBP8.45□□□□□ -1.06
CHD9-217ENST00000565832 TMEM2Q9UHN6 1383 aa8.45□□□□□ -1.06
CHD9-217ENST00000565832 PTPRMP28827 1452 aa8.45□□□□□ -1.06
CHD9-217ENST00000565832 FER1L4A9Z1Z3 1794 aa8.44□□□□□ -1.06
CHD9-217ENST00000565832 PLEKHH1Q9ULM0 1364 aa8.44□□□□□ -1.06
CHD9-217ENST00000565832 RALBP1Q15311 655 aa8.44□□□□□ -1.06
CHD9-217ENST00000565832 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
CHD9-217ENST00000565832 QRICH2Q9H0J4 1663 aa8.44□□□□□ -1.06
CHD9-217ENST00000565832 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
CHD9-217ENST00000565832 SRPK2P78362 688 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms